SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.19g139200

Feature Type:gene_model
Chromosome:Gm19
Start:40494606
stop:40499411
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g139200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G35910.1AT JGI N/AIEA
GO:0002098GO-bp tRNA wobble uridine modification JGI N/AIEA
GO:0034227GO-bp tRNA thio-modification JGI N/AIEA
GO:0000049GO-mf tRNA binding JGI N/AIEA
PTHR20882PantherFam CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 JGI N/AIEA
PTHR20882:SF14PantherFam CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2 JGI N/AIEA
PF10288Pfam Cytoplasmic tRNA 2-thiolation protein 2 JGI N/AIEA

Gene model name correspondences to Glyma.19g139200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g32061 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g139200
>Glyma.19g139200.1 sequence-type=CDS polypeptide=Glyma.19g139200.1.p locus=Glyma.19g139200 id=Glyma.19g139200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTTGGCACTGCAAAAGGTTGCTTCTGAATTTGGGTATAACAGGATCATTCTGGGGTCATGCATTTCGAGGATTGCTTGCCATGTCATTTCAGCCACTGTGAAGGGTCAAGGATACTCATTACCTGCAGATATACAGTATGTTGATGCTAGATGGGAAGTTCCTGTTGTGCTTCCTCTGCGTGATTGTTTTGCCCAAGAGATCAACATGCTATGCCGCCTTGATGGTCTAAAGACTGTAAAGTTGTCTACAGATCTGTGCTCTAGCATTAATGGCCTGGTATCATCTTTTGTGGCTTTGTTGCAGGAAGAAAACCCATCTCGAGAGAGCTCAATTGTAAGAACAGCTGGTAAACTTACTCCCTTCCAATTCAACAGGATTCCAGAGATCATTGATAGTAATGTTCCTTTGACAACTCGAAGATGCCAGAAGAGATATAATCTCAAATCCAATGAATCTGTTTCCTCAGAATCCTTCTGTCCTCTCTGCAACAGCCCACTCGACAAGAGTGAGATTGTTGATTGGAGTAATATTGATAGCCACAGAAGTAGTGATATTTTTTATAATACCTGCTGTTCAAGTTGTCGGTTTCAGATACTTCCAAGTGATTCCACAACAATGGAACAATTTTATATGGATTTTCCTCAGTCAGTGGTCAGCCGACCAAAGCAAGCCAACAATGGTAATTTGAGTCTGCTAAGGAACTTTATGTGTCGACCTTTCTTCAAGACATGA
Predicted protein sequences of Glyma.19g139200
>Glyma.19g139200.1.p sequence-type=predicted peptide transcript=Glyma.19g139200.1 locus=Glyma.19g139200 id=Glyma.19g139200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MLALQKVASEFGYNRIILGSCISRIACHVISATVKGQGYSLPADIQYVDARWEVPVVLPLRDCFAQEINMLCRLDGLKTVKLSTDLCSSINGLVSSFVALLQEENPSRESSIVRTAGKLTPFQFNRIPEIIDSNVPLTTRRCQKRYNLKSNESVSSESFCPLCNSPLDKSEIVDWSNIDSHRSSDIFYNTCCSSCRFQILPSDSTTMEQFYMDFPQSVVSRPKQANNGNLSLLRNFMCRPFFKT*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo