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Report for Sequence Feature Glyma.19g116500

Feature Type:gene_model
Chromosome:Gm19
Start:37193264
stop:37201114
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g116500
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G58030.1AT cationic amino acid transporter 2 JGI N/AIEA
GO:0003333GO-bp amino acid transmembrane transport EnsemblGenomesN/AIEA
GO:0003333GO-bp amino acid transmembrane transport JGI N/AIEA
GO:0006810GO-bp transport JGI N/AIEA
GO:0055085GO-bp transmembrane transport EnsemblGenomesN/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0016020GO-cc membrane EnsemblGenomesN/AIEA
GO:0016020GO-cc membrane JGI N/AIEA
GO:0016021GO-cc integral component of membrane EnsemblGenomesN/AIEA
GO:0015171GO-mf amino acid transmembrane transporter activity EnsemblGenomesN/AIEA
GO:0015171GO-mf amino acid transmembrane transporter activity JGI N/AIEA
GO:0022857GO-mf transmembrane transporter activity EnsemblGenomesN/AIEA
KOG1286 KOG Amino acid transporters JGI N/AIEA
PTHR11785Panther AMINO ACID TRANSPORTER JGI N/AIEA
PTHR11785:SF53Panther JGI N/AIEA
PF00324PFAM Amino acid permease JGI N/AIEA

Expression Patterns of Glyma.19g116500
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g116500 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g29450 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.19g116500
>Glyma.19g116500.2 sequence-type=transcript locus=Glyma.19g116500 ID=Glyma.19g116500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATCAATCAATCGTCTTTGCCAATTCTTGTTCTTGATCTTGACATTGGTCACCAACCATCATCCTCATCATATCTTCACAATAATTTCTCAAGATTTAAAATATAATAATGACACACAAGCAAACACACAATCTGGAATTGAAATTCTTTCTTCTTTTAGAAGGCATCAATTATTTTGCCTGTTTTGTCTATAACGGGAACAACCCCATCACCAAAGGAAGGAGAATTCGATGCTCTATCTGATTCTGTGATTGGAATGCAAGCATATTGATTGGCCACTTGACATTGTTACCCTTTTGATTTGAATGCAAGACTAGTTTAATTGGCCACAACACAATCTTTGTTTTGTACTTTGATCTTGGGACAATCATCATTGATTTGATTTTCCCATTAAGGTAAAAAAAATTGGTTTTGATGGGTGTTTCGGTTGATTCACCGTCACAAAAGGGTTCATGGGATTTCTTGAAGTTTTTAACTAGGAGGAAGCAGGTTGATTCTCCACGTAGGAACTCTCAGCCTCTGCTTGCCAAGGAGTTAACTGTGCTTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTGCTGGTGGGAGCGGTTGCACGGGAGCATGCAGGACCGGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGGTCTCTCTGCATTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGAAGTGCATACCACTATACATACATTTGTCTTGGGGAAGGTGTTGCTTGGTTGATTGGCTGGTCTTTGTTATTGGAATATACAATTGGTAGTGCTGCAGTTGCTCGTGGCGTGACCCCCAATTTGGCTGCACTTTTTGGTGGTGCGGACAATTTACCCATATTTTTGGCCCGACAGCATATTCGTGGAATAGATATTGTTGTGGACCCATGTGCAGCAATCCTGGTATTACTTGTTACTGGACTCTTATGCGTGGGGATCAAGGAGAGTACAGTGGTACAAGGCATAGTGACAGCAGTGAATGTATGTGCATTGCTTTTTGTTATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCAATAGGATTTTTCCCCTTTGGGATTAATGGGATGCTGGCTGGTTCTGCTACAGTATTCTTTGCATATATTGGTTTTGATGCAGTTGCCAGTACTGCTGAAGAGGTTAAAAATCCTCAACGAGATTTACCGCTTGGTATTGGTGGTGCATTGTTTATTTGTTGTGGGATATATATGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCATCTGCATTTGCTAATCAAGGGATGGAATGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGAGGGATACTTCCCCAGCCACGAATTCTGATGTCTATGGCAAGGGATGGGCTTCTGCCACCTTTTTTTTGTGATATAAATAAGCAGACTCAGGTTCCCGTTAAGGGCACAATAGCTACTGGCGTTGTGGCTTCATTCTTGGCTTTTTCTATGGAAGTCTCTCAACTAGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCATGGTGGCAATTTCTGTGTTGATCCTAAGATATATCCCTCCAGACGAAGTCCCATTGCCTCCATCTCTCCAGGATTCAATTGCTTCAGTGTTAAAGCGGTACAGATTGAGCAATGCAGAGACAAATGTGGAATATGCAGATGCAAATGTTGTTTCTTCTGAGTACAGAAAACCTTTAATTATTAAGGAGGATGTTTCAATTGATTTTCCTAAACATCTTGCTGTAGGAAACCTTCTGTTCGCTTCGCATTATGTGGAATTGGCGGTGCTACTCTTCTGTGTGGTTTTGTTTTACTGACCTGTATAGATCAAGATGATGCAAGACATGACTTTGGGCACTCTGGAGGTTTCATTTGCCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTCCTACTTACTAGTTAATCTTGGAGATGGCACATGGTTCCGTGTTTCTATATGGCTGGCAACAGGACTACTAGTTTATGTGTTCTATGGCCGAACCCATAGCTCTCTAAAGGATGCAATTTATGTGCCAGCAAAGCAAGTGGATGAAATTTACCAGAATTACAGAAGCTGTCTTGCTTAATCTCTGCAAACAAAATTTGGCTGATTCTGTGTGTGCCTGTGGGGAGATTGCTTGCATCCCAAGCCAAAGAAAATGTTGCAGCTCCCCCAGTTGAACATGTATTCCCTGTACAGGAAGTGCTTCTCCAGCTTAGGGTCATGTATTTAATTTGTTTTCTTCTAGAGAAGAATGTCATTGTGGTATGCCTTGAATTATATCTCATTTATTCCCCATTGTGTACAATTTGTATGATATATCTTGTGTGACAGTGTGAGTGAGTGACTTGGGGCATGTTCAAGAAAATGTAAATATAGTTTGAAATTTGTAATTTAAATTTTCTTAATTATTCAATCCTTTCATTTTGGAGAA
Coding sequences of Glyma.19g116500
>Glyma.19g116500.1 sequence-type=CDS polypeptide=Glyma.19g116500.1.p locus=Glyma.19g116500 ID=Glyma.19g116500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGTTTCGGTTGATTCACCGTCACAAAAGGGTTCATGGGATTTCTTGAAGTTTTTAACTAGGAGGAAGCAGGTTGATTCTCCACGTAGGAACTCTCAGCCTCTGCTTGCCAAGGAGTTAACTGTGCTTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTGCTGGTGGGAGCGGTTGCACGGGAGCATGCAGGACCGGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGGTCTCTCTGCATTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGAAGTGCATACCACTATACATACATTTGTCTTGGGGAAGGTGTTGCTTGGTTGATTGGCTGGTCTTTGTTATTGGAATATACAATTGGTAGTGCTGCAGTTGCTCGTGGCGTGACCCCCAATTTGGCTGCACTTTTTGGTGGTGCGGACAATTTACCCATATTTTTGGCCCGACAGCATATTCGTGGAATAGATATTGTTGTGGACCCATGTGCAGCAATCCTGGTATTACTTGTTACTGGACTCTTATGCGTGGGGATCAAGGAGAGTACAGTGGTACAAGGCATAGTGACAGCAGTGAATGTATGTGCATTGCTTTTTGTTATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCAATAGGATTTTTCCCCTTTGGGATTAATGGGATGCTGGCTGGTTCTGCTACAGTATTCTTTGCATATATTGGTTTTGATGCAGTTGCCAGTACTGCTGAAGAGGTTAAAAATCCTCAACGAGATTTACCGCTTGGTATTGGTGGTGCATTGTTTATTTGTTGTGGGATATATATGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCATCTGCATTTGCTAATCAAGGGATGGAATGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGAGGGATACTTCCCCAGCCACGAATTCTGATGTCTATGGCAAGGGATGGGCTTCTGCCACCTTTTTTTTGTGATATAAATAAGCAGACTCAGGTTCCCGTTAAGGGCACAATAGCTACTGGCGTTGTGGCTTCATTCTTGGCTTTTTCTATGGAAGTCTCTCAACTAGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCATGGTGGCAATTTCTGTGTTGATCCTAAGATATATCCCTCCAGACGAAGTCCCATTGCCTCCATCTCTCCAGGATTCAATTGCTTCAGTGTTAAAGCGGTACAGATTGAGCAATGCAGAGACAAATGTGGAATATGCAGATGCAAATGTTGTTTCTTCTGAGTACAGAAAACCTTTAATTATTAAGGAGGATGTTTCAATTGATTTTCCTAAACATCTTGCTGTAGGAAACCATCTAAATGAAGGTGATAAGCGAAGAGTTGTTGGGTGGATCATAGCATTCATATGCTTAGGGGAGTTTGTCCTTATATATGCAACTTCAGATTTTACTCTTCTTAGTTCTGTTCGCTTCGCATTATGTGGAATTGGCGGTGCTACTCTTCTGTGTGGTTTTGTTTTACTGACCTGTATAGATCAAGATGATGCAAGACATGACTTTGGGCACTCTGGAGGTTTCATTTGCCCATTTGTGCCACTGCTTCCCATAGCTTGCATTCTCATCAATTCCTACTTACTAGTTAATCTTGGAGATGGCACATGGTTCCGTGTTTCTATATGGCTGGCAACAGGACTACTAGTTTATGTGTTCTATGGCCGAACCCATAGCTCTCTAAAGGATGCAATTTATGTGCCAGCAAAGCAAGTGGATGAAATTTACCAGAATTACAGAAGCTGTCTTGCTTAA

>Glyma.19g116500.2 sequence-type=CDS polypeptide=Glyma.19g116500.2.p locus=Glyma.19g116500 ID=Glyma.19g116500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGTGTTTCGGTTGATTCACCGTCACAAAAGGGTTCATGGGATTTCTTGAAGTTTTTAACTAGGAGGAAGCAGGTTGATTCTCCACGTAGGAACTCTCAGCCTCTGCTTGCCAAGGAGTTAACTGTGCTTCATCTCATTGCAGTTGGTGTTGGTTCAACAATTGGTGCTGGAGTGTATGTGCTGGTGGGAGCGGTTGCACGGGAGCATGCAGGACCGGCTTTGGCCATTTCTTTTCTGATTGCTGGATTAGCAGCTGGTCTCTCTGCATTTTGCTATGCAGAGTTGGCTAGTCGCTGCCCTTCTGCTGGAAGTGCATACCACTATACATACATTTGTCTTGGGGAAGGTGTTGCTTGGTTGATTGGCTGGTCTTTGTTATTGGAATATACAATTGGTAGTGCTGCAGTTGCTCGTGGCGTGACCCCCAATTTGGCTGCACTTTTTGGTGGTGCGGACAATTTACCCATATTTTTGGCCCGACAGCATATTCGTGGAATAGATATTGTTGTGGACCCATGTGCAGCAATCCTGGTATTACTTGTTACTGGACTCTTATGCGTGGGGATCAAGGAGAGTACAGTGGTACAAGGCATAGTGACAGCAGTGAATGTATGTGCATTGCTTTTTGTTATAGCAGCTGGTGGTTACTTGGGATTCAAGTCTGGATGGGTTGGATATGAACTTCCAATAGGATTTTTCCCCTTTGGGATTAATGGGATGCTGGCTGGTTCTGCTACAGTATTCTTTGCATATATTGGTTTTGATGCAGTTGCCAGTACTGCTGAAGAGGTTAAAAATCCTCAACGAGATTTACCGCTTGGTATTGGTGGTGCATTGTTTATTTGTTGTGGGATATATATGATGGTGTCCATTGTTGTAGTTGGTTTAGTACCTTATTATGCAATTGATCCAGATACCCCAATATCATCTGCATTTGCTAATCAAGGGATGGAATGGGCAGCTTACATTATAAATGCTGGTGCTTTCACAGCTCTCTGCTCAGCATTGTTGGGAGGGATACTTCCCCAGCCACGAATTCTGATGTCTATGGCAAGGGATGGGCTTCTGCCACCTTTTTTTTGTGATATAAATAAGCAGACTCAGGTTCCCGTTAAGGGCACAATAGCTACTGGCGTTGTGGCTTCATTCTTGGCTTTTTCTATGGAAGTCTCTCAACTAGCAGGAATGGTTAGTGTGGGTACGCTTTTAGCATTCACCATGGTGGCAATTTCTGTGTTGATCCTAAGATATATCCCTCCAGACGAAGTCCCATTGCCTCCATCTCTCCAGGATTCAATTGCTTCAGTGTTAAAGCGGTACAGATTGAGCAATGCAGAGACAAATGTGGAATATGCAGATGCAAATGTTGTTTCTTCTGAGTACAGAAAACCTTTAATTATTAAGGAGGATGTTTCAATTGATTTTCCTAAACATCTTGCTGTAGGAAACCTTCTGTTCGCTTCGCATTATGTGGAATTGGCGGTGCTACTCTTCTGTGTGGTTTTGTTTTACTGA
Predicted protein sequences of Glyma.19g116500
>Glyma.19g116500.1.p sequence-type=predicted peptide transcript=Glyma.19g116500.1 locus=Glyma.19g116500 ID=Glyma.19g116500.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVSVDSPSQKGSWDFLKFLTRRKQVDSPRRNSQPLLAKELTVLHLIAVGVGSTIGAGVYVLVGAVAREHAGPALAISFLIAGLAAGLSAFCYAELASRCPSAGSAYHYTYICLGEGVAWLIGWSLLLEYTIGSAAVARGVTPNLAALFGGADNLPIFLARQHIRGIDIVVDPCAAILVLLVTGLLCVGIKESTVVQGIVTAVNVCALLFVIAAGGYLGFKSGWVGYELPIGFFPFGINGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFICCGIYMMVSIVVVGLVPYYAIDPDTPISSAFANQGMEWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFCDINKQTQVPVKGTIATGVVASFLAFSMEVSQLAGMVSVGTLLAFTMVAISVLILRYIPPDEVPLPPSLQDSIASVLKRYRLSNAETNVEYADANVVSSEYRKPLIIKEDVSIDFPKHLAVGNHLNEGDKRRVVGWIIAFICLGEFVLIYATSDFTLLSSVRFALCGIGGATLLCGFVLLTCIDQDDARHDFGHSGGFICPFVPLLPIACILINSYLLVNLGDGTWFRVSIWLATGLLVYVFYGRTHSSLKDAIYVPAKQVDEIYQNYRSCLA*

>Glyma.19g116500.2.p sequence-type=predicted peptide transcript=Glyma.19g116500.2 locus=Glyma.19g116500 ID=Glyma.19g116500.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVSVDSPSQKGSWDFLKFLTRRKQVDSPRRNSQPLLAKELTVLHLIAVGVGSTIGAGVYVLVGAVAREHAGPALAISFLIAGLAAGLSAFCYAELASRCPSAGSAYHYTYICLGEGVAWLIGWSLLLEYTIGSAAVARGVTPNLAALFGGADNLPIFLARQHIRGIDIVVDPCAAILVLLVTGLLCVGIKESTVVQGIVTAVNVCALLFVIAAGGYLGFKSGWVGYELPIGFFPFGINGMLAGSATVFFAYIGFDAVASTAEEVKNPQRDLPLGIGGALFICCGIYMMVSIVVVGLVPYYAIDPDTPISSAFANQGMEWAAYIINAGAFTALCSALLGGILPQPRILMSMARDGLLPPFFCDINKQTQVPVKGTIATGVVASFLAFSMEVSQLAGMVSVGTLLAFTMVAISVLILRYIPPDEVPLPPSLQDSIASVLKRYRLSNAETNVEYADANVVSSEYRKPLIIKEDVSIDFPKHLAVGNLLFASHYVELAVLLFCVVLFY*






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