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Report for Sequence Feature Glyma.19g107400

Feature Type:gene_model
Chromosome:Gm19
Start:35897479
stop:35898781
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g107400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G26618.1AT eukaryotic release factor 1-3 JGI N/AIEA
GO:0006415GO-bp translational termination EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0003747GO-mf translation release factor activity EnsemblGenomesN/AIEA
KOG0688 KOG Peptide chain release factor 1 (eRF1) JGI N/AIEA
PTHR10113Panther PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 JGI N/AIEA
PF03463PFAM eRF1 domain 1 JGI N/AIEA
PF03464PFAM eRF1 domain 2 JGI N/AIEA
PF03465PFAM eRF1 domain 3 JGI N/AIEA

Expression Patterns of Glyma.19g107400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g107400 not represented in the dataset
Glyma.19g107400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g107400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g28312 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g107400
>Glyma.19g107400.1 sequence-type=CDS polypeptide=Glyma.19g107400.1.p locus=Glyma.19g107400 ID=Glyma.19g107400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGATGGTGAATCTGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATCAGAGCATTGGAATCTGCAAGAGGTAATGGCACCAGCATGATTTCTCTGATTATGCCCCCACGTGATCAAATATCTCATGTCACTAAGATGCTGGGAGATGAGTTTGGAACTGCTTCAAATATCAAAAGCAGGATGGCAAGGAAAAAAAAGGTGACAATTGATTTTGAACCTTTCAAGCCTATCAATGCATCACTTTACCTCTGTGATAACAAGTTTCACATAGAAGCTCTAAATGAACTTTTAGAATCAGATGACAAGTTTGGTTTTATTATTATGGATGGGAACGACACCCTTTTTGGGACATTAACTGGAAACACTCGTGAGGTGCTTCATAAATTTACTGTTGATCTACCAAAGAAGCATGGTCGAGGAGGGCAGTCAGCATTGTGTTTTGCTTGTCTTCGCATGGAAAAGCGGCACAACTATGTCAGGAACACTGCAGAACTTGCTACTCAGTTTTTCATCAATCCTGCTACTAGTCAACCTAATGTTTCTGGACTTATACTTGCTGGTTCAGTTGGCTTCAAGACTGAGCTGAGCCAGTCAGATATGTTCAATCCTCGTTTGCAAGCAAAAATATTGAATGTGGTTGATGTTTCCTATGGTGGGGAAAATGGTTTTAATCAAGCTATTGAGTTATCCGCGGAGATGTTATCTAATGTGAACACGCTGAAGGCTCTGGAGATGGGTGCTGTGGGAACACTTATTGTGTGGGAAAATTTGGATATTAATAGATATGTACTGAAAAATAGTTCTACTGGTGAGATTGTCATAAAGCACTTGAACAAGGAGCAAGAGGGTAATCAGAGCAACTTCAGAGACTCGCCCACCTCAGCAGAGTTAGAGGTTCAGGAGAAGATGCCCTTGAGTGGATCACAATTTTGCAGAGGGTTTGGTGGTATTGGGGGTATCCTTTGCTACCAGCTCAATATCAGATCGTTTGATGAGTTATCTGATGATGGAGAAGTGTATGAGGATTCCGATTAA
Predicted protein sequences of Glyma.19g107400
>Glyma.19g107400.1.p sequence-type=predicted peptide transcript=Glyma.19g107400.1 locus=Glyma.19g107400 ID=Glyma.19g107400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MADGESDKNIEIWKIKKLIRALESARGNGTSMISLIMPPRDQISHVTKMLGDEFGTASNIKSRMARKKKVTIDFEPFKPINASLYLCDNKFHIEALNELLESDDKFGFIIMDGNDTLFGTLTGNTREVLHKFTVDLPKKHGRGGQSALCFACLRMEKRHNYVRNTAELATQFFINPATSQPNVSGLILAGSVGFKTELSQSDMFNPRLQAKILNVVDVSYGGENGFNQAIELSAEMLSNVNTLKALEMGAVGTLIVWENLDINRYVLKNSSTGEIVIKHLNKEQEGNQSNFRDSPTSAELEVQEKMPLSGSQFCRGFGGIGGILCYQLNIRSFDELSDDGEVYEDSD*






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