Glyma.19g107300

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Report for Sequence Feature Glyma.19g107300

Feature Type:	gene_model
Chromosome:	Gm19
Start:	35879955
stop:	35888760
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.19g107300

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT5G36880.2	AT	acetyl-CoA synthetase	JGI	N/A	IEA
GO:0008152	GO-bp	metabolic process	EnsemblGenomes	N/A	IEA
GO:0008152	GO-bp	metabolic process	JGI	N/A	IEA
GO:0019427	GO-bp	acetyl-CoA biosynthetic process from acetate	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	EnsemblGenomes	N/A	IEA
GO:0003824	GO-mf	catalytic activity	JGI	N/A	IEA
GO:0003987	GO-mf	acetate-CoA ligase activity	EnsemblGenomes	N/A	IEA
GO:0016208	GO-mf	AMP binding	EnsemblGenomes	N/A	IEA
KOG1175	KOG	Acyl-CoA synthetase	JGI	N/A	IEA
PTHR24095	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24095:SF42	Panther		JGI	N/A	IEA
PF00501	PFAM	AMP-binding enzyme	JGI	N/A	IEA
PF11930	PFAM		JGI	N/A	IEA
PWY0-1313	SoyCyc9	acetate conversion to acetyl-CoA	Plant Metabolic Network		ISS
PWY66-21	SoyCyc9	ethanol degradation II	Plant Metabolic Network		ISS
GN7V-67314	SoyCyc9-rxn	acetyl-CoA synthetase (AMP-forming)	Plant Metabolic Network		ISS

Expression Patterns of Glyma.19g107300

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g107300 not represented in the dataset	Glyma.19g107300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.19g107300

Paralog	Evidence	Comments
Glyma.16g044600	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.19g107300 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma19g28300	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.19g107300

Limit To All Plant Sequences

>Glyma.19g107300.2 sequence-type=transcript locus=Glyma.19g107300 ID=Glyma.19g107300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CAGGATTTGTTTTATTAATTAAATTTTTATACACACATTTACAACTATGTCAAGATGATTCCTCTGTCCCATAACCCAGTCTCTGTTCACCTGGGTGGAACACCCTGTGACTCTCTTCACCCAATTACGTTCCATCCAATTCTGAATAAGCCTCGTTCTTCTGCCTCTCTGTTTTggaactgcaaaaggagaaggaagaggaaaagCTCCATTACTATGGCTTCTAATCTCAGAACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCAGGTGCGGGTCACATTTCACACTTGAATGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAATAGATCCATTGAGGATCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGAGATGGGGTGATAAAGTGTGTGATGAAAATTTTGATGTGAGGAAAGGGAATATAAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTTGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTGAACTTCTACAACAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGTGTGAAGAAGGGAGATGCCGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCTTGCGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTTATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGCCTATCTATCTAAAAGATATTGTTGATGCTGCAATCAATGATTCAGCCCAAAATGGGGTCTCTATAGATAAATGCCTAGTTTATGAAAACCCATTGGCAATGAAGAGGGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCGTTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGCACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACAATATTCTACACTGCTCCGACATTGGTGCGGTCTCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACAGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATACTGGATGAGAAAGGTGTTGAAATAGAAGGGGAGTGCAATGGATATTTGTGTGTGAAGAAATCATGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCATTGGAAGAGTTGACGATGTCATCAATGTTAGTGGGCATCGAATTGGCACGGCAGAAGTGGAATCAGCTTTAGTTTCACATCCGCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGCATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTTGTACTCATAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGATAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCGTCTCGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGAAGCCCCAAACTTTGTATTATTATAGGTATGAGAAATGCTAGTAACACACTCCAGTGTACTTTTTTTTAAcgcactcttcattattagttaaagtttattggaaattacaataatttatggacatcactacttatttaatgatccttattcgtgattttgtagtttctaataaattttaaACTTTAGTAGAGTGAATTAGAAAGAATATATTAGAGAAAGTGTTGTTAGTATTCCTTGTAAAGGTATAATAGCCAATGAGAAGTGAGGACAAATTTTGCCTTGTGTATCTGTATTTTTATGGGAATCTTAGTGCATGTGATAAATAATAAATAAATCATCCATATCTCTTATTATTA

Coding sequences of Glyma.19g107300

Limit To All Plant Sequences

>Glyma.19g107300.1 sequence-type=CDS polypeptide=Glyma.19g107300.1.p locus=Glyma.19g107300 ID=Glyma.19g107300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTCCTCTGTCCCATAACCCAGTCTCTGTTCACCTGGGTGGAACACCCTGTGACTCTCTTCACCCAATTACGTTCCATCCAATTCTGAATAAGCCTCGTTCTTCTGCCTCTCTGTTTTGGAACTGCAAAAGGAGAAGGAAGAGGAAAAGCTCCATTACTATGGCTTCTAATCTCAGAACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCAGGTGCGGGTCACATTTCACACTTGAATGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAATAGATCCATTGAGGATCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGAGATGGGGTGATAAAGTGTGTGATGAAAATTTTGATGTGAGGAAAGGGAATATAAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTTGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTGAACTTCTACAACAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGTGTGAAGAAGGGAGATGCCGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCTTGCGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTTATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGCCTATCTATCTAAAAGATATTGTTGATGCTGCAATCAATGATTCAGCCCAAAATGGGGTCTCTATAGATAAATGCCTAGTTTATGAAAACCCATTGGCAATGAAGAGGGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCGTTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGCACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACAATATTCTACACTGCTCCGACATTGGTGCGGTCTCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACAGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATACTGGATGAGAAAGGTGTTGAAATAGAAGGGGAGTGCAATGGATATTTGTGTGTGAAGAAATCATGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCATTGGAAGAGTTGACGATGTCATCAATGTTAGTGGGCATCGAATTGGCACGGCAGAAGTGGAATCAGCTTTAGTTTCACATCCGCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGCATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTTGTACTCATAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGATAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCGTCTCGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA

>Glyma.19g107300.2 sequence-type=CDS polypeptide=Glyma.19g107300.2.p locus=Glyma.19g107300 ID=Glyma.19g107300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGATTCCTCTGTCCCATAACCCAGTCTCTGTTCACCTGGGTGGAACACCCTGTGACTCTCTTCACCCAATTACGTTCCATCCAATTCTGAATAAGCCTCGTTCTTCTGCCTCTCTGTTTTGGAACTGCAAAAGGAGAAGGAAGAGGAAAAGCTCCATTACTATGGCTTCTAATCTCAGAACCAACAATTTCCTGCGCCATGTGGAATCAATGAAGCTTCTTCCATCAGGTGCGGGTCACATTTCACACTTGAATGCTGTGATACTTGGTGAATCTCTCGCCACTGAAGAGGATGATTTCGTTCTTCCAAGTGAGGACTTTGCTAGCCAAGCCAATGTTCAGTCCCCAGAACAGTATCTGAAGATGTATAATAGATCCATTGAGGATCCTGCTGGATTCTGGTCTGAGATTGCCTCAGAGTTCTATTGGAAACAGAGATGGGGTGATAAAGTGTGTGATGAAAATTTTGATGTGAGGAAAGGGAATATAAAGATTGAGTGGTTCAAGGGTGGCATCACCAACATCTGTTATAATTGCTTGGATAGAAATGTTGAAGCTGGACTTGGTGACAAGGTTGCCATTTACTGGGAAGGCAATGAGCCTGGTTTGGATGGTACTTTGACATACACTGAACTTCTACAACAAGTTTGCCAGCTTGCAAACTACCTTAAAGATATTGGTGTGAAGAAGGGAGATGCCGTAATTATTTATTTGCCCATGCTTATGGAGCTTCCCATCGCAATGCTTGCTTGCGCCCGGATTGGTGCTGTTCATTCGGTTGTATTTGCTGGTTTTTCTGCAGAAGCTCTTTCCCAGAGAATCATTGATTGTAAACCAAAAGTTGTTATTACTTGCAATGCTGTTAAAAGGGGCCCTAAGCCTATCTATCTAAAAGATATTGTTGATGCTGCAATCAATGATTCAGCCCAAAATGGGGTCTCTATAGATAAATGCCTAGTTTATGAAAACCCATTGGCAATGAAGAGGGTAGATACCAAATGGAAGGAAGGGCGTGATATATGGTGGCAGGATGTCATTCCTCAATATCCAACTACTTGTCCGTTGGAGTGGGTTGATGCAGAGGATCCACTTTTTCTACTCTATACAAGTGGGAGCACAGGAAAACCTAAGGGTGTCCTCCATACAACTGGTGGTTACATGGTGTACACTGCAACAACATTTAAGTATGCATTTGACTACAAGCCGTCTGACATCTACTGGTGTACAGCTGATTGTGGTTGGATTACTGGGCACAGCTATGTCACTTATGGACCCATGCTCAATGGTGCATCTGTTATTGTGTATGAAGGGGCTCCTAATTATCCTGATGCTGGGAGATGTTGGGACATTGTTGACAAATATAAGGTGACAATATTCTACACTGCTCCGACATTGGTGCGGTCTCTCATGCGTGATGGTGATGCGTTTGTTACTCGCTACTCAAGGAAATCTTTACGAGTCCTAGGAAGTGTAGGTGAGCCCATAAATCCAAGTGCATGGAGGTGGTTTTACAATGTAGTTGGAGATTCAAGGTGCCCTATCTCTGACACTTGGTGGCAAACAGAAACAGGTGGCTTCATGATAACTCCACTACCAGGTGCTTGGCCCCAGAAACCTGGTTCTGCAACTTTCCCTTTCTTTGGAGTTCAGCCTGTCATACTGGATGAGAAAGGTGTTGAAATAGAAGGGGAGTGCAATGGATATTTGTGTGTGAAGAAATCATGGCCTGGGGCATTCAGAACTCTGTATGGTGATCATGAAAGATATGAAACAACATATTTCAAGCCATTTGCCGGATACTATTTCAGTGGTGATGGTTGCAGCAGGGATAAAGATGGATACCATTGGCTCATTGGAAGAGTTGACGATGTCATCAATGTTAGTGGGCATCGAATTGGCACGGCAGAAGTGGAATCAGCTTTAGTTTCACATCCGCAATGTGCAGAGGCTGCTGTGGTTGGTGTGGAGCATGAGGTCAAAGGACAGGGCATCTATGCATTTGTTACAGTTGTGGATGGTGTTCCTTACAGTGAAGAACTGCGGAAGGACCTTGTACTCATAGTTCGAAAGCAGATAGGAGCCTTTGCAGCACCTGATAAAATTCATTGGGCACCTGGCCTTCCAAAAACAAGGAGTGGAAAGATAATGCGAAGAATTCTGAGAAAAATTGCGTCTCGGCAGCTGGATGAACTTGGAGATACAAGTACCCTTGCAGATCCAAATGTGGTCAATCAACTTATAGAACTTGCAGATTCTTGA

Predicted protein sequences of Glyma.19g107300

Limit To All Plant Sequences

>Glyma.19g107300.1.p sequence-type=predicted peptide transcript=Glyma.19g107300.1 locus=Glyma.19g107300 ID=Glyma.19g107300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MIPLSHNPVSVHLGGTPCDSLHPITFHPILNKPRSSASLFWNCKRRRKRKSSITMASNLRTNNFLRHVESMKLLPSGAGHISHLNAVILGESLATEEDDFVLPSEDFASQANVQSPEQYLKMYNRSIEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYTELLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALSQRIIDCKPKVVITCNAVKRGPKPIYLKDIVDAAINDSAQNGVSIDKCLVYENPLAMKRVDTKWKEGRDIWWQDVIPQYPTTCPLEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVILDEKGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLIGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEELRKDLVLIVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS*

>Glyma.19g107300.2.p sequence-type=predicted peptide transcript=Glyma.19g107300.2 locus=Glyma.19g107300 ID=Glyma.19g107300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MIPLSHNPVSVHLGGTPCDSLHPITFHPILNKPRSSASLFWNCKRRRKRKSSITMASNLRTNNFLRHVESMKLLPSGAGHISHLNAVILGESLATEEDDFVLPSEDFASQANVQSPEQYLKMYNRSIEDPAGFWSEIASEFYWKQRWGDKVCDENFDVRKGNIKIEWFKGGITNICYNCLDRNVEAGLGDKVAIYWEGNEPGLDGTLTYTELLQQVCQLANYLKDIGVKKGDAVIIYLPMLMELPIAMLACARIGAVHSVVFAGFSAEALSQRIIDCKPKVVITCNAVKRGPKPIYLKDIVDAAINDSAQNGVSIDKCLVYENPLAMKRVDTKWKEGRDIWWQDVIPQYPTTCPLEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPSDIYWCTADCGWITGHSYVTYGPMLNGASVIVYEGAPNYPDAGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDAFVTRYSRKSLRVLGSVGEPINPSAWRWFYNVVGDSRCPISDTWWQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVILDEKGVEIEGECNGYLCVKKSWPGAFRTLYGDHERYETTYFKPFAGYYFSGDGCSRDKDGYHWLIGRVDDVINVSGHRIGTAEVESALVSHPQCAEAAVVGVEHEVKGQGIYAFVTVVDGVPYSEELRKDLVLIVRKQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIASRQLDELGDTSTLADPNVVNQLIELADS*

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