SoyBase
SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research
SoyBase
SoyBase transitions to NEW site on 10/1/2024
|
A previous version of this gene model can be found here:
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|---|---|---|---|---|
| AT4G01070.1 | AT | UDP-Glycosyltransferase superfamily protein | JGI | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | EnsemblGenomes | N/A | IEA |
| GO:0008152 | GO-bp | metabolic process | JGI | N/A | IEA |
| GO:0043231 | GO-cc | intracellular membrane-bounded organelle | EnsemblGenomes | N/A | IEA |
| GO:0016740 | GO-mf | transferase activity | EnsemblGenomes | N/A | IEA |
| GO:0016757 | GO-mf | transferase activity, transferring glycosyl groups | EnsemblGenomes | N/A | IEA |
| GO:0016758 | GO-mf | transferase activity, transferring hexosyl groups | EnsemblGenomes | N/A | IEA |
| GO:0016758 | GO-mf | transferase activity, transferring hexosyl groups | JGI | N/A | IEA |
| GO:0080043 | GO-mf | quercetin 3-O-glucosyltransferase activity | EnsemblGenomes | N/A | IEA |
| GO:0080044 | GO-mf | quercetin 7-O-glucosyltransferase activity | EnsemblGenomes | N/A | IEA |
| KOG1192 | KOG | UDP-glucuronosyl and UDP-glucosyl transferase | JGI | N/A | IEA |
| PTHR11926 | Panther | GLUCOSYL/GLUCURONOSYL TRANSFERASES | JGI | N/A | IEA |
| PTHR11926:SF15 | Panther | JGI | N/A | IEA | |
| PF00201 | PFAM | UDP-glucoronosyl and UDP-glucosyl transferase | JGI | N/A | IEA |
| GN7V-50191 | SoyCyc9-rxn | hydroquinone glucosyltransferase | Plant Metabolic Network | ISS |
|
Glyma.19g102800 not represented in the dataset |
Glyma.19g102800 not represented in the dataset |
| Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|---|---|---|
| Glyma19g27600 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.19g102800.1 sequence-type=CDS polypeptide=Glyma.19g102800.1.p locus=Glyma.19g102800 ID=Glyma.19g102800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGCCAAAACAACTCATATAGCAGTATTCACAATCCCCGTTTTTACCCACCAAGCCTCCATCATAGAGTTATGCAAAAGACTCCATCTCCATCACCACTTCCATATCACATGCATCTTCCCCACCATCAATTCACCAATTCTCTCCACCACCATGTTACTCAAATCTCTTCCTTCCACCGCCATTAGCCACATTTTTCTTCCTCCGGTGAACGAACAAGACCTACCCCATCAAGACGTTTCCCCACAAACCAAAGTCCAACTCGCAGTGTCTCAATCCATGCAATCTTTTCGCGACACTTTGGCTTCGCTTCGTGCAAGTTCAACCACGCCACCACTCGCTGCTTTGGTTGTTGATGCTTTTGCAAATGAAGCGCTAGAAATAGCGAAGGAGTTCGACCTAGCGTCGTATGTGTACATCGTTACTTCTGCCATGACGCTCTCGCTATTGTTGCATTTGCCAACGTTGCATGAAGAAGTTGCATGCGAATACAAGGATTGCGTAGAGGGTATTCGAATTCCGGGTTGCGTCTCTATTCAAGGTCGTGATCTCCCTGATGATTTTCAAGACCGATCTAGCTTTGCTTACGAGTTGATTCTTCAGCGTAGCAAGAGGTTTGATCTTGCTTGTGGGTTCTTAGTTAATAGCTTCTGTGAAATGGAGGAGAATGTTGTGACAGCCTTTCATGAAGATGGTAAAGTGAATGTTCCTATTTACCTTGTTGGGCCAGTCATTCAAACTGGGCCAAGTAGTGAGTCGAATGGAAACTCAGAATGTTTGAGCTGGTTAGAAAACCAAATGCCTAACTCAGTTTTGTATGTCTCCTTTGGAAGTGTATGTGCTCTCACTCAACAACAGATTAATGAGCTTGCTTTGGGGTTAGAGTTGAGTGGTAAAAAATTCTTATGGGTATTTAGAGCACCTAGTGATGTTGATGTTAAAAATGATGACCCTTTAAAGTTTTTGCCACATGGGTTCTTGGAGAGGACCAAAGAGCAAGGGTTGGTTATTACTTCTTGGGCACCTCAAACCCAAATCCTTAGTCACACTTCCACTGGTGGATTTGTGACCCATTGTGGTTGGAATTCAACAGTTGAGAGCATTGTTGCTGGTGTGCCAATGATAACTTGGCCATTGTGTGCTGAGCAAAGAATGAATGCTGCTTTGGTAACTGAGGGACTCAGAGTGGGGTTAAGGCCCAAATTTAGAGAGAATGATGGCATAGTGGAAAAAGAAGAAACTGCTAAGGTGGTTAAAAATTTGTTGGGTGATGAAGGAAAAGGGATTCGCCAAAGAATTGGAAAGCTCAAAGATGCTGCTGCTGATGCTTTGAAAGAACATGGGCGCTCTACAAGCGCACTTTTCCAATTTGTCACTCAATTGGAAAACTGA
>Glyma.19g102800.1.p sequence-type=predicted peptide transcript=Glyma.19g102800.1 locus=Glyma.19g102800 ID=Glyma.19g102800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MAKTTHIAVFTIPVFTHQASIIELCKRLHLHHHFHITCIFPTINSPILSTTMLLKSLPSTAISHIFLPPVNEQDLPHQDVSPQTKVQLAVSQSMQSFRDTLASLRASSTTPPLAALVVDAFANEALEIAKEFDLASYVYIVTSAMTLSLLLHLPTLHEEVACEYKDCVEGIRIPGCVSIQGRDLPDDFQDRSSFAYELILQRSKRFDLACGFLVNSFCEMEENVVTAFHEDGKVNVPIYLVGPVIQTGPSSESNGNSECLSWLENQMPNSVLYVSFGSVCALTQQQINELALGLELSGKKFLWVFRAPSDVDVKNDDPLKFLPHGFLERTKEQGLVITSWAPQTQILSHTSTGGFVTHCGWNSTVESIVAGVPMITWPLCAEQRMNAALVTEGLRVGLRPKFRENDGIVEKEETAKVVKNLLGDEGKGIRQRIGKLKDAAADALKEHGRSTSALFQFVTQLEN*
| Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||
|
|
|
