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Report for Sequence Feature Glyma.19g100200

Feature Type:gene_model
Chromosome:Gm19
Start:35216082
stop:35219621
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g100200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G12820.1AT AFB3 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
KOG1947 KOG Leucine rich repeat proteins, some proteins contain F-box JGI N/AIEA
PTHR24006PantherFam UBIQUITIN CARBOXYL-TERMINAL HYDROLASE JGI N/AIEA
PF12937Pfam F-box-like JGI N/AIEA
PF13516Pfam Leucine Rich repeat JGI N/AIEA

Proteins Associated with Glyma.19g100200
LocusGene SymbolProtein Name
AFB3A auxin signaling F-box 3 protein
AFB2 AUXIN SIGNALING F-BOX 2

Gene model name correspondences to Glyma.19g100200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g27280 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g100200
>Glyma.19g100200.1 sequence-type=CDS polypeptide=Glyma.19g100200.1.p locus=Glyma.19g100200 id=Glyma.19g100200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATGAATTATTTCCCCGACGAGGTAATAGAGCACATATTTGACTATGTGGTGTCACACAGTGACAGAAATGCTTTGTCTTTGGTGTGCAAAAGTTGGTACAGAATAGAGAGGTGTACGAGGCAAAGGGTGTTCATAGGGAACTGTTACTCCATCACTCCAGAGAGGTTGATCCAGAGGTTTCCTGGTCTAAAGTCTTTGACTTTGAAGGGAAAGCCTCATTTTGCTGACTTCAGTTTGGTGCCTTATGATTGGGGTGGCTTTGTGCATCCATGGGTTGAGGCACTGGCCAAGAGCAGGGTTGGTTTGGAGGAGCTTAGGCTCAAGAGGATGGTGGTCTCGGATGAGAGCCTGGAGCTACTTTCTCGTTCTTTCACACACTTCAAGTCTTTGGTTCTTGTTAGCTGTGAAGGGTTCTCTACCGATGGCCTTGCTGCTATAGCTGCAAATTGCAGGTTCCTTAGGGAGCTGGATCTGCAAGAAAATGAAGTTGAGGATCACAAAGGCCAATGGCTAAGTTGCTTTCCTGATAACTGCACATCACTTGTTTCTCTTAATTTTGCTTGCCTTAAAGGAGAGGTTAGTTTGGGAGCACTAGAGAGATTTGTGGCCAGATCTCCTAACCTGAAGAGTTTAAAGCTGAATCGTTCGGTGCCCGTTGATGCACTGCAAAGGATAATGATGCGAGCACCTCAACTATCGGATTTGGGTATTGGATCACTTGTCCATGATCCAGAATCGGAGGCCTACATAAAGCTTAAGAATACCATTCTCAAGTGCAAGTCCATAACCAGTTTGTCTGGGTTTTTGGAAGTTGCTCCTCATTGTCTTGCAGCTATATATCCTATTTGCCCGAACTTAACATCTTTGAACTTGAGCTATGCAGCAGGCATTCAGGGAAGTGCTCTGGTAAAACTAATTCATCACTGTGTTAAACTTCAGCGCTTATGGATAATGGATTGCATTGGAGACAAAGGACTAGGTGTTGTAGCTACGACATGTAAAGATTTGCAAGAATTGAGGGTTTTTCCATCTGTTCCCTTTGGGGATCCAGCAGCTGTCACAGAAAAAGGGCTGGTTGCAATATCAATGGGCTGCCCTAAGCTTCACTCGTTACTCTACTTCTGCCACCAGATGACAAATGCTGCACTCATAACAGTGGCTAAGAACTGCCCAAATTTTATTCGATTCAGGTTGTGTATCCTTGATGCAACAAAACCTGACCCTGATACAATGCAGCCACTGGACGAAGGTTTTGGCGCAATTGTGCAGTCTTGCAGGCGACTCAGGCGCCTATCTCTCTCGGGGAAATTGACTGACCAGGTTTTCCTTTACATAGGAATGTATGCTGAGAAACTTGAAATGCTGTCTATTGCATTTGCTGGGGATGGTGACAAGGGAATGCTGTATGTGTTGAATGGATGCAAGAAGCTTAGGAAGCTTGAGATAAGAGACTGCCCTTTTGGCGACATGGCACTTCTGACGGACGTAGGGAAGTATGAAACAATGCGATCCCTTTGGATGTCGTCCTGTGAAGTGACTGTCGGAGCCTGCAAGTTGCTAGCCAAGAAGATGCCAAGGTTGAATGTGGAGATCTTCAATGAAAACGAGCAAGAAGATTGTAGTCTGGAAGATGGGCAGAAGGTAGAGAAGATGTATTTGTATCGTACATTGGCTGGGAAAAGGAAAGATGCACCAGAATATGTATGGACTCTGTAG
Predicted protein sequences of Glyma.19g100200
>Glyma.19g100200.1.p sequence-type=predicted peptide transcript=Glyma.19g100200.1 locus=Glyma.19g100200 id=Glyma.19g100200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MMNYFPDEVIEHIFDYVVSHSDRNALSLVCKSWYRIERCTRQRVFIGNCYSITPERLIQRFPGLKSLTLKGKPHFADFSLVPYDWGGFVHPWVEALAKSRVGLEELRLKRMVVSDESLELLSRSFTHFKSLVLVSCEGFSTDGLAAIAANCRFLRELDLQENEVEDHKGQWLSCFPDNCTSLVSLNFACLKGEVSLGALERFVARSPNLKSLKLNRSVPVDALQRIMMRAPQLSDLGIGSLVHDPESEAYIKLKNTILKCKSITSLSGFLEVAPHCLAAIYPICPNLTSLNLSYAAGIQGSALVKLIHHCVKLQRLWIMDCIGDKGLGVVATTCKDLQELRVFPSVPFGDPAAVTEKGLVAISMGCPKLHSLLYFCHQMTNAALITVAKNCPNFIRFRLCILDATKPDPDTMQPLDEGFGAIVQSCRRLRRLSLSGKLTDQVFLYIGMYAEKLEMLSIAFAGDGDKGMLYVLNGCKKLRKLEIRDCPFGDMALLTDVGKYETMRSLWMSSCEVTVGACKLLAKKMPRLNVEIFNENEQEDCSLEDGQKVEKMYLYRTLAGKRKDAPEYVWTL*






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