|
A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT2G24200.1 | AT | Cytosol aminopeptidase family protein | JGI | N/A | IEA |
GO:0006508 | GO-bp | proteolysis | EnsemblGenomes | N/A | IEA |
GO:0006508 | GO-bp | proteolysis | JGI | N/A | IEA |
GO:0019538 | GO-bp | protein metabolic process | EnsemblGenomes | N/A | IEA |
GO:0005622 | GO-cc | intracellular | EnsemblGenomes | N/A | IEA |
GO:0005622 | GO-cc | intracellular | JGI | N/A | IEA |
GO:0005737 | GO-cc | cytoplasm | EnsemblGenomes | N/A | IEA |
GO:0004177 | GO-mf | aminopeptidase activity | EnsemblGenomes | N/A | IEA |
GO:0004177 | GO-mf | aminopeptidase activity | JGI | N/A | IEA |
GO:0008235 | GO-mf | metalloexopeptidase activity | EnsemblGenomes | N/A | IEA |
GO:0030145 | GO-mf | manganese ion binding | EnsemblGenomes | N/A | IEA |
KOG2597 | KOG | Predicted aminopeptidase of the M17 family | JGI | N/A | IEA |
PTHR11963 | Panther | LEUCINE AMINOPEPTIDASE-RELATED | JGI | N/A | IEA |
PF00883 | PFAM | Cytosol aminopeptidase family, catalytic domain | JGI | N/A | IEA |
PF02789 | PFAM | Cytosol aminopeptidase family, N-terminal domain | JGI | N/A | IEA |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma19g22730 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.19g077800.1 sequence-type=CDS polypeptide=Glyma.19g077800.1.p locus=Glyma.19g077800 ID=Glyma.19g077800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGCACCCAAAGATGGCGTCATCCATAGTTGCTTCCTCCTCCTCATTCTCCTCTATTCTCACCACTCAATTTCTCACTCCCTCTTCATTTTCTTCTCTCTTTCTCAAAACCCTCACTTTAAGGTCCTCCACGCCGTTTCAGCGTCTTTCTTTTGCGTCACAACCACTGCGCAGGCTCATGGCTCGCGCCACCCTCGGCCTCACTCTCCCAGCCAACACCGAATCCCTTAAGGTTTCTTTCGCGGCAAAGGAGCTTGACGTGGCGGAATGGAAAGGGGACCTTCTCGCCGTTGGCGTAACGGAGAAGGACGTCGCGAGAAACGTGGAATCGAGATTCGAGAACGCGATTCTGAGCGCGTTGGACTCCAAGCTGGGCGGGTTGTTGGGCCAGGTCTCGTCCGAAGAGGACTTCAGCGGCAAACTTGGGCAGTCCACGGTTCTAAGAATCGCTTCCGGACTCGGATTCAAGCGCGTCGCCTTGCTTGGCCTCGGCGCCTCCGCGTCCACCACCTCCGCGTTCAAGTCCCTCGGCGAGGCCGTTGCCGCTGCCGCCAAGTCCGCCCAGGCCGGCCACGTCGCCGTCGCGCTTGCCTCTCCCGACGCACTCTCCACCGAGTCTAAGCCTAAAACAGCGTCCGCAATCGCATCTGGGACTTTGCTGGGAACTTTTGAGGATAACAGGTACAAGTCAGAGTCGAAGAAATCAGTGCTTAGTTCGGTGGATATTATTGGGCTTGGAACTGGACCTGAATTGGAGAAGAAACTTAAGTATGCAGCTGACATTTCTTCTGGAATCATTCTCGGAAGGGAGCTTGTGAATTCTCCGGCTAATGTGCTCACGCCAGGGGTATTGGCTGAAGAGGCATCAAAGATTGCTTCAACATATAATGATGTTTTTACTGCCAAAATATTAGATGCTGAGCAGTGTAAAGAATTGAAAATGGGGTCCTATCTTGGTGTTGCTGCAGCCTCAGCAAATCCTCCTCATTTTATCCATCTGTGTTATAAACCACCAACTGGACCTGTCAATGTCAAGTTAGCATTAGTCGGAAAAGGTTTGACTTTTGATAGTGGTGGCTACAACATCAAGACAGGACCTGGCTGTTTGATTGAACTTATGAAATTTGATATGGGCGGTTCTGCTGCAGTTTTTGGAGCAGCAAAAGCTCTAGGTCAGATCAAACCTCTTGGAGTGGAGGTTCATTTTATAGTTGCAGCTTGTGAGAATATGATAAGTGGAACAGGTATGAGGCCTGGAGATATTGTCACAGCTTCAAATGGAAAGACTATAGAGGTTAATAACACAGATGCAGAGGGTAGGCTTACCCTGGCAGATGCTCTGGTGTATGCTTGTAACCAGGGTGCTGAAAAGATAGTTGACCTGGCAACATTAACTGGGGCCTGCATAATTGGTCTTGGATCCTCAATTGCAGGTGTGTTTACACCAAGTGATGACCTGGCAAAAGAAGTTTTTGATGCTTCTGAAGCGAGTGGGGAGAAACTATGGAGGTTGCCGTTAGAAGAAAGTTACTGGGAGTCAATGAAATCAGGAGTAGCTGATATGGTGAACACTGGTGGTCGACCAGGTAGTGCTATTACTGCGGCTCTTTTCTTAAAGCAGTTTGTTGACGAGAAGGTTCAATGGATGCATATTGACATGGCTGGTCCGGTGTGGAATGAAAAGCAGCGCTGTGCAACAGGATTTGGTGTTGCTACTTTGGTGGAATGGGTTTTGAGGAACGCATCTTAA
>Glyma.19g077800.1.p sequence-type=predicted peptide transcript=Glyma.19g077800.1 locus=Glyma.19g077800 ID=Glyma.19g077800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MHPKMASSIVASSSSFSSILTTQFLTPSSFSSLFLKTLTLRSSTPFQRLSFASQPLRRLMARATLGLTLPANTESLKVSFAAKELDVAEWKGDLLAVGVTEKDVARNVESRFENAILSALDSKLGGLLGQVSSEEDFSGKLGQSTVLRIASGLGFKRVALLGLGASASTTSAFKSLGEAVAAAAKSAQAGHVAVALASPDALSTESKPKTASAIASGTLLGTFEDNRYKSESKKSVLSSVDIIGLGTGPELEKKLKYAADISSGIILGRELVNSPANVLTPGVLAEEASKIASTYNDVFTAKILDAEQCKELKMGSYLGVAAASANPPHFIHLCYKPPTGPVNVKLALVGKGLTFDSGGYNIKTGPGCLIELMKFDMGGSAAVFGAAKALGQIKPLGVEVHFIVAACENMISGTGMRPGDIVTASNGKTIEVNNTDAEGRLTLADALVYACNQGAEKIVDLATLTGACIIGLGSSIAGVFTPSDDLAKEVFDASEASGEKLWRLPLEESYWESMKSGVADMVNTGGRPGSAITAALFLKQFVDEKVQWMHIDMAGPVWNEKQRCATGFGVATLVEWVLRNAS*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||