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Report for Sequence Feature Glyma.19g075600

Feature Type:gene_model
Chromosome:Gm19
Start:27307550
stop:27313078
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g075600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G14240.1AT Thioredoxin superfamily protein JGI N/AIEA
GO:0008616GO-bp queuosine biosynthetic process EnsemblGenomesN/AIEA
GO:0005737GO-cc cytoplasm EnsemblGenomesN/AIEA
GO:0008479GO-mf queuine tRNA-ribosyltransferase activity EnsemblGenomesN/AIEA
KOG3170 KOG Conserved phosducin-like protein JGI N/AIEA
PTHR21148Panther PHOSDUCIN-RELATED JGI N/AIEA
PTHR21148:SF1Panther VIRAL IAP-ASSOCIATED FACTOR HOMOLOG JGI N/AIEA
PF02114PFAM Phosducin JGI N/AIEA

Expression Patterns of Glyma.19g075600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g075600 not represented in the dataset
Glyma.19g075600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g075600 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g22440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g075600
>Glyma.19g075600.1 sequence-type=CDS polypeptide=Glyma.19g075600.1.p locus=Glyma.19g075600 ID=Glyma.19g075600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGCGATTACCATTTCGTGTACAAGGATTTAGAAGGAGCCTCTACTCAATGGGATGATATTCAGAGAAAGCTCGGAAATTTGCCTCCGAAGGCACCAGCTTTCAAGCCCCCACCTTTCACCCCTGATGCCTCTGATGATCAACCCAAAGACAAAACATGGATTGATTCCAAAACCTCGGAGGAACTCGAAGACCTCGAAGATGACCTCGACGACGATCGCTTCCTCCAAGAATATAGGAAGAAGAGGCTGGCTGAGATGCAAGAGGCAGCAAAAGTATTGAGGTTTGGGTCAGTGATTCTCATTTCAGGATCTGATTTTGTTCGGGAGGTGTCACAAGCTCCATCTGATGTTTGGGTGGTTGTCATCCTATACAAAGAAGGGATTCCTGAATGTGGGTTGTTGATGCAAAGCATTGAAGAATTGGCAGTAAGATATCCTTCAACAAAATTTGTGAAGATAATATCTACTGATTGCATACCGAACTACCCGGATCGGAATCTTCCCACTTTGTTGGTGTACAACAACGGAGCAGTCAAAGGAAATTATGTGGGTTTGCATAGTTTCGGGCGAAGATGCACTCCTGAAGGTGTTGCATTAGTGTTGTGCCAATCAGATCCTGTACTTAATGATGGTCATAATGGAAATGAGGCTATTATTGAAGGAGTCCGCAAACGGTTTATAGAGAAAGTTGTTGCTGATCATGAAGAGGGTGATGATGATTACTCTAGTGATTAA
Predicted protein sequences of Glyma.19g075600
>Glyma.19g075600.1.p sequence-type=predicted peptide transcript=Glyma.19g075600.1 locus=Glyma.19g075600 ID=Glyma.19g075600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGDYHFVYKDLEGASTQWDDIQRKLGNLPPKAPAFKPPPFTPDASDDQPKDKTWIDSKTSEELEDLEDDLDDDRFLQEYRKKRLAEMQEAAKVLRFGSVILISGSDFVREVSQAPSDVWVVVILYKEGIPECGLLMQSIEELAVRYPSTKFVKIISTDCIPNYPDRNLPTLLVYNNGAVKGNYVGLHSFGRRCTPEGVALVLCQSDPVLNDGHNGNEAIIEGVRKRFIEKVVADHEEGDDDYSSD*






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