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Report for Sequence Feature Glyma.19g051900

Feature Type:gene_model
Chromosome:Gm19
Start:8468452
stop:8468778
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g051900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATCG00830.1AT ribosomal protein L2 JGI N/AIEA
GO:0002181GO-bp cytoplasmic translation EnsemblGenomesN/AIEA
GO:0006412GO-bp translation EnsemblGenomesN/AIEA
GO:0006412GO-bp translation JGI N/AIEA
GO:0005622GO-cc intracellular EnsemblGenomesN/AIEA
GO:0005840GO-cc ribosome EnsemblGenomesN/AIEA
GO:0005840GO-cc ribosome JGI N/AIEA
GO:0009507GO-cc chloroplast EnsemblGenomesN/AIEA
GO:0009536GO-cc plastid EnsemblGenomesN/AIEA
GO:0015934GO-cc large ribosomal subunit EnsemblGenomesN/AIEA
GO:0022625GO-cc cytosolic large ribosomal subunit EnsemblGenomesN/AIEA
GO:0003723GO-mf RNA binding EnsemblGenomesN/AIEA
GO:0003735GO-mf structural constituent of ribosome EnsemblGenomesN/AIEA
GO:0003735GO-mf structural constituent of ribosome JGI N/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
PTHR13691Panther RIBOSOMAL PROTEIN L2 JGI N/AIEA
PTHR13691:SF5Panther 54S RIBOSOMAL PROTEIN RML2, MITOCHONDRIAL JGI N/AIEA
PF03947PFAM Ribosomal Proteins L2, C-terminal domain JGI N/AIEA

Expression Patterns of Glyma.19g051900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g051900 not represented in the dataset
Glyma.19g051900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g051900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g07186 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g051900
>Glyma.19g051900.1 sequence-type=CDS polypeptide=Glyma.19g051900.1.p locus=Glyma.19g051900 ID=Glyma.19g051900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCTTTGTAAGAAGCTTGTACAGTTTGGGAAGAGGTTTTTAGCTACAGTAGGAGGTGCTATAGCGAAACTAATTACAAAAGAGGGGAAATCGGCCACATTAAAATTACCTTCTGGGGAGGTCCGTTTGGGAAATGTTGGAGTAAACCAGAAAAATTTAGGTAGAGCCAGATCTAAATGTTGGTTAGGTAAGCATCCTGTAGTAAGAGGAGTAGTTATGAACCCCGTAGACCATCCGCATGAGGGTGGTGAAGGGAGGGCCCCAATTGGTAGGAAAAAAACCCGCAACTCCTTGGGATTTTCCAGCACTTGGAAGAAGATAATTTGA
Predicted protein sequences of Glyma.19g051900
>Glyma.19g051900.1.p sequence-type=predicted peptide transcript=Glyma.19g051900.1 locus=Glyma.19g051900 ID=Glyma.19g051900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLCKKLVQFGKRFLATVGGAIAKLITKEGKSATLKLPSGEVRLGNVGVNQKNLGRARSKCWLGKHPVVRGVVMNPVDHPHEGGEGRAPIGRKKTRNSLGFSSTWKKII*






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