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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G67180.1 | AT | zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein | JGI | N/A | IEA |
GO:0005515 | GO-mf | protein binding | JGI | N/A | IEA |
GO:0008270 | GO-mf | zinc ion binding | JGI | N/A | IEA |
GO:0046872 | GO-mf | metal ion binding | EnsemblGenomes | N/A | IEA |
GO:0046872 | GO-mf | metal ion binding | JGI | N/A | IEA |
PTHR13561 | Panther | DNA REPLICATION REGULATOR DPB11-RELATED | JGI | N/A | IEA |
PTHR13561:SF17 | Panther | JGI | N/A | IEA | |
PF00097 | PFAM | Zinc finger, C3HC4 type (RING finger) | JGI | N/A | IEA |
PF00533 | PFAM | BRCA1 C Terminus (BRCT) domain | JGI | N/A | IEA |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma19g05660 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.19g042100.2 sequence-type=transcript locus=Glyma.19g042100 ID=Glyma.19g042100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 TTCAATTCAATTTTCATTTACCGCCAAACGCTCTCTCTCACTCAGCACTGTGAAAGTGCCATGGAAGCAGAAGAACAATTTGAACTTCCTCATCAATCTCACGATTCTCCGGTTCAAGGCATGGAACGAGTGGTGGCTACGGTGAGCGGCTACCATGGCTCCGAGCGATTCAATCTCATCAAGCTGATTTCACAGGCTGGCGGCAATTACGTTGGTGCTATGTCGAAATCTATAACTCATCTGGTGTGTTGGAAATTTGAAGGAAAGAAATATGATATTGCGCTGAAGTTTAGAATACATGTAGTTAACCACCGATGGGTTGAGGACTGCATAAAGGAAGGAAGGCGTGTTCCAGAAGATTCTTATACCTTGCAAAGTGGACATGAAGTAGGGCCATTGCTACTGGAAGTTCCCCTTGTTCGAGCCAGTAGCCTGACAAAGAAAAAATTGGTCGGTGACAAGTTACATGCTACTGGGTCTGAAAGGAAAAATTCCGACTTCAGTTCTGGAGCCTCTGGAACTTATGTTTTGGAAGATTCTTGTTTAATGAAAAAGCATGAGGAGTCAAGTTCATATTCATCTAGACTGTCAAGGAGGGGAAAAAGGCATATTTGCAATGGTAAGGAAAACACTACTGTGGCTAGACCTTCTCGTAAAGGAAGAAGACTTGCGAGTGATCTTGTTGACAAAGTAGTGTTGGGTCCTTCGATTTTGGATTTAACCACAGATGACCACCTTTTTAGAATGGATAGCCAACAAACTGATGCCGAAGCTACCTCTAGCCTTTCTGTTGGTGTCAATAATAACATTATTCTACAAAATAGTGAAGGACCTAACGCAGGATTAAGTAATCAAAGTAGAACTATCATTGGTGGTTCAAATGATATTGAACAGATCAAAGATTCAAGTCATATATCTAAACCTAGAAATTCAACTTCATTTATTGAAGATCCCCTACCTGTGCCACAAACATCAATTGATTTATGTTCCAGTGATGATGAAAAGTTCACAGATGGTGATCAGGCTGATAATGTTGCTGGTTTACCTACTTCAACAGAGATGTCATGTGTAATATGTCTCACAGAATTCAGCTCAACACGGGGGATTCTGCCATGTGGACATCGATTTTGTTTTCCATGCATCCAGAATTGGGCTGATCATACGACTTCAATGAGAAAAACATCAACATGCCCTTTGTGCAAGGCAAGTTTTATGATGATTAAGAAAGTTGAGCATGCAGCCACCGCTGATCAAAAAATATACTCCCAGACAATCCCATGTGACAATTCAGCCTCAGTTATTTTTATCCCCGTGGATCAAAATTTACCAGATAATATCTTTGAGTCTGCACAGTCAAATGCTTGTGTAGTTTGCCGTGGTCGGGAACCAGAGGATCTCCTTGAGAGTTGCGATGTTTGCCACATTCGAAAGATCCATTCCTATTGCATGGACCCTCCTCTACGGCCATGGATATGCACTCACTGCAAGGAACTTCGGATGCATTATCGTAGTAATCACTTGTATTAGTGTACATCTCTTATCCAATGCAACTCTTTGGAGTCCCTAGTATGTCCCCATTCATTGTGATTTTGGGGAGCTTCTCATGCTGCGCAAATCTTAAAGCGAAACTGTAGTCAGTTGCATTCTTAATTCTCATCAATAAAACTAAGAAAATGTTGAGGTTTTGATTGGGAAACAAAGCCTTGCTAAGTTAACATGTGGCATTATCTTGGACAATTTTATTATAAGTATGGCGTAATGGTAAAACtgtgcctttgtgattagttgattgtggatttaaacttggaaatagcctctttgcatatgaagggtaTA >Glyma.19g042100.3 sequence-type=transcript locus=Glyma.19g042100 ID=Glyma.19g042100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 TTCAATTCAATTTTCATTTACCGCCAAACGCTCTCTCTCACTCAGCACTGTGAAAGTGCCATGGAAGCAGAAGAACAATTTGAACTTCCTCATCAATCTCACGGTCTCTCTTCTCTCTCTTAGGGTTTCAATTCGATTCGGAATGTTTAGCTCATCAAGAAAATTCTCCGGTTCAAGGCATGGAACGAGTGGTGGCTACGGTGAGCGGCTACCATGGCTCCGAGCGATTCAATCTCATCAAGCTGATTTCACAGGCTGGCGGCAATTACGTTGGTGCTATGTCGAAATCTATAACTCATCTGGTGTGTTGGAAATTTGAAGGAAAGAAATATGATATTGCGCTGAAGTTTAGAATACATGTAGTTAACCACCGATGGGTTGAGGACTGCATAAAGGAAGGAAGGCGTGTTCCAGAAGATTCTTATACCTTGCAAAGTGGACATGAAGTAGGGCCATTGCTACTGGAAGTTCCCCTTGTTCGAGCCAGTAGCCTGACAAAGAAAAAATTGGTCGGTGACAAGTTACATGCTACTGGGTCTGAAAGGAAAAATTCCGACTTCAGTTCTGGAGCCTCTGGAACTTATGTTTTGGAAGATTCTTGTTTAATGAAAAAGCATGAGGAGTCAAGTTCATATTCATCTAGACTGTCAAGGAGGGGAAAAAGGCATATTTGCAATGGTAAGGAAAACACTACTGTGGCTAGACCTTCTCGTAAAGGAAGAAGACTTGCGAGTGATCTTGTTGACAAAGTAGTGTTGGGTCCTTCGATTTTGGATTTAACCACAGATGACCACCTTTTTAGAATGGATAGCCAACAAACTGATGCCGAAGCTACCTCTAGCCTTTCTGTTGGTGTCAATAATAACATTATTCTACAAAATAGTGAAGGACCTAACGCAGGATTAAGTAATCAAAGTAGAACTATCATTGGTGGTTCAAATGATATTGAACAGATCAAAGATTCAAGTCATATATCTAAACCTAGAAATTCAACTTCATTTATTGAAGATCCCCTACCTGTGCCACAAACATCAATTGATTTATGTTCCAGTGATGATGAAAAGTTCACAGATGGTGATCAGGCTGATAATGTTGCTGGTTTACCTACTTCAACAGAGATGTCATGTGTAATATGTCTCACAGAATTCAGCTCAACACGGGGGATTCTGCCATGTGGACATCGATTTTGTTTTCCATGCATCCAGAATTGGGCTGATCATACGACTTCAATGAGAAAAACATCAACATGCCCTTTGTGCAAGGCAAGTTTTATGATGATTAAGAAAGTTGAGCATGCAGCCACCGCTGATCAAAAAATATACTCCCAGACAATCCCATGTGACAATTCAGCCTCAGTTATTTTTATCCCCGTGGATCAAAATTTACCAGATAATATCTTTGAGTCTGCACAGTCAAATGCTTGTGTAGTTTGCCGTGGTCGGGAACCAGAGGATCTCCTTGAGAGTTGCGATGTTTGCCACATTCGAAAGATCCATTCCTATTGCATGGACCCTCCTCTACGGCCATGGATATGCACTCACTGCAAGGAACTTCGGATGCATTATCGTAGTAATCACTTGTATTAGTGTACATCTCTTATCCAATGCAACTCTTTGGAGTCCCTAGTATGTCCCCATTCATTGTGATTTTGGGGAGCTTCTCATGCTGCGCAAATCTTAAAGCGAAACTGTAGTCAGTTGCATTCTTAATTCTCATCAATAAAACTAAGAAAATGTTGAGGTTTTGATTGGGAAACAAAGCCTTGCTAAGTTAACATGTGGCATTATCTTGGACAATTTTATTATAAGTATGGCGTAATGGTAAAACtgtgcctttgtgattagttgattgtggatttaaacttggaaatagcctctttgcatatga
>Glyma.19g042100.1 sequence-type=CDS polypeptide=Glyma.19g042100.1.p locus=Glyma.19g042100 ID=Glyma.19g042100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAAGCAGAAGAACAATTTGAACTTCCTCATCAATCTCACGTTGCAGATTCTCCGGTTCAAGGCATGGAACGAGTGGTGGCTACGGTGAGCGGCTACCATGGCTCCGAGCGATTCAATCTCATCAAGCTGATTTCACAGGCTGGCGGCAATTACGTTGGTGCTATGTCGAAATCTATAACTCATCTGGTGTGTTGGAAATTTGAAGGAAAGAAATATGATATTGCGCTGAAGTTTAGAATACATGTAGTTAACCACCGATGGGTTGAGGACTGCATAAAGGAAGGAAGGCGTGTTCCAGAAGATTCTTATACCTTGCAAAGTGGACATGAAGTAGGGCCATTGCTACTGGAAGTTCCCCTTGTTCGAGCCAGTAGCCTGACAAAGAAAAAATTGGTCGGTGACAAGTTACATGCTACTGGGTCTGAAAGGAAAAATTCCGACTTCAGTTCTGGAGCCTCTGGAACTTATGTTTTGGAAGATTCTTGTTTAATGAAAAAGCATGAGGAGTCAAGTTCATATTCATCTAGACTGTCAAGGAGGGGAAAAAGGCATATTTGCAATGGTAAGGAAAACACTACTGTGGCTAGACCTTCTCGTAAAGGAAGAAGACTTGCGAGTGATCTTGTTGACAAAGTAGTGTTGGGTCCTTCGATTTTGGATTTAACCACAGATGACCACCTTTTTAGAATGGATAGCCAACAAACTGATGCCGAAGCTACCTCTAGCCTTTCTGTTGGTGTCAATAATAACATTATTCTACAAAATAGTGAAGGACCTAACGCAGGATTAAGTAATCAAAGTAGAACTATCATTGGTGGTTCAAATGATATTGAACAGATCAAAGATTCAAGTCATATATCTAAACCTAGAAATTCAACTTCATTTATTGAAGATCCCCTACCTGTGCCACAAACATCAATTGATTTATGTTCCAGTGATGATGAAAAGTTCACAGATGGTGATCAGGCTGATAATGTTGCTGGTTTACCTACTTCAACAGAGATGTCATGTGTAATATGTCTCACAGAATTCAGCTCAACACGGGGGATTCTGCCATGTGGACATCGATTTTGTTTTCCATGCATCCAGAATTGGGCTGATCATACGACTTCAATGAGAAAAACATCAACATGCCCTTTGTGCAAGGCAAGTTTTATGATGATTAAGAAAGTTGAGCATGCAGCCACCGCTGATCAAAAAATATACTCCCAGACAATCCCATGTGACAATTCAGCCTCAGTTATTTTTATCCCCGTGGATCAAAATTTACCAGATAATATCTTTGAGTCTGCACAGTCAAATGCTTGTGTAGTTTGCCGTGGTCGGGAACCAGAGGATCTCCTTGAGAGTTGCGATGTTTGCCACATTCGAAAGATCCATTCCTATTGCATGGACCCTCCTCTACGGCCATGGATATGCACTCACTGCAAGGAACTTCGGATGCATTATCGTAGTAATCACTTGTATTAG >Glyma.19g042100.2 sequence-type=CDS polypeptide=Glyma.19g042100.2.p locus=Glyma.19g042100 ID=Glyma.19g042100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAAGCAGAAGAACAATTTGAACTTCCTCATCAATCTCACGATTCTCCGGTTCAAGGCATGGAACGAGTGGTGGCTACGGTGAGCGGCTACCATGGCTCCGAGCGATTCAATCTCATCAAGCTGATTTCACAGGCTGGCGGCAATTACGTTGGTGCTATGTCGAAATCTATAACTCATCTGGTGTGTTGGAAATTTGAAGGAAAGAAATATGATATTGCGCTGAAGTTTAGAATACATGTAGTTAACCACCGATGGGTTGAGGACTGCATAAAGGAAGGAAGGCGTGTTCCAGAAGATTCTTATACCTTGCAAAGTGGACATGAAGTAGGGCCATTGCTACTGGAAGTTCCCCTTGTTCGAGCCAGTAGCCTGACAAAGAAAAAATTGGTCGGTGACAAGTTACATGCTACTGGGTCTGAAAGGAAAAATTCCGACTTCAGTTCTGGAGCCTCTGGAACTTATGTTTTGGAAGATTCTTGTTTAATGAAAAAGCATGAGGAGTCAAGTTCATATTCATCTAGACTGTCAAGGAGGGGAAAAAGGCATATTTGCAATGGTAAGGAAAACACTACTGTGGCTAGACCTTCTCGTAAAGGAAGAAGACTTGCGAGTGATCTTGTTGACAAAGTAGTGTTGGGTCCTTCGATTTTGGATTTAACCACAGATGACCACCTTTTTAGAATGGATAGCCAACAAACTGATGCCGAAGCTACCTCTAGCCTTTCTGTTGGTGTCAATAATAACATTATTCTACAAAATAGTGAAGGACCTAACGCAGGATTAAGTAATCAAAGTAGAACTATCATTGGTGGTTCAAATGATATTGAACAGATCAAAGATTCAAGTCATATATCTAAACCTAGAAATTCAACTTCATTTATTGAAGATCCCCTACCTGTGCCACAAACATCAATTGATTTATGTTCCAGTGATGATGAAAAGTTCACAGATGGTGATCAGGCTGATAATGTTGCTGGTTTACCTACTTCAACAGAGATGTCATGTGTAATATGTCTCACAGAATTCAGCTCAACACGGGGGATTCTGCCATGTGGACATCGATTTTGTTTTCCATGCATCCAGAATTGGGCTGATCATACGACTTCAATGAGAAAAACATCAACATGCCCTTTGTGCAAGGCAAGTTTTATGATGATTAAGAAAGTTGAGCATGCAGCCACCGCTGATCAAAAAATATACTCCCAGACAATCCCATGTGACAATTCAGCCTCAGTTATTTTTATCCCCGTGGATCAAAATTTACCAGATAATATCTTTGAGTCTGCACAGTCAAATGCTTGTGTAGTTTGCCGTGGTCGGGAACCAGAGGATCTCCTTGAGAGTTGCGATGTTTGCCACATTCGAAAGATCCATTCCTATTGCATGGACCCTCCTCTACGGCCATGGATATGCACTCACTGCAAGGAACTTCGGATGCATTATCGTAGTAATCACTTGTATTAG >Glyma.19g042100.3 sequence-type=CDS polypeptide=Glyma.19g042100.3.p locus=Glyma.19g042100 ID=Glyma.19g042100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGAACGAGTGGTGGCTACGGTGAGCGGCTACCATGGCTCCGAGCGATTCAATCTCATCAAGCTGATTTCACAGGCTGGCGGCAATTACGTTGGTGCTATGTCGAAATCTATAACTCATCTGGTGTGTTGGAAATTTGAAGGAAAGAAATATGATATTGCGCTGAAGTTTAGAATACATGTAGTTAACCACCGATGGGTTGAGGACTGCATAAAGGAAGGAAGGCGTGTTCCAGAAGATTCTTATACCTTGCAAAGTGGACATGAAGTAGGGCCATTGCTACTGGAAGTTCCCCTTGTTCGAGCCAGTAGCCTGACAAAGAAAAAATTGGTCGGTGACAAGTTACATGCTACTGGGTCTGAAAGGAAAAATTCCGACTTCAGTTCTGGAGCCTCTGGAACTTATGTTTTGGAAGATTCTTGTTTAATGAAAAAGCATGAGGAGTCAAGTTCATATTCATCTAGACTGTCAAGGAGGGGAAAAAGGCATATTTGCAATGGTAAGGAAAACACTACTGTGGCTAGACCTTCTCGTAAAGGAAGAAGACTTGCGAGTGATCTTGTTGACAAAGTAGTGTTGGGTCCTTCGATTTTGGATTTAACCACAGATGACCACCTTTTTAGAATGGATAGCCAACAAACTGATGCCGAAGCTACCTCTAGCCTTTCTGTTGGTGTCAATAATAACATTATTCTACAAAATAGTGAAGGACCTAACGCAGGATTAAGTAATCAAAGTAGAACTATCATTGGTGGTTCAAATGATATTGAACAGATCAAAGATTCAAGTCATATATCTAAACCTAGAAATTCAACTTCATTTATTGAAGATCCCCTACCTGTGCCACAAACATCAATTGATTTATGTTCCAGTGATGATGAAAAGTTCACAGATGGTGATCAGGCTGATAATGTTGCTGGTTTACCTACTTCAACAGAGATGTCATGTGTAATATGTCTCACAGAATTCAGCTCAACACGGGGGATTCTGCCATGTGGACATCGATTTTGTTTTCCATGCATCCAGAATTGGGCTGATCATACGACTTCAATGAGAAAAACATCAACATGCCCTTTGTGCAAGGCAAGTTTTATGATGATTAAGAAAGTTGAGCATGCAGCCACCGCTGATCAAAAAATATACTCCCAGACAATCCCATGTGACAATTCAGCCTCAGTTATTTTTATCCCCGTGGATCAAAATTTACCAGATAATATCTTTGAGTCTGCACAGTCAAATGCTTGTGTAGTTTGCCGTGGTCGGGAACCAGAGGATCTCCTTGAGAGTTGCGATGTTTGCCACATTCGAAAGATCCATTCCTATTGCATGGACCCTCCTCTACGGCCATGGATATGCACTCACTGCAAGGAACTTCGGATGCATTATCGTAGTAATCACTTGTATTAG
>Glyma.19g042100.1.p sequence-type=predicted peptide transcript=Glyma.19g042100.1 locus=Glyma.19g042100 ID=Glyma.19g042100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEAEEQFELPHQSHVADSPVQGMERVVATVSGYHGSERFNLIKLISQAGGNYVGAMSKSITHLVCWKFEGKKYDIALKFRIHVVNHRWVEDCIKEGRRVPEDSYTLQSGHEVGPLLLEVPLVRASSLTKKKLVGDKLHATGSERKNSDFSSGASGTYVLEDSCLMKKHEESSSYSSRLSRRGKRHICNGKENTTVARPSRKGRRLASDLVDKVVLGPSILDLTTDDHLFRMDSQQTDAEATSSLSVGVNNNIILQNSEGPNAGLSNQSRTIIGGSNDIEQIKDSSHISKPRNSTSFIEDPLPVPQTSIDLCSSDDEKFTDGDQADNVAGLPTSTEMSCVICLTEFSSTRGILPCGHRFCFPCIQNWADHTTSMRKTSTCPLCKASFMMIKKVEHAATADQKIYSQTIPCDNSASVIFIPVDQNLPDNIFESAQSNACVVCRGREPEDLLESCDVCHIRKIHSYCMDPPLRPWICTHCKELRMHYRSNHLY* >Glyma.19g042100.2.p sequence-type=predicted peptide transcript=Glyma.19g042100.2 locus=Glyma.19g042100 ID=Glyma.19g042100.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MEAEEQFELPHQSHDSPVQGMERVVATVSGYHGSERFNLIKLISQAGGNYVGAMSKSITHLVCWKFEGKKYDIALKFRIHVVNHRWVEDCIKEGRRVPEDSYTLQSGHEVGPLLLEVPLVRASSLTKKKLVGDKLHATGSERKNSDFSSGASGTYVLEDSCLMKKHEESSSYSSRLSRRGKRHICNGKENTTVARPSRKGRRLASDLVDKVVLGPSILDLTTDDHLFRMDSQQTDAEATSSLSVGVNNNIILQNSEGPNAGLSNQSRTIIGGSNDIEQIKDSSHISKPRNSTSFIEDPLPVPQTSIDLCSSDDEKFTDGDQADNVAGLPTSTEMSCVICLTEFSSTRGILPCGHRFCFPCIQNWADHTTSMRKTSTCPLCKASFMMIKKVEHAATADQKIYSQTIPCDNSASVIFIPVDQNLPDNIFESAQSNACVVCRGREPEDLLESCDVCHIRKIHSYCMDPPLRPWICTHCKELRMHYRSNHLY* >Glyma.19g042100.3.p sequence-type=predicted peptide transcript=Glyma.19g042100.3 locus=Glyma.19g042100 ID=Glyma.19g042100.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MERVVATVSGYHGSERFNLIKLISQAGGNYVGAMSKSITHLVCWKFEGKKYDIALKFRIHVVNHRWVEDCIKEGRRVPEDSYTLQSGHEVGPLLLEVPLVRASSLTKKKLVGDKLHATGSERKNSDFSSGASGTYVLEDSCLMKKHEESSSYSSRLSRRGKRHICNGKENTTVARPSRKGRRLASDLVDKVVLGPSILDLTTDDHLFRMDSQQTDAEATSSLSVGVNNNIILQNSEGPNAGLSNQSRTIIGGSNDIEQIKDSSHISKPRNSTSFIEDPLPVPQTSIDLCSSDDEKFTDGDQADNVAGLPTSTEMSCVICLTEFSSTRGILPCGHRFCFPCIQNWADHTTSMRKTSTCPLCKASFMMIKKVEHAATADQKIYSQTIPCDNSASVIFIPVDQNLPDNIFESAQSNACVVCRGREPEDLLESCDVCHIRKIHSYCMDPPLRPWICTHCKELRMHYRSNHLY*
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