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Report for Sequence Feature Glyma.19g036900

Feature Type:gene_model
Chromosome:Gm19
Start:5130042
stop:5135305
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g036900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G30820.1AT cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related JGI N/AIEA
GO:0000079GO-bp regulation of cyclin-dependent protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0006281GO-bp DNA repair EnsemblGenomesN/AIEA
GO:0006289GO-bp nucleotide-excision repair EnsemblGenomesN/AIEA
GO:0006357GO-bp regulation of transcription by RNA polymerase II EnsemblGenomesN/AIEA
GO:0007049GO-bp cell cycle JGI N/AIEA
GO:0045737GO-bp positive regulation of cyclin-dependent protein serine/threonine kinase activity EnsemblGenomesN/AIEA
GO:0005634GO-cc nucleus JGI N/AIEA
GO:0005675GO-cc holo TFIIH complex EnsemblGenomesN/AIEA
GO:0061575GO-mf cyclin-dependent protein serine/threonine kinase activator activity EnsemblGenomesN/AIEA
PTHR12683Panther FAMILY NOT NAMED JGI N/AIEA
PTHR12683:SF3Panther JGI N/AIEA
PF06391PFAM CDK-activating kinase assembly factor MAT1 JGI N/AIEA

Expression Patterns of Glyma.19g036900
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g036900 not represented in the dataset
Glyma.19g036900 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g036900 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g04910 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.19g036900
>Glyma.19g036900.2 sequence-type=transcript locus=Glyma.19g036900 ID=Glyma.19g036900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTGACTCTCTGTGACGCATCTGCAGCGTCTTCCTCCGTGGCGTGGCTTGTTAAGGTGTGAAAAGTGAAAGAGGGAACAAGAAGTTGACGGTAGCAGAATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGAGACAATAATAATCATGCAAGGCTGGACATGCTTATTTTAAAATGGTGTTTAGATACTTTCTAAATCCTAAGGGCATGCAAATTCCAGTGTCACAGAAGCTATTTTGGCATGGATATTGCGATGTAAATGGTGTAGAATGTAGATTTGTTGAATTTTGTTCTGTGAACCATATTGAATTTTATTGTAAGGGGCTTTGGCTTTTCTTTTTAAACTATTCTCTTTCTCCCTTTTCTTTGAAGATGTTATTTGTTTATAGAAAGACTTTAATTTG

>Glyma.19g036900.3 sequence-type=transcript locus=Glyma.19g036900 ID=Glyma.19g036900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ttcaatggtgctctttctttctttcaccttttctctctGAACAACAATACTCTTCGCGACAACAAAAACCAAGAACGAAGTGCACTATTATTACGTGTTTTCAATCTCTCACCCATTTCCTTCTTCAGAGTCTCTCTCTGTTTCCAACTTGGTAGCGCTGTGTGAAAAGTGAAAGAGGGAACAAGAAGTTGACGGTAGCAGAATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGAGACAATAATAATCATGCAAGGCTGGACATGCTTATTTTAAAATGGTGTTTAGATACTTTCTAAATCCTAAGGGCATGCAAATTCCAGTGTCACAGAAGCTATTTTGGCATGGATATTGCGATGTAAATGGTGTAGAATGTAGATTTGTTGAATTTTGTTCTGTGAACCATATTGAATTTTATTGTAAGGGGCTTTGGCTTTTCTTTTTAAACTATTCTCTTTCTCCCTTTTCTTTGAAGATGTTATTTGTTTATAGAAAGACTTTAATTTG

>Glyma.19g036900.4 sequence-type=transcript locus=Glyma.19g036900 ID=Glyma.19g036900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ttctttctttcaccttttctctctGAACAACAATACTCTTCGCGACAACAAAAACCAAGAACGAAGTGCACTATTATTACGTGTTTTCAATCTCTCACCCATTTCCTTCTTCAGAGTCTCTCTCTGTTTCCAACTTGGTGTGAAAAGTGAAAGAGGGAACAAGAAGTTGACGGTAGCAGAATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGAGACAATAATAATCATGCAAGGCTGGACATGCTTATTTTAAAATGGTGTTTAGATACTTTCTAAATCCTAAGGGCATGCAAATTCCAGTGTCACAGAAGCTATTTTGGCATGGATATTGCGATGTAAATGGTGTAGAATGTAGATTTGTTGAATTTTGTTCTGTGAACCATATTGAATTTTATTGTAAGGGGCTTTGGCTTTTCTTTTTAAACTATTCTCTTTCTCCCTTTTCTTTGAAGATGTTATTTGTTTATAGAAAGACTTTAATTTG
Coding sequences of Glyma.19g036900
>Glyma.19g036900.1 sequence-type=CDS polypeptide=Glyma.19g036900.1.p locus=Glyma.19g036900 ID=Glyma.19g036900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGA

>Glyma.19g036900.2 sequence-type=CDS polypeptide=Glyma.19g036900.2.p locus=Glyma.19g036900 ID=Glyma.19g036900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGA

>Glyma.19g036900.3 sequence-type=CDS polypeptide=Glyma.19g036900.3.p locus=Glyma.19g036900 ID=Glyma.19g036900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGA

>Glyma.19g036900.4 sequence-type=CDS polypeptide=Glyma.19g036900.4.p locus=Glyma.19g036900 ID=Glyma.19g036900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGTGGTCTCCAGTACAAATCCCCACAATAAGGAGATAGCTATCAGGAGGAGGATTGCTAGCATATTTAATAAACGTGAAGATGATTTCCCATCTTTGAGAGAATACAATGATTACTTGGAGGAAGTAGAGGACATGACATTTAACTTGATTGAAGGAATAGATGTTTCAGATATTGAAGCAAAAATTGCCAAATACCAGGAAGAAAATGCAGAACAAATAATGATTAATCGAGCTCGGAAGGCTGAAGAATTAGCTGCAGCTATGGCAGCAAGTAAGGGACAACCTGCACAAACTGATGATGATTCAGCCACAAACCAAAACTCCCAAGCAGGATTTGGAGCTGTTCCTCAAGGACAATATGCACCTACATTTGCAGGAGGACAGCCAAGGCCTACAGGCATGGCCCCACAGCCTTTACCACTCGGAGGGGGCGACATGCCGGGCTTTGCAGGTGATGATGAGGAAACCAAGAGGCTACGAACTGAGAGGGCTGGAGGATGGAGTGGAGATATTAGTAGGAAAAGGGCACTTGAAGAAGCCTTTGGAAGCATCTGGGTTTGCTGA
Predicted protein sequences of Glyma.19g036900
>Glyma.19g036900.1.p sequence-type=predicted peptide transcript=Glyma.19g036900.1 locus=Glyma.19g036900 ID=Glyma.19g036900.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVSSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVSDIEAKIAKYQEENAEQIMINRARKAEELAAAMAASKGQPAQTDDDSATNQNSQAGFGAVPQGQYAPTFAGGQPRPTGMAPQPLPLGGGDMPGFAGDDEETKRLRTERAGGWSGDISRKRALEEAFGSIWVC*

>Glyma.19g036900.2.p sequence-type=predicted peptide transcript=Glyma.19g036900.2 locus=Glyma.19g036900 ID=Glyma.19g036900.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVSSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVSDIEAKIAKYQEENAEQIMINRARKAEELAAAMAASKGQPAQTDDDSATNQNSQAGFGAVPQGQYAPTFAGGQPRPTGMAPQPLPLGGGDMPGFAGDDEETKRLRTERAGGWSGDISRKRALEEAFGSIWVC*

>Glyma.19g036900.3.p sequence-type=predicted peptide transcript=Glyma.19g036900.3 locus=Glyma.19g036900 ID=Glyma.19g036900.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVSSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVSDIEAKIAKYQEENAEQIMINRARKAEELAAAMAASKGQPAQTDDDSATNQNSQAGFGAVPQGQYAPTFAGGQPRPTGMAPQPLPLGGGDMPGFAGDDEETKRLRTERAGGWSGDISRKRALEEAFGSIWVC*

>Glyma.19g036900.4.p sequence-type=predicted peptide transcript=Glyma.19g036900.4 locus=Glyma.19g036900 ID=Glyma.19g036900.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MVVSSTNPHNKEIAIRRRIASIFNKREDDFPSLREYNDYLEEVEDMTFNLIEGIDVSDIEAKIAKYQEENAEQIMINRARKAEELAAAMAASKGQPAQTDDDSATNQNSQAGFGAVPQGQYAPTFAGGQPRPTGMAPQPLPLGGGDMPGFAGDDEETKRLRTERAGGWSGDISRKRALEEAFGSIWVC*






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