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Report for Sequence Feature Glyma.19g036300

Feature Type:gene_model
Chromosome:Gm19
Start:5013320
stop:5016790
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g036300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G50840.1AT polymerase gamma 2 JGI N/AIEA
GO:0006139GO-bp nucleobase-containing compound metabolic process EnsemblGenomesN/AIEA
GO:0006139GO-bp nucleobase-containing compound metabolic process JGI N/AIEA
GO:0006260GO-bp DNA replication EnsemblGenomesN/AIEA
GO:0006260GO-bp DNA replication JGI N/AIEA
GO:0006261GO-bp DNA-dependent DNA replication EnsemblGenomesN/AIEA
GO:0071897GO-bp DNA biosynthetic process EnsemblGenomesN/AIEA
GO:0090305GO-bp nucleic acid phosphodiester bond hydrolysis EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding EnsemblGenomesN/AIEA
GO:0003676GO-mf nucleic acid binding JGI N/AIEA
GO:0003677GO-mf DNA binding EnsemblGenomesN/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003887GO-mf DNA-directed DNA polymerase activity EnsemblGenomesN/AIEA
GO:0003887GO-mf DNA-directed DNA polymerase activity JGI N/AIEA
GO:0008408GO-mf 3'-5' exonuclease activity EnsemblGenomesN/AIEA
GO:0008408GO-mf 3'-5' exonuclease activity JGI N/AIEA
PTHR10133Panther DNA POLYMERASE I JGI N/AIEA
PF00476PFAM DNA polymerase family A JGI N/AIEA
PF01612PFAM 3'-5' exonuclease JGI N/AIEA

Expression Patterns of Glyma.19g036300
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g036300 not represented in the dataset
Glyma.19g036300 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g036300 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g04810 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g036300
>Glyma.19g036300.1 sequence-type=CDS polypeptide=Glyma.19g036300.1.p locus=Glyma.19g036300 ID=Glyma.19g036300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTCTGGCATAATTATAGCTTTGACTGTCATGTTATAGAGAATTATGGATTCAAAGTTTCGGGATTTCATGCTGATACAATGCACATGGCACGATTATGGGATTCTTCAAGACATTTGGATGGGGGTTATTCTCTTGAAGGACTTACAGGTGACAGAAGGGTCATGTCTAGGGCTCAGCTGAACCATGAAAAGGACTTGATTGGTAAGGTGTCAATGAAAACTATATTTAGTAAGAAAAAATTGAAAAAGGATGGATCTGAGGGTAAAACAAGTATCATTGCTCCTGTTGAAGAACTACAGAGAGATGAGCGTATACCTTGGATATGTTATTCTGCCTTAGATGCTAGCAGCACTTTGAAGCTGTATGAGAGCCTAAAGAGCCATCTTTCAGACATGCCCTGGAAATTTGATGGTGTGCCAGTTTATGGGAAAACCATGTATGATTTCTACAATGAATATTGGCGTCCATTTGGTGAGCTTCTAGTCATGATGGAATCTGAGGGAATGCTAGTTGACCGGGCTTATCTTGAAAGCATAGAAAAGGTGGCCAAAGAAGAGCAAGAGGTAGCTGTTAATAGATTCCGTAAATGGGCCACTAGGTATTGTCCTGATGCCCAGTATATGAATGTGGGAAGTGATTCGCAGTTGCGCCAGCTGCTTTTTGGTGGCATTGTGAACAGAAAGGACTCCAATCAAACGCTTCCAACTGAACGAATATTCAAAATTCCCAATGTTAATAATGTGATTGAAGAAGGCAAGAAGGCTCCAAAAAGATTTTGTGATATAAAGTTGACGAGCTTAGGTTATAATCTGGAGACTGAGATGTACACAGCAACTGGTTGGCCGTCAGTTAGTGGTCATGCTTTAAAGGCCCTGGCTGGAAGTATTTCCGCTGATTATGACTTTTTTGATGAGGATTGTAACTTGGATCTCGATGATGAAGATGAAAATCCTTCTCAAAGTGAAGTTGCACCGGTAAAAATTGATAAATCTGCATATGGGACAGCCTATGCAGCTTTTCCAACAGAGGAAGAAGGGAGAGAAGCTTGCCATGCAATTGCTGCTTTATGTCAAGTCTGTTCAATCAACTCTTTGATCTCCAACTTCATCCTTCCCCTGCAGGGACATAATATATCAGGAAAAGATCTCCGTGTTCATTGTTCCTTAAATATCAACACAGAGACAGGACGCTTGTCAGCAAGAAGGCCAAATCTGCAGAATCAACCTGCTCTAGAAAAGGATCGATACAAAATCCGTCAAGCATTCATTGCTGCACCCAAGAATTCTCTTATAGTTGCTGATTATGGACAGCTGGAACTTAGGATTCTGGCACACCTTGCAGACTGTAAGAGCATGTTGGAAGCTTTTGAAGCTGGTGGAGATTTCCATTCAAGGACTGCAATGAATATGTACCCACATATTCGTGAAGCACTTGAAAAAAAGGAAGTGCTTCTTGAGTGGCATCCTCAGCCTGGTGAAGATAAACCCCCAGTTCCTCTTTTGAAGGTAACTGTATGCTGA
Predicted protein sequences of Glyma.19g036300
>Glyma.19g036300.1.p sequence-type=predicted peptide transcript=Glyma.19g036300.1 locus=Glyma.19g036300 ID=Glyma.19g036300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
VWHNYSFDCHVIENYGFKVSGFHADTMHMARLWDSSRHLDGGYSLEGLTGDRRVMSRAQLNHEKDLIGKVSMKTIFSKKKLKKDGSEGKTSIIAPVEELQRDERIPWICYSALDASSTLKLYESLKSHLSDMPWKFDGVPVYGKTMYDFYNEYWRPFGELLVMMESEGMLVDRAYLESIEKVAKEEQEVAVNRFRKWATRYCPDAQYMNVGSDSQLRQLLFGGIVNRKDSNQTLPTERIFKIPNVNNVIEEGKKAPKRFCDIKLTSLGYNLETEMYTATGWPSVSGHALKALAGSISADYDFFDEDCNLDLDDEDENPSQSEVAPVKIDKSAYGTAYAAFPTEEEGREACHAIAALCQVCSINSLISNFILPLQGHNISGKDLRVHCSLNINTETGRLSARRPNLQNQPALEKDRYKIRQAFIAAPKNSLIVADYGQLELRILAHLADCKSMLEAFEAGGDFHSRTAMNMYPHIREALEKKEVLLEWHPQPGEDKPPVPLLKVTVC*






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