Report for Sequence Feature Glyma.19g032600
Feature Type: gene_model
Chromosome: Gm19
Start: 4166595
stop: 4169238
Source: JGI
Version: Wm82.a2.v1
High confidence: yes
A previous version of this gene model can be found here:
Annotations for Glyma.19g032600
Expression Patterns of Glyma.19g032600
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
To see more experiments click HERE
Related Legume Genes
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS .
Gene information in GlycineMine developed by LIS .
Related Plant Genes
Gene families from PhyloGenes .
Paralogs of Glyma.19g032600
Paralog Evidence Comments
Glyma.13g054600 IGC Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.
Gene model name correspondences to Glyma.19g032600 Gene Call Version Wm82.a2.v1
Corresponding Name Annotation Version Evidence Comments
Glyma19g04020 Wm82.a1.v1.1 IGC As supplied by JGI
Transcripts of Glyma.19g032600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.19g032600.2 sequence-type=transcript locus=Glyma.19g032600 ID=Glyma.19g032600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTACAGGAAAAAAGTTTAAGGAGAAACCTTCAAACTAACACTAGCATCATTGTCCAAATGAAGTGTGCATTATATGACTATGATCCACTATGAAAAATGTCACCCAATATTTCCATATAAAGACTTGCTTAACCCCTCCACTTTTTCCCTTCCACACTCCCTTATTTATATGCGATTTCAACCAAAGCCCTTTTTCATAACTGCTTCTCCCTAGCCCCAATTGCTTCAAAAAAATCTCACCAAGGGAAATTAGCCACAATGGCAACAATATCTCCAATGTGGTTCATACTTCTTGGAATAACTTGTTTCTGTGTGACTGATTCTTATGGGGCGAACATGCCTCTAAGGACTCTTTATGGTGGCACTCATCAAGAAGCATTGCTTGGACTTGAGGCATTCAAGGCCTCTATAACTAGGCGTGACTCCATTGCTTCAACACCACCTTCATTCTCACCCTCTCCTAGTCCTTCTCCTCTTCCATCACAGATCCAACAGGCAATTCAGACAGCACTGAAGCTCTTCTTGCAGCCATAGCAGATGCAGCCAAAGGTCCAAGTGTAGGGTTCTTAATGAAGGACATCAAAGACCTTGGAGGTGCTCAGATTAATCTTGAGGGTGGAAAGTACATAATTAGCAAACCACTGCAGTTGCCACTGGCCGGGGTTGGAAACCTCATGATACATGGGGGAACTATAAGAGCCTCATATAATTTTCCACCAGATGGGCATCTCATAGACTTGTCCACCTCAGGAGAAAGCAACTCCTACAATTATGAGTACATAACTCTCAAGGACCTCTTGCTAGACTCAAACTTCAGGGGAGGGGGCATTTCAGTCAAAAAAACACTTAGAATCAACATAGAAAATTGTTACATCACACATTTCAACACCACTGGAATTTTAGTCCAAGGTGGCCATGAAACCTACATAAGAAACACCTTCCTTGGCCAGCACATCACTGCTGGAGGGGACAAACATGAAAGGGACTTCTCAGGCACTGGAATAAGCCTTCTGGGAAATGACAATGCAGTAACAGATGTTGTGATTTTCTCTGCTGAAATAGGAATAATTGTCACTGGCCAAGCCAACACTCTTTCTGGAGTACATTGCTACAATAAGGCCACCGGCTTCGGTGGCAAAGGGATTTATTTGAAGCTTCCTGGTTTGACACAAACTAGGATTGTGAATTGTTACATGGATTACACCAATATTGTCGCCGAAGATCCAGTTCAGCTCCACATCTCTAGCAGTTTCTTCCTTGGTGATGCTGGTATTGTGTTAAAATCAGTCAATGGGATTGTAAGTGGTCTCAATATTGTTGATAACATGTTCTCCGGCTTGAATAAAGGGGTTGATATAGTCAAGTTGGACCAATCAAATAGTCCTTTTAATCAAATTGATCAAGTTTTTGTGGCTAGAAATGTTGTGAGGGGTATGAACTTAAAGGCCACAACTGCAAAAATGTCTTTGCTTGGTAATGGAACCACATGGACTTCTGATTTTACCAAAGTTTTGCTTTTCCCTAACCTTATCAAACATGTTGTGTACTCCTTAAGTGCCAATGGCAACACCTTCCCAAATCATGCTCTCAGAAACGTTTCTCAGAATCGTGTTGTGATCGAAACGGATGAGGCTGTGAATGCAAATGTTTTTGTCACAGTGGATCAAGGTAATGCAAGTTGAAGAAAGTTAGAACTTAGAAGGTGGTGGCCAAAAAGTTGTTGGATCAAGAAATTCTGATTGAAGAGGGAATTGTGCATAGCCTGGTTGCGAATTCTCTCTTTATTTTATTTTTTGGATAGCATTAAATTTATGAATGTAAGCATAGTACAAAGATTTCAGATTGTATGTTTCAAGTTATTAAATACATTATACATTAAACTGTAAATAAAGGGAATAATATTTTATAGGAAACAATTCTCATTAGT
Coding sequences of Glyma.19g032600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NT Limit To All Plant Sequences
>Glyma.19g032600.1 sequence-type=CDS polypeptide=Glyma.19g032600.1.p locus=Glyma.19g032600 ID=Glyma.19g032600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAACAATATCTCCAATGTGGTTCATACTTCTTGGAATAACTTGTTTCTGTGTGACTGATTCTTATGGGGCGAACATGCCTCTAAGGACTCTTTATGGTGGCACTCATCAAGAAGCATTGCTTGGACTTGAGGCATTCAAGGCCTCTATAACTAGGCGTGACTCCATTGCTTCAACACCACCTTCATTCTCACCCTCTCCTAGTCCTTCTCCTCTTCCATCACAGGATCTCAAGAAATCACATGTGTACCTTGTGACATCTTATGGTGCAGATCCAACAGGCAATTCAGACAGCACTGAAGCTCTTCTTGCAGCCATAGCAGATGCAGCCAAAGGTCCAAGTGTAGGGTTCTTAATGAAGGACATCAAAGACCTTGGAGGTGCTCAGATTAATCTTGAGGGTGGAAAGTACATAATTAGCAAACCACTGCAGTTGCCACTGGCCGGGGTTGGAAACCTCATGATACATGGGGGAACTATAAGAGCCTCATATAATTTTCCACCAGATGGGCATCTCATAGACTTGTCCACCTCAGGAGAAAGCAACTCCTACAATTATGAGTACATAACTCTCAAGGACCTCTTGCTAGACTCAAACTTCAGGGGAGGGGGCATTTCAGTCAAAAAAACACTTAGAATCAACATAGAAAATTGTTACATCACACATTTCAACACCACTGGAATTTTAGTCCAAGGTGGCCATGAAACCTACATAAGAAACACCTTCCTTGGCCAGCACATCACTGCTGGAGGGGACAAACATGAAAGGGACTTCTCAGGCACTGGAATAAGCCTTCTGGGAAATGACAATGCAGTAACAGATGTTGTGATTTTCTCTGCTGAAATAGGAATAATTGTCACTGGCCAAGCCAACACTCTTTCTGGAGTACATTGCTACAATAAGGCCACCGGCTTCGGTGGCAAAGGGATTTATTTGAAGCTTCCTGGTTTGACACAAACTAGGATTGTGAATTGTTACATGGATTACACCAATATTGTCGCCGAAGATCCAGTTCAGCTCCACATCTCTAGCAGTTTCTTCCTTGGTGATGCTGGTATTGTGTTAAAATCAGTCAATGGGATTGTAAGTGGTCTCAATATTGTTGATAACATGTTCTCCGGCTTGAATAAAGGGGTTGATATAGTCAAGTTGGACCAATCAAATAGTCCTTTTAATCAAATTGATCAAGTTTTTGTGGCTAGAAATGTTGTGAGGGGTATGAACTTAAAGGCCACAACTGCAAAAATGTCTTTGCTTGGTAATGGAACCACATGGACTTCTGATTTTACCAAAGTTTTGCTTTTCCCTAACCTTATCAAACATGTTGTGTACTCCTTAAGTGCCAATGGCAACACCTTCCCAAATCATGCTCTCAGAAACGTTTCTCAGAATCGTGTTGTGATCGAAACGGATGAGGCTGTGAATGCAAATGTTTTTGTCACAGTGGATCAAGGTAATGCAAGTTGA
>Glyma.19g032600.2 sequence-type=CDS polypeptide=Glyma.19g032600.2.p locus=Glyma.19g032600 ID=Glyma.19g032600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGACATCAAAGACCTTGGAGGTGCTCAGATTAATCTTGAGGGTGGAAAGTACATAATTAGCAAACCACTGCAGTTGCCACTGGCCGGGGTTGGAAACCTCATGATACATGGGGGAACTATAAGAGCCTCATATAATTTTCCACCAGATGGGCATCTCATAGACTTGTCCACCTCAGGAGAAAGCAACTCCTACAATTATGAGTACATAACTCTCAAGGACCTCTTGCTAGACTCAAACTTCAGGGGAGGGGGCATTTCAGTCAAAAAAACACTTAGAATCAACATAGAAAATTGTTACATCACACATTTCAACACCACTGGAATTTTAGTCCAAGGTGGCCATGAAACCTACATAAGAAACACCTTCCTTGGCCAGCACATCACTGCTGGAGGGGACAAACATGAAAGGGACTTCTCAGGCACTGGAATAAGCCTTCTGGGAAATGACAATGCAGTAACAGATGTTGTGATTTTCTCTGCTGAAATAGGAATAATTGTCACTGGCCAAGCCAACACTCTTTCTGGAGTACATTGCTACAATAAGGCCACCGGCTTCGGTGGCAAAGGGATTTATTTGAAGCTTCCTGGTTTGACACAAACTAGGATTGTGAATTGTTACATGGATTACACCAATATTGTCGCCGAAGATCCAGTTCAGCTCCACATCTCTAGCAGTTTCTTCCTTGGTGATGCTGGTATTGTGTTAAAATCAGTCAATGGGATTGTAAGTGGTCTCAATATTGTTGATAACATGTTCTCCGGCTTGAATAAAGGGGTTGATATAGTCAAGTTGGACCAATCAAATAGTCCTTTTAATCAAATTGATCAAGTTTTTGTGGCTAGAAATGTTGTGAGGGGTATGAACTTAAAGGCCACAACTGCAAAAATGTCTTTGCTTGGTAATGGAACCACATGGACTTCTGATTTTACCAAAGTTTTGCTTTTCCCTAACCTTATCAAACATGTTGTGTACTCCTTAAGTGCCAATGGCAACACCTTCCCAAATCATGCTCTCAGAAACGTTTCTCAGAATCGTGTTGTGATCGAAACGGATGAGGCTGTGAATGCAAATGTTTTTGTCACAGTGGATCAAGGTAATGCAAGTTGA
Predicted protein sequences of Glyma.19g032600
Show Sequence BLAST Sequence at SoyBase BLAST Sequence against GenBank NR Limit To All Plant Sequences
>Glyma.19g032600.1.p sequence-type=predicted peptide transcript=Glyma.19g032600.1 locus=Glyma.19g032600 ID=Glyma.19g032600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MATISPMWFILLGITCFCVTDSYGANMPLRTLYGGTHQEALLGLEAFKASITRRDSIASTPPSFSPSPSPSPLPSQDLKKSHVYLVTSYGADPTGNSDSTEALLAAIADAAKGPSVGFLMKDIKDLGGAQINLEGGKYIISKPLQLPLAGVGNLMIHGGTIRASYNFPPDGHLIDLSTSGESNSYNYEYITLKDLLLDSNFRGGGISVKKTLRINIENCYITHFNTTGILVQGGHETYIRNTFLGQHITAGGDKHERDFSGTGISLLGNDNAVTDVVIFSAEIGIIVTGQANTLSGVHCYNKATGFGGKGIYLKLPGLTQTRIVNCYMDYTNIVAEDPVQLHISSSFFLGDAGIVLKSVNGIVSGLNIVDNMFSGLNKGVDIVKLDQSNSPFNQIDQVFVARNVVRGMNLKATTAKMSLLGNGTTWTSDFTKVLLFPNLIKHVVYSLSANGNTFPNHALRNVSQNRVVIETDEAVNANVFVTVDQGNAS*
>Glyma.19g032600.2.p sequence-type=predicted peptide transcript=Glyma.19g032600.2 locus=Glyma.19g032600 ID=Glyma.19g032600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKDIKDLGGAQINLEGGKYIISKPLQLPLAGVGNLMIHGGTIRASYNFPPDGHLIDLSTSGESNSYNYEYITLKDLLLDSNFRGGGISVKKTLRINIENCYITHFNTTGILVQGGHETYIRNTFLGQHITAGGDKHERDFSGTGISLLGNDNAVTDVVIFSAEIGIIVTGQANTLSGVHCYNKATGFGGKGIYLKLPGLTQTRIVNCYMDYTNIVAEDPVQLHISSSFFLGDAGIVLKSVNGIVSGLNIVDNMFSGLNKGVDIVKLDQSNSPFNQIDQVFVARNVVRGMNLKATTAKMSLLGNGTTWTSDFTKVLLFPNLIKHVVYSLSANGNTFPNHALRNVSQNRVVIETDEAVNANVFVTVDQGNAS*