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Report for Sequence Feature Glyma.19g018000

Feature Type:gene_model
Chromosome:Gm19
Start:1836791
stop:1839681
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.19g018000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G20370.1AT JGI N/AIEA
4.2.1.70EC pseudouridylate synthase JGI N/AIEA
5.4.99.12EC tRNA pseudouridine38-40 synthase JGI N/AIEA
GO:0001522GO-bp pseudouridine synthesis JGI N/AIEA
GO:0009451GO-bp RNA modification JGI N/AIEA
GO:0003723GO-mf RNA binding JGI N/AIEA
GO:0009982GO-mf pseudouridine synthase activity JGI N/AIEA
KOG2553 KOG Pseudouridylate synthase JGI N/AIEA
PTHR11142PantherFam PSEUDOURIDYLATE SYNTHASE JGI N/AIEA
PTHR11142:SF4PantherFam TRNA PSEUDOURIDINE SYNTHASE A JGI N/AIEA
PF01416Pfam tRNA pseudouridine synthase JGI N/AIEA

Gene model name correspondences to Glyma.19g018000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g02100 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.19g018000
>Glyma.19g018000.2 sequence-type=CDS polypeptide=Glyma.19g018000.2.p locus=Glyma.19g018000 id=Glyma.19g018000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAAACTCAGATACGAAGCTGACAACTTCATCCCTGCCTCCACCACCTCCAGTATCTGCGGAGGAGCCAGAGCCCAAGAAGTTGAAGATGTCCACCACAACTTCTGATGATGAAGAATGTGCAGCTGGCACAGGCACCAAGAAAAGATACAAGCGCCGTAAGGTTGCTATTTTCTTTGCTTACTGTGGTGTTGGTTATCAGGGTATGCAGAAAAACCCTGGTGCAAAGACTATTGAAGGTGACCTAGAAGAAGTCTTGTATGTGTCTGGAGCTGTCCCTGAACAGGATCGTGGAGTCCCTAAACGATATGACTGGGCTCGCTCAGCTAGAACTGATAAAGGAGTTAGTGCTGTTGGTCAGGTTGTCTCAGGCCGGTTCTATATTGATCCACCTGGCCTTGTTGACCGCCTTAATTCAAACCTTCCTTCTCAGATAAGGATCTTTGGTTACAAACGTGTGACAGCTTCTTTTAATGCCAAGAAGTTTTGCGACCGGAGGAGGTATGTCTACCTCATTCCTGTGTTTGCTCTTGATCCTAGCTGTCATCGTGATAGAGAGACCGTCATGGCTAGTTTGGGATCTGGAAATGAGCTTGTTAAGTGTTTGGAGTGTTCTGAGAGGGGCCGAAAGGTGATAGGATTAGTTGGTAATCGTAAGAAGAATCTGGAACTAGAAGCTGTGGATGTCGAGGCTGGTATTTCATCAAACAGAGACTCTGGAGTTACAGAGGATGTGGAGGTTTCTTTGAGCAAAGGTGATGATAATCATTTAAATGAGGAATATGGGAATGATAATAAGGGTGGCATGAACTCTAAAACTGGCCTTGAGACTATGGTTCCGGTTCAGGAAGAGGGTACTCCTTTTAATGGTGAATCTGTGAATAATTCAGACATTCTTGAGGATGAAAAAGTTAATGGTGAGGATAAGCTAACCAATGGAAGTGGGTTTTGTTATGGTGAGAAGGAGAGAGAGAGATTTAATAAGATTTTGAAGTATTTCGTCGGGACTCATAATTTCCATAACTTCACCACCAGAACAAAAGCTGAGGACCCCGCTGCTCGACGTTACATTATTTCATTGAATGCAAACACCACTCTTGTAGTTGAAGGCATGGAATTTGTAAAGTGTGAGGTCGTGGGACAGAGCTTCATGCTTCATCAGATACGGAAGATGATTGGGATGGCAGTGGCAATCATGAGAAATTGTGCACCGGAGTCACTTATCGATAAAGCTTTGCAGCAGGATGTTAACATTAATGTGCCTACTGCCCCTGAGGTTGGATTATATTTGGATGAGTGCTTCTTTACTTCATATAACCAGAAGTGGAAAGATCATGAAGAGTTGTCCATGAAAGCATATGAAAAAGATGCTGAGGAGTTCAAAATGAAGTACATATACTCTCATATTGCTTCCACAGAACAGAAGGAAGGAACTGTCGCTCTTTGGTTGCATTCTTTGAACCATAGAAATTATCCAGATCTGCATGTTATCAATGAGGAAGCCATCCCCGATAACAAGAGTGCTGATCCCAAAGAAGCCATCACTGATAACAAGAGTGCTGATCCCAAAGATGCCATCACCGATAACAAGGGTGCTGATCTCGAAGAACACATCACCGATAACAATCCTGTAGTTGTGACTCAGTGA
Predicted protein sequences of Glyma.19g018000
>Glyma.19g018000.2.p sequence-type=predicted peptide transcript=Glyma.19g018000.2 locus=Glyma.19g018000 id=Glyma.19g018000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MENSDTKLTTSSLPPPPPVSAEEPEPKKLKMSTTTSDDEECAAGTGTKKRYKRRKVAIFFAYCGVGYQGMQKNPGAKTIEGDLEEVLYVSGAVPEQDRGVPKRYDWARSARTDKGVSAVGQVVSGRFYIDPPGLVDRLNSNLPSQIRIFGYKRVTASFNAKKFCDRRRYVYLIPVFALDPSCHRDRETVMASLGSGNELVKCLECSERGRKVIGLVGNRKKNLELEAVDVEAGISSNRDSGVTEDVEVSLSKGDDNHLNEEYGNDNKGGMNSKTGLETMVPVQEEGTPFNGESVNNSDILEDEKVNGEDKLTNGSGFCYGEKERERFNKILKYFVGTHNFHNFTTRTKAEDPAARRYIISLNANTTLVVEGMEFVKCEVVGQSFMLHQIRKMIGMAVAIMRNCAPESLIDKALQQDVNINVPTAPEVGLYLDECFFTSYNQKWKDHEELSMKAYEKDAEEFKMKYIYSHIASTEQKEGTVALWLHSLNHRNYPDLHVINEEAIPDNKSADPKEAITDNKSADPKDAITDNKGADLEEHITDNNPVVVTQ*






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