Glyma.19g011800

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Report for Sequence Feature Glyma.19g011800

Feature Type:	gene_model
Chromosome:	Gm19
Start:	1134716
stop:	1143232
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.19g011800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT3G01420.1	AT	Peroxidase superfamily protein	JGI	N/A	IEA
GO:0006979	GO-bp	response to oxidative stress	EnsemblGenomes	N/A	IEA
GO:0006979	GO-bp	response to oxidative stress	JGI	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	EnsemblGenomes	N/A	IEA
GO:0055114	GO-bp	oxidation-reduction process	JGI	N/A	IEA
GO:0098869	GO-bp	cellular oxidant detoxification	EnsemblGenomes	N/A	IEA
GO:0004601	GO-mf	peroxidase activity	EnsemblGenomes	N/A	IEA
GO:0004601	GO-mf	peroxidase activity	JGI	N/A	IEA
GO:0020037	GO-mf	heme binding	EnsemblGenomes	N/A	IEA
GO:0020037	GO-mf	heme binding	JGI	N/A	IEA
KOG2408	KOG	Peroxidase/oxygenase	JGI	N/A	IEA
PTHR11903	Panther	PROSTAGLANDIN G/H SYNTHASE	JGI	N/A	IEA
PTHR11903:SF2	Panther		JGI	N/A	IEA
PF03098	PFAM	Animal haem peroxidase	JGI	N/A	IEA
PWY-2501	SoyCyc9	fatty acid α-oxidation I	Plant Metabolic Network		ISS
GN7V-47553	SoyCyc9-rxn	fatty acid α-dioxygenase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.19g011800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g011800 not represented in the dataset	Glyma.19g011800 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.19g011800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma19g01480	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.19g011800

Limit To All Plant Sequences

>Glyma.19g011800.2 sequence-type=transcript locus=Glyma.19g011800 ID=Glyma.19g011800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAATATTGGCAGTAAAACTTCTTACTCTAACCCTTATAAATACAGATGAGACCTTAGATAATGATGAACATAGACACATATATACTTATTACATTTCATCAAACTTAGCCCTAGCCAGAATTAGCCCTGTTGTGTCATCGATCTCACAAGAGAGCAATATCATGTGGTCTCTAGTAACGGATCTCATTAGAGCTCTTGCAGCAAGAGTTATACACCAACTCATCCATAAAGATTTCCATGAAGCAGTGGCTAGGATGACAATAATAGACGCTTTTCTCTTCATCGTGCAATCCCTTCTTCATCTTAATTATCATTTAAAATAAAATGTTTTTAATCTCTATATTTTCGTTAAATCTTATGTTTATATTATCATTTATTACATGATTAATTTCTAATGTGTTTGTGCATGTGTATTCATGTCCTAGCTAGTAGAAGTAATTGATCTAATGAATTTATATACGATCATGATTGCATGGTTATTATTCTAATTCTTCCTTCCGTTTTTTTTCCTTTGCATGTGGCATACGCAGATTGTACACTCCATAGACAAGTTGGGGTTATGGCATCGTTTGCCTGTTTTCTTTGGACTATTATACTTGGGCATTCGTCGTCACCTTCAACAACAATACAACCTCTTCAACGTTGGAACAACACCAGTAGGAATTAGGTTCAACCCTTCTGATTTTCCATACAGAACAGATGATGGAAAATATAATGACCCTTTCAACGAAGTTGCTGGCAGCCAAGGGTCTTTCTTTGGCAGAAATATTCTCCCTGTAGATCATAAAAACAAGCTGTTGAAGCCTGATCCAATGGTGGTAGCCACGAAACTACTAGCTAGGAGGACATACAAGGACACTGGGAAGCAATTCAATGTGATAGCAGCTTCTTGGATTCAGTTTATGATTCATGATTGGATCGATCATCTAGAGGACACCAATCAGATTGAACTCATCGCACCAAGAGAAGTTGCAAGCCAATGCCCTCTCAAATCTTTCAAGTTCTACAAGACAAAGGAAATTCCCACTGGCTTCTTTGAGATCAAATCCGGATCGTCAAACATCCGTACACCTTGGTGGGATGGAAGCGTCATATATGGAAGCAATAGAGAAGTTTTAGAGAAAGTGAGAACTTTCAAAGATGGGAAGATAAAGATATCAAAGGATGGTCATCTTCTCCATAACGAAAATGGAACAGCAATTTCAGGTGATGTCCGGAATAGTTGGGCTGGTGTTTCAACCTTGCAGGCACTTTTCACTCAAGAGCACAATGCAGTATGTGATGCTCTCAAGAGTAATTATCCTCACTTGGAAGATGAAGAAGTTTATCGTCATGCAAGATTGGTGACCTCAGCTGTGATTGCAAAGGTTCATACTATCGATTGGACCGTAGAGCTCCTTAAAACTGACACTTTACTAGCAGCAATGCATGCTAATTGGTATGGATTATTGGGGAAGACATTTAAGGATACATTTGGGCATGTTGGTGGAGCCGCCTTGGGTGGACTAGTGGGTCTTAAGAGACCAGAAAATCATGGTGTCACATACTCTTTAACTGAGGAATTTGTGAGTGCTTATAGAATACACTCACTCTTGCCTGATAACTTGCAATTGAGAGACATATCTGCTACCCCAGGACCTAACAAATCTCCACCATTAATCAAAGAGATTCCTATGAAAAATTTGATTGGAGTGCAAGGAGAAGAAGCATTGACAAAAATAGGAGTTGAAAGGCAACTTGTGTCAATGGGTCATCAAGCTTGTGGGGCCCTAGAGCTTTGGAACTATCCATTGTGGCTCAGAGATCTTGTACCACAGAACATAGATGGAACCGAAAGGAAAGATCATATAGATCTTGCTGCTCTTGAAATTTACAGGGATAGAGAGAGGAGTGTGGCTAGATATAACCAATTCAGAAGGGCTTTATTGTTGATACCTATCTCCAAGTGGGAAGATCTAACAGATGACCAAGAAGCAATTCAAGTATTGGAAGAGGTATATGGTGATGACATTGAAGAGTTAGATCTACTAGTAGGCCTCATGGCAGAGAAGAAAATAAAGGGTTTTGCAATTAGCGAGACAGCTTTTACAATATTCATATTCATGTCAAGCAGGAGGCTAGAAGCTGACAGATTCTTCACTAGTAATTTTAATGAGGATGCGTATACCAAGAAAGGACTAGAATGGGTGAACACAACTGAGAGCTTGAAGAATGTGATTGATCGTCACTATCCTGAAATAACACATAAGTGGTTAAACTCTTCGAGTGTTTTTTCTGTTTGGAACTCACCCCCAAACACTCAAAATCCCATTCCTTTATACCTTCGTGTTCCCCATTAATCTATTTCTACTAATATTTGGCTTTCTTTTTCAAAAAAAAAAATGGATTTCTGTCTTTATTGTAGTTGAGTTGAAGTATATAATCTATCTTAATTGTATCTTGAATTTGACTATTTTTATGTTTGTATTTAGTCGTCTTAAACAATATTTCATTTTATTTTTATTGGAT

Coding sequences of Glyma.19g011800

Limit To All Plant Sequences

>Glyma.19g011800.1 sequence-type=CDS polypeptide=Glyma.19g011800.1.p locus=Glyma.19g011800 ID=Glyma.19g011800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGGTCTCTAGTAACGGATCTCATTAGAGCTCTTGCAGCAAGAGTTATACACCAACTCATCCATAAAGATTTCCATGAAGCAGTGGCTAGGATGACAATAATAGACGCTTTTCTCTTCATCATTGTACACTCCATAGACAAGTTGGGGTTATGGCATCGTTTGCCTGTTTTCTTTGGACTATTATACTTGGGCATTCGTCGTCACCTTCAACAACAATACAACCTCTTCAACGTTGGAACAACACCAGTAGGAATTAGGTTCAACCCTTCTGATTTTCCATACAGAACAGATGATGGAAAATATAATGACCCTTTCAACGAAGTTGCTGGCAGCCAAGGGTCTTTCTTTGGCAGAAATATTCTCCCTGTAGATCATAAAAACAAGCTGTTGAAGCCTGATCCAATGGTGGTAGCCACGAAACTACTAGCTAGGAGGACATACAAGGACACTGGGAAGCAATTCAATGTGATAGCAGCTTCTTGGATTCAGTTTATGATTCATGATTGGATCGATCATCTAGAGGACACCAATCAGATTGAACTCATCGCACCAAGAGAAGTTGCAAGCCAATGCCCTCTCAAATCTTTCAAGTTCTACAAGACAAAGGAAATTCCCACTGGCTTCTTTGAGATCAAATCCGGATCGTCAAACATCCGTACACCTTGGTGGGATGGAAGCGTCATATATGGAAGCAATAGAGAAGTTTTAGAGAAAGTGAGAACTTTCAAAGATGGGAAGATAAAGATATCAAAGGATGGTCATCTTCTCCATAACGAAAATGGAACAGCAATTTCAGGTGATGTCCGGAATAGTTGGGCTGGTGTTTCAACCTTGCAGGCACTTTTCACTCAAGAGCACAATGCAGTATGTGATGCTCTCAAGAGTAATTATCCTCACTTGGAAGATGAAGAAGTTTATCGTCATGCAAGATTGGTGACCTCAGCTGTGATTGCAAAGGTTCATACTATCGATTGGACCGTAGAGCTCCTTAAAACTGACACTTTACTAGCAGCAATGCATGCTAATTGGTATGGATTATTGGGGAAGACATTTAAGGATACATTTGGGCATGTTGGTGGAGCCGCCTTGGGTGGACTAGTGGGTCTTAAGAGACCAGAAAATCATGGTGTCACATACTCTTTAACTGAGGAATTTGTGAGTGCTTATAGAATACACTCACTCTTGCCTGATAACTTGCAATTGAGAGACATATCTGCTACCCCAGGACCTAACAAATCTCCACCATTAATCAAAGAGATTCCTATGAAAAATTTGATTGGAGTGCAAGGAGAAGAAGCATTGACAAAAATAGGAGTTGAAAGGCAACTTGTGTCAATGGGTCATCAAGCTTGTGGGGCCCTAGAGCTTTGGAACTATCCATTGTGGCTCAGAGATCTTGTACCACAGAACATAGATGGAACCGAAAGGAAAGATCATATAGATCTTGCTGCTCTTGAAATTTACAGGGATAGAGAGAGGAGTGTGGCTAGATATAACCAATTCAGAAGGGCTTTATTGTTGATACCTATCTCCAAGTGGGAAGATCTAACAGATGACCAAGAAGCAATTCAAGTATTGGAAGAGGTATATGGTGATGACATTGAAGAGTTAGATCTACTAGTAGGCCTCATGGCAGAGAAGAAAATAAAGGGTTTTGCAATTAGCGAGACAGCTTTTACAATATTCATATTCATGTCAAGCAGGAGGCTAGAAGCTGACAGATTCTTCACTAGTAATTTTAATGAGGATGCGTATACCAAGAAAGGACTAGAATGGGTGAACACAACTGAGAGCTTGAAGAATGTGATTGATCGTCACTATCCTGAAATAACACATAAGTGGTTAAACTCTTCGAGTGTTTTTTCTGTTTGGAACTCACCCCCAAACACTCAAAATCCCATTCCTTTATACCTTCGTGTTCCCCATTAA

>Glyma.19g011800.2 sequence-type=CDS polypeptide=Glyma.19g011800.2.p locus=Glyma.19g011800 ID=Glyma.19g011800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTGGCATACGCAGATTGTACACTCCATAGACAAGTTGGGGTTATGGCATCGTTTGCCTGTTTTCTTTGGACTATTATACTTGGGCATTCGTCGTCACCTTCAACAACAATACAACCTCTTCAACGTTGGAACAACACCAGTAGGAATTAGGTTCAACCCTTCTGATTTTCCATACAGAACAGATGATGGAAAATATAATGACCCTTTCAACGAAGTTGCTGGCAGCCAAGGGTCTTTCTTTGGCAGAAATATTCTCCCTGTAGATCATAAAAACAAGCTGTTGAAGCCTGATCCAATGGTGGTAGCCACGAAACTACTAGCTAGGAGGACATACAAGGACACTGGGAAGCAATTCAATGTGATAGCAGCTTCTTGGATTCAGTTTATGATTCATGATTGGATCGATCATCTAGAGGACACCAATCAGATTGAACTCATCGCACCAAGAGAAGTTGCAAGCCAATGCCCTCTCAAATCTTTCAAGTTCTACAAGACAAAGGAAATTCCCACTGGCTTCTTTGAGATCAAATCCGGATCGTCAAACATCCGTACACCTTGGTGGGATGGAAGCGTCATATATGGAAGCAATAGAGAAGTTTTAGAGAAAGTGAGAACTTTCAAAGATGGGAAGATAAAGATATCAAAGGATGGTCATCTTCTCCATAACGAAAATGGAACAGCAATTTCAGGTGATGTCCGGAATAGTTGGGCTGGTGTTTCAACCTTGCAGGCACTTTTCACTCAAGAGCACAATGCAGTATGTGATGCTCTCAAGAGTAATTATCCTCACTTGGAAGATGAAGAAGTTTATCGTCATGCAAGATTGGTGACCTCAGCTGTGATTGCAAAGGTTCATACTATCGATTGGACCGTAGAGCTCCTTAAAACTGACACTTTACTAGCAGCAATGCATGCTAATTGGTATGGATTATTGGGGAAGACATTTAAGGATACATTTGGGCATGTTGGTGGAGCCGCCTTGGGTGGACTAGTGGGTCTTAAGAGACCAGAAAATCATGGTGTCACATACTCTTTAACTGAGGAATTTGTGAGTGCTTATAGAATACACTCACTCTTGCCTGATAACTTGCAATTGAGAGACATATCTGCTACCCCAGGACCTAACAAATCTCCACCATTAATCAAAGAGATTCCTATGAAAAATTTGATTGGAGTGCAAGGAGAAGAAGCATTGACAAAAATAGGAGTTGAAAGGCAACTTGTGTCAATGGGTCATCAAGCTTGTGGGGCCCTAGAGCTTTGGAACTATCCATTGTGGCTCAGAGATCTTGTACCACAGAACATAGATGGAACCGAAAGGAAAGATCATATAGATCTTGCTGCTCTTGAAATTTACAGGGATAGAGAGAGGAGTGTGGCTAGATATAACCAATTCAGAAGGGCTTTATTGTTGATACCTATCTCCAAGTGGGAAGATCTAACAGATGACCAAGAAGCAATTCAAGTATTGGAAGAGGTATATGGTGATGACATTGAAGAGTTAGATCTACTAGTAGGCCTCATGGCAGAGAAGAAAATAAAGGGTTTTGCAATTAGCGAGACAGCTTTTACAATATTCATATTCATGTCAAGCAGGAGGCTAGAAGCTGACAGATTCTTCACTAGTAATTTTAATGAGGATGCGTATACCAAGAAAGGACTAGAATGGGTGAACACAACTGAGAGCTTGAAGAATGTGATTGATCGTCACTATCCTGAAATAACACATAAGTGGTTAAACTCTTCGAGTGTTTTTTCTGTTTGGAACTCACCCCCAAACACTCAAAATCCCATTCCTTTATACCTTCGTGTTCCCCATTAA

Predicted protein sequences of Glyma.19g011800

Limit To All Plant Sequences

>Glyma.19g011800.1.p sequence-type=predicted peptide transcript=Glyma.19g011800.1 locus=Glyma.19g011800 ID=Glyma.19g011800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MWSLVTDLIRALAARVIHQLIHKDFHEAVARMTIIDAFLFIIVHSIDKLGLWHRLPVFFGLLYLGIRRHLQQQYNLFNVGTTPVGIRFNPSDFPYRTDDGKYNDPFNEVAGSQGSFFGRNILPVDHKNKLLKPDPMVVATKLLARRTYKDTGKQFNVIAASWIQFMIHDWIDHLEDTNQIELIAPREVASQCPLKSFKFYKTKEIPTGFFEIKSGSSNIRTPWWDGSVIYGSNREVLEKVRTFKDGKIKISKDGHLLHNENGTAISGDVRNSWAGVSTLQALFTQEHNAVCDALKSNYPHLEDEEVYRHARLVTSAVIAKVHTIDWTVELLKTDTLLAAMHANWYGLLGKTFKDTFGHVGGAALGGLVGLKRPENHGVTYSLTEEFVSAYRIHSLLPDNLQLRDISATPGPNKSPPLIKEIPMKNLIGVQGEEALTKIGVERQLVSMGHQACGALELWNYPLWLRDLVPQNIDGTERKDHIDLAALEIYRDRERSVARYNQFRRALLLIPISKWEDLTDDQEAIQVLEEVYGDDIEELDLLVGLMAEKKIKGFAISETAFTIFIFMSSRRLEADRFFTSNFNEDAYTKKGLEWVNTTESLKNVIDRHYPEITHKWLNSSSVFSVWNSPPNTQNPIPLYLRVPH*

>Glyma.19g011800.2.p sequence-type=predicted peptide transcript=Glyma.19g011800.2 locus=Glyma.19g011800 ID=Glyma.19g011800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MWHTQIVHSIDKLGLWHRLPVFFGLLYLGIRRHLQQQYNLFNVGTTPVGIRFNPSDFPYRTDDGKYNDPFNEVAGSQGSFFGRNILPVDHKNKLLKPDPMVVATKLLARRTYKDTGKQFNVIAASWIQFMIHDWIDHLEDTNQIELIAPREVASQCPLKSFKFYKTKEIPTGFFEIKSGSSNIRTPWWDGSVIYGSNREVLEKVRTFKDGKIKISKDGHLLHNENGTAISGDVRNSWAGVSTLQALFTQEHNAVCDALKSNYPHLEDEEVYRHARLVTSAVIAKVHTIDWTVELLKTDTLLAAMHANWYGLLGKTFKDTFGHVGGAALGGLVGLKRPENHGVTYSLTEEFVSAYRIHSLLPDNLQLRDISATPGPNKSPPLIKEIPMKNLIGVQGEEALTKIGVERQLVSMGHQACGALELWNYPLWLRDLVPQNIDGTERKDHIDLAALEIYRDRERSVARYNQFRRALLLIPISKWEDLTDDQEAIQVLEEVYGDDIEELDLLVGLMAEKKIKGFAISETAFTIFIFMSSRRLEADRFFTSNFNEDAYTKKGLEWVNTTESLKNVIDRHYPEITHKWLNSSSVFSVWNSPPNTQNPIPLYLRVPH*

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