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Report for Sequence Feature Glyma.19g002700

Feature Type:gene_model
Chromosome:Gm19
Start:179198
stop:181038
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.19g002700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G01640.1AT glucuronokinase G JGI N/AIEA
PWY-4841SoyCyc9 UDP-α-D-glucuronate biosynthesis (from myo-inositol) Plant Metabolic Network ISS
GN7V-67538SoyCyc9-rxn glucuronokinase Plant Metabolic Network ISS

Expression Patterns of Glyma.19g002700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.19g002700 not represented in the dataset
Glyma.19g002700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.19g002700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma19g00661 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.19g002700
>Glyma.19g002700.2 sequence-type=transcript locus=Glyma.19g002700 ID=Glyma.19g002700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
CCGTTCTTCATTTTCTTTGGTTTGCAATTCTTAGATAGAGGGAGGGTGATGGGGGAGATAGAGAAGAGAGGAGAAAGCAATGGGCATTGATAGTGATTCTGTGATATCTCACAAGGCGTATGCGAGGGTGGGTTTGCTCGGAAATCCAAGCGATGTGTATTACGGCAAAACGATATCGTTTAGCGTCGCCAACTTCTGCTCCACCGTCACGCTTGGTCCCTCCGACGAGCCCCTCCACGATCTTCGCGACCACAATTTCACTCCCTCCTACGCCATCAATATTCCTCGCCAGGTTAATGTTTGGAGGTGATGCCCTCGGGGATTTGAACCTAAAAATGGTAGAGGTTGCTAGACAGGTTGGAGCTGCATCAAAATTTACTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTTTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAATCTGTTTGAGGGTTTGAAAAATAGTTCTCAACAAAATAAAATTTTCATTCACTTAAGACGAGTTATAGATTATTCAATCTGCCCACCATTTTCATATGGTGAGCTAGCACACGGGTTTAAAGCTGGTGGGAGTTGGCATACTCAAAGCGCAATGACAGTTTTGTTTTGGTTACAGACAGAATAAACAGCCAAGATTTTAATTATAGAAGGAATTTAGTTTTTTAATGTAAGTTTGTTCCTTTTTGTTGAGAGGGGATCGAACTTGGAAGTTGTTTTTGTTGGCTTTTGATGAGGGTGGATCTGAGAGTTTGGTTTGTGGTATATTTTGGTTTCGTATGTTTATGGTTGGGATTTGGATCATATGGGCGGTGTTATATAGTTTATGTCTAAGCTTTGGGGGTGCTTTTAGCAGCATATATGAGACCTACAGGATACCTTTGTAATTTGCATCGCTTGTCTGGCCAATTTCATACATCTTGTGCGTAAGTTGGTTAGGTTTAATAAGAGAAAAACTCAAAATCTGCCATTTGTTTTTTTGCAAAAAAAGAAAATTATGGATTGACTTTGTTAAATAAGAGCTGCACTTTT
Coding sequences of Glyma.19g002700
>Glyma.19g002700.1 sequence-type=CDS polypeptide=Glyma.19g002700.1.p locus=Glyma.19g002700 ID=Glyma.19g002700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCGAGGGTGGGTTTGCTCGGAAATCCAAGCGATGTGTATTACGGCAAAACGATATCGTTTAGCGTCGCCAACTTCTGCTCCACCGTCACGCTTGGTCCCTCCGACGAGCCCCTCCACGATCTTCGCGACCACAATTTCACTCCCTCCTACGCCATCAATATTCCTCGCCAGGTTAATGTTTGGAGGTGATGCCCTCGGGGATTTGAACCTAAAAATGGTAGAGGTTGCTAGACAGGTTGGAGCTGCATCAAAATTTACTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTTTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAA

>Glyma.19g002700.2 sequence-type=CDS polypeptide=Glyma.19g002700.2.p locus=Glyma.19g002700 ID=Glyma.19g002700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCGAGGGTGGGTTTGCTCGGAAATCCAAGCGATGTGTATTACGGCAAAACGATATCGTTTAGCGTCGCCAACTTCTGCTCCACCGTCACGCTTGGTCCCTCCGACGAGCCCCTCCACGATCTTCGCGACCACAATTTCACTCCCTCCTACGCCATCAATATTCCTCGCCAGGTTAATGTTTGGAGGTGATGCCCTCGGGGATTTGAACCTAAAAATGGTAGAGGTTGCTAGACAGGTTGGAGCTGCATCAAAATTTACTCAAAAAGAAGGATTTGTGATACTACCTATTGAACCTTTTCCTTCTCGTCTAAATGAAATTGACTTGAAAACCTTGCAAATAAAGTAA
Predicted protein sequences of Glyma.19g002700
>Glyma.19g002700.1.p sequence-type=predicted peptide transcript=Glyma.19g002700.1 locus=Glyma.19g002700 ID=Glyma.19g002700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRGWVCSEIQAMCITAKRYRLASPTSAPPSRLVPPTSPSTIFATTISLPPTPSIFLARLMFGGDALGDLNLKMVEVARQVGAASKFTQKEGFVILPIEPFPSRLNEIDLKTLQIK*

>Glyma.19g002700.2.p sequence-type=predicted peptide transcript=Glyma.19g002700.2 locus=Glyma.19g002700 ID=Glyma.19g002700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRGWVCSEIQAMCITAKRYRLASPTSAPPSRLVPPTSPSTIFATTISLPPTPSIFLARLMFGGDALGDLNLKMVEVARQVGAASKFTQKEGFVILPIEPFPSRLNEIDLKTLQIK*






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