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Report for Sequence Feature Glyma.18g299000

Feature Type:gene_model
Chromosome:Gm18
Start:57670462
stop:57673006
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g299000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G20370.1AT PEBP (phosphatidylethanolamine-binding protein) family protein JGI N/AIEA
KOG3346 KOG Phosphatidylethanolamine binding protein JGI N/AIEA
PTHR11362Panther PHOSPHATIDYLETHANOLAMINE-BINDING PROTEIN JGI N/AIEA
PF01161PFAM Phosphatidylethanolamine-binding protein JGI N/AIEA

Proteins Associated with Glyma.18g299000
LocusGene SymbolProtein Name
FT1b Flowering locus T gene 1b
TSF1 Twin sister of FT gene 1
FT1B protein flowering locus T1b

Expression Patterns of Glyma.18g299000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g299000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g53690 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g299000
>Glyma.18g299000.1 sequence-type=CDS polypeptide=Glyma.18g299000.1.p locus=Glyma.18g299000 ID=Glyma.18g299000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGACCCTCTTGTCATTGGACGTGTAGTAGGAGATGTTTTGGAGCCTTTCACTAGTTGCGTCTCTCTTAGGATTCTATATGACAGCTGCTCCGAAGTTATCAACTGCTGTGAGCTCAAACCCTTCCAAATCATCAACCAACCTAGAGTTGAAGTTGGTGGTGATGACTTCAGGACCTTTTACACCCTGGTAATGGTGGATCCTGATGCACCTAGCCCAGGAAATCCAAATCAGAGGGAATATTTGCACTGGTTGGTAACCAATATTCCAGGAACTACAGGAGCAAACTTCGGTGAAGAGGTTGTGAGCTATGAGAGTCCACGACCGATGATGGGAATTCATCGTATTATTTTCATATTATTTCGTCAGTCAGGTAGACAAACTATATATGCTCCAGGATGGCGTCAAAATTTCAACACGAGAGATTTCAGCGAGGTTTATAATCTTGGATTACCAGTGGCAGCAACCTACTTCAACTGTAAACGTCAAAATAATTCCGCAAGAGATGGAAGAAGGACATGA
Predicted protein sequences of Glyma.18g299000
>Glyma.18g299000.1.p sequence-type=predicted peptide transcript=Glyma.18g299000.1 locus=Glyma.18g299000 ID=Glyma.18g299000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDPLVIGRVVGDVLEPFTSCVSLRILYDSCSEVINCCELKPFQIINQPRVEVGGDDFRTFYTLVMVDPDAPSPGNPNQREYLHWLVTNIPGTTGANFGEEVVSYESPRPMMGIHRIIFILFRQSGRQTIYAPGWRQNFNTRDFSEVYNLGLPVAATYFNCKRQNNSARDGRRT*






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