SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g296900

Feature Type:gene_model
Chromosome:Gm18
Start:57682798
stop:57684016
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g296900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G67090.1AT RBCS1A JGI N/AIEA
4.1.1.39EC ribulose-bisphosphate carboxylase JGI N/AIEA
PTHR31262PantherFam RIBULOSE BISPHOSPHATE CARBOXYLASE SMALL CHAIN 1, CHLOROPLASTIC JGI N/AIEA
PF00101Pfam Ribulose bisphosphate carboxylase, small chain JGI N/AIEA
PF12338Pfam Ribulose-1,5-bisphosphate carboxylase small subunit JGI N/AIEA

Gene model name correspondences to Glyma.18g296900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g53430 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g296900
>Glyma.18g296900.1 sequence-type=CDS polypeptide=Glyma.18g296900.1.p locus=Glyma.18g296900 id=Glyma.18g296900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTTCCTCTATGATGTCCTCCCCAGCTGTCACCACCGTTAACCGTAGCAGCATGGTGGCTCCATTCACTGGCCTCAAGTCTATGGCTGGCTTCCCAGTTACAAAAACTAACTATGACATTAATTCTATCGCAAGCAACAGTGAAAGAGTACAATGCATGCAGCAAGGTTTTGTGTACCGTGAGAATCACCGATCACCTGAATACAATGATGGAAGGTACTGGACAATGTGGAAGCTACCAATGATTGGGTGCACAGACTCAGCTCAGGTGTTGAAGGGGGTTGATGAGGCCGTTAAGGCCTACCCTACTGCCTTCGTTCGTATCATTGGATTCGACAATGTTCGTCAAGTCCAATGCGTCATTTTCATTGCCTACAAGTCCAATGCATCATTTTCATTGCCTACAAGTCCCCTGGCTACTAAACTTGAATTTTACAAGAGCCATTTGTAG
Predicted protein sequences of Glyma.18g296900
>Glyma.18g296900.1.p sequence-type=predicted peptide transcript=Glyma.18g296900.1 locus=Glyma.18g296900 id=Glyma.18g296900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MASSMMSSPAVTTVNRSSMVAPFTGLKSMAGFPVTKTNYDINSIASNSERVQCMQQGFVYRENHRSPEYNDGRYWTMWKLPMIGCTDSAQVLKGVDEAVKAYPTAFVRIIGFDNVRQVQCVIFIAYKSNASFSLPTSPLATKLEFYKSHL*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo