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Report for Sequence Feature Glyma.18g285800

Feature Type:gene_model
Chromosome:Gm18
Start:56611460
stop:56612978
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g285800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G59960.1AT NAD(P)-linked oxidoreductase superfamily protein JGI N/AIEA
GO:0055114GO-bp oxidation-reduction process EnsemblGenomesN/AIEA
GO:0016491GO-mf oxidoreductase activity EnsemblGenomesN/AIEA
KOG1577 KOG Aldo/keto reductase family proteins JGI N/AIEA
PTHR11732Panther ALDO/KETO REDUCTASE JGI N/AIEA
PTHR11732:SF34Panther ALDO-KETO REDUCTASE JGI N/AIEA
PF00248PFAM Aldo/keto reductase family JGI N/AIEA
PWY1F-FLAVSYNSoyCyc9 flavonoid biosynthesis Plant Metabolic Network ISS
GN7V-52826SoyCyc9-rxn 6'-deoxychalcone synthase Plant Metabolic Network ISS

Proteins Associated with Glyma.18g285800
LocusGene SymbolProtein Name
CHR5 chalcone reductase CHR5

Expression Patterns of Glyma.18g285800
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g285800 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g52250 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.18g285800
>Glyma.18g285800.2 sequence-type=transcript locus=Glyma.18g285800 ID=Glyma.18g285800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACATCACCATCACCAACAAGTTAATAGCATTCCGCAAAATGGCTGCCACCACCTTAGTCTCTGAAGTCACTCTCCCCTCCTCCTCCGGCCAGCGGAAGATGCCGCTGATGGGCCTCGGCACCGCGCCGGAAGCAACCAGCGCGGTTACCACAAAAGATGCTGTTCTTGAGGCCATCAAGCAGGGCTACAGGCACTTTGATGCTGCTTCTGCTTATGGTGTGGAACAGTCTGTGGGAGAAGCCATAGCTGAAGCACTTAAGCAAGGACTAATTGCATCCAGAGATCAACTCTTCATCACTACCAAATTGTGGGTCACTGATAACCATGCCCATACTATTCTTCCTGCCCTGCAGAAATCTCTCAGGACACTTCAACTAGAATACATAGATCTCTTTCTGATCCACTGGCCCATTGCTACTAAGCCTGGAAAAGTTGTGTACCCCATTGAAGTATCAGAGATAGTGGAATTTGACATGAAGGGTGTGTGGGGATCCATGGAGGAGTGCCAGAGACTTGGCCTCACCAAAGCCATTGGAGTCAGCAACTTCTCCATCAAGAAGCTTGAAAAATTGCTCTCTTTTGCTACCATCCCTCCCGCAGTGaatcaaGTAGAAGTTAACCTTGGGTGGCAACAACAGAAGCTTAGAGATTTCTGCAAGGAAAAGGGTATTACTGTAACTGCCTTCTCACCCCTGAGGAAGGGTGCTAGTAGGGGTGCTAATTTTGTGCTGGACAATGATGTAATCAAAGAATTGGCAGATGCTCATGGCAAGACTGCAGCCCAGGTATATACTATATACTAATTAATTTCTGATTATTTTTATTTATATATTTGAAGTACTGTGTTTTCATGTTCAGAAAATTAATCAATTTTTTTTGCAGATTTGTCTTCGATGGCTATATGAACAAGGGTTGACTTTTGTTGTTAAGAGCTATGACAAAGAGAGGATGAAGCAAAACTTGGGGATTTTTGATTGGTCACTGACTGAGGATGATTACAAGAAAATAAGTGAAATCCACCAAGAGAGGCTCATCAAAGGACCAACCAAGCCTCTTCTTGATGATCTATGGGATGAAGAATGAGCAGTCACCTAAATTTCATAGTTTGAGTGTTTTCTGGTTACTCTTGAGAGAATAAAGCAAAGTGTCACCATTCTGTTGGTGCCAGATATTGCTCGAGAATTTTAATTAAATAACCCTTGCGAATGTTGATTATAGTGACACTACGCTATTTTCCATGTGATGTGGACGCAATCCAAATTCCAATTTAATTTCACTGAATCTTCTTACTTTTCTTACATTATACAATCAAGTAATTAAA
Coding sequences of Glyma.18g285800
>Glyma.18g285800.1 sequence-type=CDS polypeptide=Glyma.18g285800.1.p locus=Glyma.18g285800 ID=Glyma.18g285800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGCCACCACCTTAGTCTCTGAAGTCACTCTCCCCTCCTCCTCCGGCCAGCGGAAGATGCCGCTGATGGGCCTCGGCACCGCGCCGGAAGCAACCAGCGCGGTTACCACAAAAGATGCTGTTCTTGAGGCCATCAAGCAGGGCTACAGGCACTTTGATGCTGCTTCTGCTTATGGTGTGGAACAGTCTGTGGGAGAAGCCATAGCTGAAGCACTTAAGCAAGGACTAATTGCATCCAGAGATCAACTCTTCATCACTACCAAATTGTGGGTCACTGATAACCATGCCCATACTATTCTTCCTGCCCTGCAGAAATCTCTCAGGACACTTCAACTAGAATACATAGATCTCTTTCTGATCCACTGGCCCATTGCTACTAAGCCTGGAAAAGTTGTGTACCCCATTGAAGTATCAGAGATAGTGGAATTTGACATGAAGGGTGTGTGGGGATCCATGGAGGAGTGCCAGAGACTTGGCCTCACCAAAGCCATTGGAGTCAGCAACTTCTCCATCAAGAAGCTTGAAAAATTGCTCTCTTTTGCTACCATCCCTCCCGCAGTGAATCAAGTAGAAGTTAACCTTGGGTGGCAACAACAGAAGCTTAGAGATTTCTGCAAGGAAAAGGGTATTACTGTAACTGCCTTCTCACCCCTGAGGAAGGGTGCTAGTAGGGGTGCTAATTTTGTGCTGGACAATGATGTAATCAAAGAATTGGCAGATGCTCATGGCAAGACTGCAGCCCAGATTTGTCTTCGATGGCTATATGAACAAGGGTTGACTTTTGTTGTTAAGAGCTATGACAAAGAGAGGATGAAGCAAAACTTGGGGATTTTTGATTGGTCACTGACTGAGGATGATTACAAGAAAATAAGTGAAATCCACCAAGAGAGGCTCATCAAAGGACCAACCAAGCCTCTTCTTGATGATCTATGGGATGAAGAATGA

>Glyma.18g285800.2 sequence-type=CDS polypeptide=Glyma.18g285800.2.p locus=Glyma.18g285800 ID=Glyma.18g285800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGCCACCACCTTAGTCTCTGAAGTCACTCTCCCCTCCTCCTCCGGCCAGCGGAAGATGCCGCTGATGGGCCTCGGCACCGCGCCGGAAGCAACCAGCGCGGTTACCACAAAAGATGCTGTTCTTGAGGCCATCAAGCAGGGCTACAGGCACTTTGATGCTGCTTCTGCTTATGGTGTGGAACAGTCTGTGGGAGAAGCCATAGCTGAAGCACTTAAGCAAGGACTAATTGCATCCAGAGATCAACTCTTCATCACTACCAAATTGTGGGTCACTGATAACCATGCCCATACTATTCTTCCTGCCCTGCAGAAATCTCTCAGGACACTTCAACTAGAATACATAGATCTCTTTCTGATCCACTGGCCCATTGCTACTAAGCCTGGAAAAGTTGTGTACCCCATTGAAGTATCAGAGATAGTGGAATTTGACATGAAGGGTGTGTGGGGATCCATGGAGGAGTGCCAGAGACTTGGCCTCACCAAAGCCATTGGAGTCAGCAACTTCTCCATCAAGAAGCTTGAAAAATTGCTCTCTTTTGCTACCATCCCTCCCGCAGTGAATCAAGTAGAAGTTAACCTTGGGTGGCAACAACAGAAGCTTAGAGATTTCTGCAAGGAAAAGGGTATTACTGTAACTGCCTTCTCACCCCTGAGGAAGGGTGCTAGTAGGGGTGCTAATTTTGTGCTGGACAATGATGTAATCAAAGAATTGGCAGATGCTCATGGCAAGACTGCAGCCCAGGTATATACTATATACTAA
Predicted protein sequences of Glyma.18g285800
>Glyma.18g285800.1.p sequence-type=predicted peptide transcript=Glyma.18g285800.1 locus=Glyma.18g285800 ID=Glyma.18g285800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAATTLVSEVTLPSSSGQRKMPLMGLGTAPEATSAVTTKDAVLEAIKQGYRHFDAASAYGVEQSVGEAIAEALKQGLIASRDQLFITTKLWVTDNHAHTILPALQKSLRTLQLEYIDLFLIHWPIATKPGKVVYPIEVSEIVEFDMKGVWGSMEECQRLGLTKAIGVSNFSIKKLEKLLSFATIPPAVNQVEVNLGWQQQKLRDFCKEKGITVTAFSPLRKGASRGANFVLDNDVIKELADAHGKTAAQICLRWLYEQGLTFVVKSYDKERMKQNLGIFDWSLTEDDYKKISEIHQERLIKGPTKPLLDDLWDEE*

>Glyma.18g285800.2.p sequence-type=predicted peptide transcript=Glyma.18g285800.2 locus=Glyma.18g285800 ID=Glyma.18g285800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAATTLVSEVTLPSSSGQRKMPLMGLGTAPEATSAVTTKDAVLEAIKQGYRHFDAASAYGVEQSVGEAIAEALKQGLIASRDQLFITTKLWVTDNHAHTILPALQKSLRTLQLEYIDLFLIHWPIATKPGKVVYPIEVSEIVEFDMKGVWGSMEECQRLGLTKAIGVSNFSIKKLEKLLSFATIPPAVNQVEVNLGWQQQKLRDFCKEKGITVTAFSPLRKGASRGANFVLDNDVIKELADAHGKTAAQVYTIY*






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