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Report for Sequence Feature Glyma.18g285000

Feature Type:gene_model
Chromosome:Gm18
Start:56559932
stop:56563740
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g285000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G35450.1AT catalytics;hydrolases JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0005829GO-cc cytosol EnsemblGenomesN/AIEA
GO:0003824GO-mf catalytic activity JGI N/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
GO:0016831GO-mf carboxy-lyase activity EnsemblGenomesN/AIEA
PF04909PFAM Amidohydrolase JGI N/AIEA
GN7V-66527SoyCyc9-rxn Enzyme name not determined Plant Metabolic Network ISS

Expression Patterns of Glyma.18g285000
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g285000 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g52160 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.18g285000
>Glyma.18g285000.2 sequence-type=transcript locus=Glyma.18g285000 ID=Glyma.18g285000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTACTTTTCTTTTACTACACTGCCATGGCCGCTGCCAGCCTGGTGTCCCTTTGGGTCCTCTTCTCCGGCGTTGCTTTGTTTCCTGGAAGTTGCTCGCCGCAGCATCATAACATTCTTAAACTTAAAATGATCTCCCCCTTCACTCATAACCTTTCAACCTCCAAAATCATTGACTCCCATCTCCATATCTGGGCTTCTCCTCAAGAGGCTTCGGAATTCCCTTATGCTCCCGGACAAGAGCCCCCTGTACCAGGAAATCTTCATTTTTTGCTCCAGAATATGGAGGAGGCAGGAGTAGATGGCGTTCTCATTGTGCAGCCAATATTTCATAAATTTGATCATAGTTATGTCACAAGTGCTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAACTGATGATGGAAGTGGACTGAAGCAGTTTGAAGATCTTGTCTTAAAGGATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATGTACCAGTGGGATTCTTGTGCATGAAGGGGATTGGTCTATATATGTCTGAGATTGAGCAGTTGTGCACAGAATTTCCATCAACAGTTGTATTGATTGATCACTTGGGCTTCATCAAACCACCATTGAATGAAGAAGAAGGTCTTGTCTTTTCTCAGCTTTTGAATCTATCTAGATTCCCAAAAGTATATGTGAAATTTAGTTCTCTTTTTCAAGTGTCAAGAGAGAAGTTTCCTTATCTGGATTTGGCTCCTCTTTTGTCCCAAGTTGTCGCTAGCTTTGGTGCTAACCGTGTTATGTGGGGCAGGTAACTTCCTATCATATATGTTTTCAAATAAAATGGGAAAAGAGGGTGAGACAACTTTATTTATAACAATCATATTAACTTCCTTGAATCATGCTGTGGAAGTGATTTTCCATATGCTGCTGCTGAATGTGGCTACAAAGCAGCCAAAGAAGCAGTGCTTCTTATTGCCAACCAGATCTCTTTGCCTCCGTCTGATTTAGAGTGGATCATGGGGAGAACTGTTGCACAACTCTTCCCAAACCAATGGACTGATGCTAAGCAAGGTTTTCATAGAGAGCGGGAGTGATGTCTCTCAGATTGAGTCTTATAAAGCACTTTCACATGTTGTATTCTTAAATTATATGTTGAATGTAACATGTAAAATTGTCTCTGCACTGATGACATTTGTTCTTGTCTTTGGTAAATTCGTACACCAATATTTTTGTTGGTTGCCCTGCTGTTCTAGGTGAATAACCAGCATTGAATAAGCATTTGACTTTGTTACATTCTTCTACATATAATTTGTCGAAGTAGTTGGAGTGTAGAAGGAATGGAAATTATAAAAGCATCAAATTGTATCA

>Glyma.18g285000.3 sequence-type=transcript locus=Glyma.18g285000 ID=Glyma.18g285000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTACTTTTCTTTTACTACACTGCCATGGCCGCTGCCAGCCTGGTGTCCCTTTGGGTCCTCTTCTCCGGCGTTGCTTTGTTTCCTGGAAGTTGCTCGCCGCAGCATCATAACATTCTTAAACTTAAAATGATCTCCCCCTTCACTCATAACCTTTCAACCTCCAAAATCATTGACTCCCATCTCCATATCTGGGCTTCTCCTCAAGAGGCTTCGGAATTCCCTTATGCTCCCGGACAAGAGCCCCCTGTACCAGGAAATCTTCATTTTTTGCTCCAGAATATGGAGGAGGCAGGAGTAGATGGCGTTCTCATTGTGCAGCCAATATTTCATAAATTTGATCATAGTTATGTCACAAGTGCTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAACTGATGATGGAAGTGGACTGAAGCAGTTTGAAGATCTTGTCTTAAAGGATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATGTACCAGTGGGATTCTTGTGCATGAAGGGGATTGGTCTATATATGTCTGAGATTGAGCAGTTGTGCACAGAATTTCCATCAACAGTTGTATTGATTGATCACTTGGGCTTCATCAAACCACCATTGTAAGCTATATTATATCATTGTTTCAAAGG
Coding sequences of Glyma.18g285000
>Glyma.18g285000.1 sequence-type=CDS polypeptide=Glyma.18g285000.1.p locus=Glyma.18g285000 ID=Glyma.18g285000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGCTGCCAGCCTGGTGTCCCTTTGGGTCCTCTTCTCCGGCGTTGCTTTGTTTCCTGGAAGTTGCTCGCCGCAGCATCATAACATTCTTAAACTTAAAATGATCTCCCCCTTCACTCATAACCTTTCAACCTCCAAAATCATTGACTCCCATCTCCATATCTGGGCTTCTCCTCAAGAGGCTTCGGAATTCCCTTATGCTCCCGGACAAGAGCCCCCTGTACCAGGAAATCTTCATTTTTTGCTCCAGAATATGGAGGAGGCAGGAGTAGATGGCGTTCTCATTGTGCAGCCAATATTTCATAAATTTGATCATAGTTATGTCACAAGTGCTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAACTGATGATGGAAGTGGACTGAAGCAGTTTGAAGATCTTGTCTTAAAGGATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATGTACCAGTGGGATTCTTGTGCATGAAGGGGATTGGTCTATATATGTCTGAGATTGAGCAGTTGTGCACAGAATTTCCATCAACAGTTGTATTGATTGATCACTTGGGCTTCATCAAACCACCATTGAATGAAGAAGAAGGTCTTGTCTTTTCTCAGCTTTTGAATCTATCTAGATTCCCAAAAGTATATGTGAAATTTAGTTCTCTTTTTCAAGTGTCAAGAGAGAAGTTTCCTTATCTGGATTTGGCTCCTCTTTTGTCCCAAGTTGTCGCTAGCTTTGGTGCTAACCGTGTTATGTGGGGCAGTGATTTTCCATATGCTGCTGCTGAATGTGGCTACAAAGCAGCCAAAGAAGCAGTGCTTCTTATTGCCAACCAGATCTCTTTGCCTCCGTCTGATTTAGAGTGGATCATGGGGAGAACTGTTGCACAACTCTTCCCAAACCAATGGACTGATGCTAAGCAAGGTTTTCATAGAGAGCGGGAGTGA

>Glyma.18g285000.2 sequence-type=CDS polypeptide=Glyma.18g285000.2.p locus=Glyma.18g285000 ID=Glyma.18g285000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGCTGCCAGCCTGGTGTCCCTTTGGGTCCTCTTCTCCGGCGTTGCTTTGTTTCCTGGAAGTTGCTCGCCGCAGCATCATAACATTCTTAAACTTAAAATGATCTCCCCCTTCACTCATAACCTTTCAACCTCCAAAATCATTGACTCCCATCTCCATATCTGGGCTTCTCCTCAAGAGGCTTCGGAATTCCCTTATGCTCCCGGACAAGAGCCCCCTGTACCAGGAAATCTTCATTTTTTGCTCCAGAATATGGAGGAGGCAGGAGTAGATGGCGTTCTCATTGTGCAGCCAATATTTCATAAATTTGATCATAGTTATGTCACAAGTGCTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAACTGATGATGGAAGTGGACTGAAGCAGTTTGAAGATCTTGTCTTAAAGGATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATGTACCAGTGGGATTCTTGTGCATGAAGGGGATTGGTCTATATATGTCTGAGATTGAGCAGTTGTGCACAGAATTTCCATCAACAGTTGTATTGATTGATCACTTGGGCTTCATCAAACCACCATTGAATGAAGAAGAAGGTCTTGTCTTTTCTCAGCTTTTGAATCTATCTAGATTCCCAAAAGTATATGTGAAATTTAGTTCTCTTTTTCAAGTGTCAAGAGAGAAGTTTCCTTATCTGGATTTGGCTCCTCTTTTGTCCCAAGTTGTCGCTAGCTTTGGTGCTAACCGTGTTATGTGGGGCAGGTAA

>Glyma.18g285000.3 sequence-type=CDS polypeptide=Glyma.18g285000.3.p locus=Glyma.18g285000 ID=Glyma.18g285000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCCGCTGCCAGCCTGGTGTCCCTTTGGGTCCTCTTCTCCGGCGTTGCTTTGTTTCCTGGAAGTTGCTCGCCGCAGCATCATAACATTCTTAAACTTAAAATGATCTCCCCCTTCACTCATAACCTTTCAACCTCCAAAATCATTGACTCCCATCTCCATATCTGGGCTTCTCCTCAAGAGGCTTCGGAATTCCCTTATGCTCCCGGACAAGAGCCCCCTGTACCAGGAAATCTTCATTTTTTGCTCCAGAATATGGAGGAGGCAGGAGTAGATGGCGTTCTCATTGTGCAGCCAATATTTCATAAATTTGATCATAGTTATGTCACAAGTGCTTTGAAGAAATACCCGACCAAATTTGTTGGTTGTTGCCTTGCTAATCCAACTGATGATGGAAGTGGACTGAAGCAGTTTGAAGATCTTGTCTTAAAGGATGGTTATCGTGCTGTTCGATTCAACCCAGAATTGTGGCCAGCTGGGGAAAAGATGACAAATAAAGTTGGGAAGGCAATTTTCCAAAGGGCTGGAGAACTGAATGTACCAGTGGGATTCTTGTGCATGAAGGGGATTGGTCTATATATGTCTGAGATTGAGCAGTTGTGCACAGAATTTCCATCAACAGTTGTATTGATTGATCACTTGGGCTTCATCAAACCACCATTGTAA
Predicted protein sequences of Glyma.18g285000
>Glyma.18g285000.1.p sequence-type=predicted peptide transcript=Glyma.18g285000.1 locus=Glyma.18g285000 ID=Glyma.18g285000.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAASLVSLWVLFSGVALFPGSCSPQHHNILKLKMISPFTHNLSTSKIIDSHLHIWASPQEASEFPYAPGQEPPVPGNLHFLLQNMEEAGVDGVLIVQPIFHKFDHSYVTSALKKYPTKFVGCCLANPTDDGSGLKQFEDLVLKDGYRAVRFNPELWPAGEKMTNKVGKAIFQRAGELNVPVGFLCMKGIGLYMSEIEQLCTEFPSTVVLIDHLGFIKPPLNEEEGLVFSQLLNLSRFPKVYVKFSSLFQVSREKFPYLDLAPLLSQVVASFGANRVMWGSDFPYAAAECGYKAAKEAVLLIANQISLPPSDLEWIMGRTVAQLFPNQWTDAKQGFHRERE*

>Glyma.18g285000.2.p sequence-type=predicted peptide transcript=Glyma.18g285000.2 locus=Glyma.18g285000 ID=Glyma.18g285000.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAASLVSLWVLFSGVALFPGSCSPQHHNILKLKMISPFTHNLSTSKIIDSHLHIWASPQEASEFPYAPGQEPPVPGNLHFLLQNMEEAGVDGVLIVQPIFHKFDHSYVTSALKKYPTKFVGCCLANPTDDGSGLKQFEDLVLKDGYRAVRFNPELWPAGEKMTNKVGKAIFQRAGELNVPVGFLCMKGIGLYMSEIEQLCTEFPSTVVLIDHLGFIKPPLNEEEGLVFSQLLNLSRFPKVYVKFSSLFQVSREKFPYLDLAPLLSQVVASFGANRVMWGR*

>Glyma.18g285000.3.p sequence-type=predicted peptide transcript=Glyma.18g285000.3 locus=Glyma.18g285000 ID=Glyma.18g285000.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAAASLVSLWVLFSGVALFPGSCSPQHHNILKLKMISPFTHNLSTSKIIDSHLHIWASPQEASEFPYAPGQEPPVPGNLHFLLQNMEEAGVDGVLIVQPIFHKFDHSYVTSALKKYPTKFVGCCLANPTDDGSGLKQFEDLVLKDGYRAVRFNPELWPAGEKMTNKVGKAIFQRAGELNVPVGFLCMKGIGLYMSEIEQLCTEFPSTVVLIDHLGFIKPPL*






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