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Report for Sequence Feature Glyma.18g279200

Feature Type:gene_model
Chromosome:Gm18
Start:56301958
stop:56305089
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g279200
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G23710.1AT JGI N/AIEA
GO:0006351GO-bp transcription, DNA-templated JGI N/AIEA
GO:0003677GO-mf DNA binding JGI N/AIEA
GO:0003899GO-mf DNA-directed 5'-3' RNA polymerase activity JGI N/AIEA
K03025KEGG Transcription machinery JGI N/AIEA
KOG3233 KOG RNA polymerase III, subunit C34 JGI N/AIEA
PTHR12780PantherFam RNA POLYMERASE III DNA DIRECTED , 39KD SUBUNIT-RELATED JGI N/AIEA
PTHR12780:SF1PantherFam DNA-DIRECTED RNA POLYMERASE III SUBUNIT RPC6 JGI N/AIEA
PF05158Pfam RNA polymerase Rpc34 subunit JGI N/AIEA

Gene model name correspondences to Glyma.18g279200 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g51420 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g279200
>Glyma.18g279200.1 sequence-type=CDS polypeptide=Glyma.18g279200.1.p locus=Glyma.18g279200 id=Glyma.18g279200.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGCAGAGAAGTGACCTCGCTCGTCAAAGCAGTTGCAAGAGCCCCAGGGGGAAGCCCCACTTTGCTGAATTCCTCAATTTTTCAGGAATGAGTCATTTGCAAGGATCTTCTTCACTTAAACGGAAACGACAAGACCTGGCTTTAGTGACGGGGTCTTTGACAGATGGTGAAAGGGTATTGTATAATCTCATCCATAGCAAGAAAGACATGGGAATCTGGACAGGAGACATGAAACGAGAAACAAACCTGCCTGACAGCATAGTAAAAAAGTCCCTGAAGTTGCTTCAATCCAAGAATCTGATAAAGGAGGTTGTTAACATTCAAAACAAAGGGAGAAAGCACTACATGGCAGCAGAGTTTGAACCTTCTAAGGAAATCACTGGTGGGGTTTGGTATAATCAAGGGAGACTTGATACAGATTTCATAAACCTTGTAAAGGACGTGTGCTTGAAGTACATTTTCAGGCAGAAAGTTGCCACACGTGATGGAGTTATGGAGTGGAGCAGAAAGAGTGGTGTCTTCAATGTTGAAGTCACAACACAGCAAATTGATGAGATTTTGCGAACTTTGGTTTTGGATGATGAGATTGTAGAGGTGAAGAGCACTGGATTTGGGGATTTTTCATCTGTTCCTGTTGGAAGAATTTGTTACAGATGCAAAAGCAAAGGTGGCAATAGAGGGGAACAGAAACCTGGTGCCATGGCTTCCATTCCATGTGGAGTTTGTCCACGAATAAACTTCTGTACACCAGATGGCATTATCTCTCCAAGAACTTGTGTATATTATCAGAAATGGTTGGACTTCTGA

>Glyma.18g279200.2 sequence-type=CDS polypeptide=Glyma.18g279200.2.p locus=Glyma.18g279200 id=Glyma.18g279200.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAGTCATTTGCAAGGATCTTCTTCACTTAAACGGAAACGACAAGACCTGGCTTTAGTGACGGGGTCTTTGACAGATGGTGAAAGGGTATTGTATAATCTCATCCATAGCAAGAAAGACATGGGAATCTGGACAGGAGACATGAAACGAGAAACAAACCTGCCTGACAGCATAGTAAAAAAGTCCCTGAAGTTGCTTCAATCCAAGAATCTGATAAAGGAGGTTGTTAACATTCAAAACAAAGGGAGAAAGCACTACATGGCAGCAGAGTTTGAACCTTCTAAGGAAATCACTGGTGGGGTTTGGTATAATCAAGGGAGACTTGATACAGATTTCATAAACCTTGTAAAGGACGTGTGCTTGAAGTACATTTTCAGGCAGAAAGTTGCCACACGTGATGGAGTTATGGAGTGGAGCAGAAAGAGTGGTGTCTTCAATGTTGAAGTCACAACACAGCAAATTGATGAGATTTTGCGAACTTTGGTTTTGGATGATGAGATTGTAGAGGTGAAGAGCACTGGATTTGGGGATTTTTCATCTGTTCCTGTTGGAAGAATTTGTTACAGATGCAAAAGCAAAGGTGGCAATAGAGGGGAACAGAAACCTGGTGCCATGGCTTCCATTCCATGTGGAGTTTGTCCACGAATAAACTTCTGTACACCAGATGGCATTATCTCTCCAAGAACTTGTGTATATTATCAGAAATGGTTGGACTTCTGA
Predicted protein sequences of Glyma.18g279200
>Glyma.18g279200.1.p sequence-type=predicted peptide transcript=Glyma.18g279200.1 locus=Glyma.18g279200 id=Glyma.18g279200.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MQRSDLARQSSCKSPRGKPHFAEFLNFSGMSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF*

>Glyma.18g279200.2.p sequence-type=predicted peptide transcript=Glyma.18g279200.2 locus=Glyma.18g279200 id=Glyma.18g279200.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSHLQGSSSLKRKRQDLALVTGSLTDGERVLYNLIHSKKDMGIWTGDMKRETNLPDSIVKKSLKLLQSKNLIKEVVNIQNKGRKHYMAAEFEPSKEITGGVWYNQGRLDTDFINLVKDVCLKYIFRQKVATRDGVMEWSRKSGVFNVEVTTQQIDEILRTLVLDDEIVEVKSTGFGDFSSVPVGRICYRCKSKGGNRGEQKPGAMASIPCGVCPRINFCTPDGIISPRTCVYYQKWLDF*






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