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Report for Sequence Feature Glyma.18g271900

Feature Type:gene_model
Chromosome:Gm18
Start:55768255
stop:55772293
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g271900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G60920.1AT COB JGI N/AIEA
GO:0010215GO-bp cellulose microfibril organization JGI N/AIEA
GO:0016049GO-bp cell growth JGI N/AIEA
GO:0031225GO-cc anchored component of membrane JGI N/AIEA
PTHR31673PantherFam PROTEIN COBRA JGI N/AIEA
PTHR31673:SF3PantherFam PROTEIN COBRA JGI N/AIEA
PF04833Pfam COBRA-like protein JGI N/AIEA

Proteins Associated with Glyma.18g271900
LocusGene SymbolProtein Name
COBL20 Regulates cell wall expansion and cellulose depostion

Gene model name correspondences to Glyma.18g271900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g50750 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g271900
>Glyma.18g271900.1 sequence-type=CDS polypeptide=Glyma.18g271900.1.p locus=Glyma.18g271900 id=Glyma.18g271900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGCTTCTCTCAGTTACCCAAAGCAACTCCTAGCATTTTGTTCTTGGTTCTGCTGTCTTGTACTTGCTTCACTTCAACAGATGCTTATGATCCGCTTGACCCAAATGGGAATATAACAATCAAATGGGATGTTATATCCTGGACCCCTGATGGATATGTAGCTGTTGTTACAATGAACAACTTCCTAGCATTTCGTCACATCCCTTCACCTGGCTGGTCAATGAGATGGACATGGGCCAAAAAGGAGGTAATATGGAACATGGTGGGAGGGCAGGCCACAGAACAAGGGGATTGCTCAAAATTTAAGGGAAATATTCCACATTCCTGTAAGAAAAATCCCACAGTTGTAGATTTGCTTCCTGGAACACCTTACAATCAACAAGTTGCAAATTGCTGCAAAGGTGGAGTGCTCACTACATTGGTGCAGGATCCAACCAAAGCAGCTGCATCATTTCAAGTCAGTGTTGGTAGAGCTGGAACCACAAACAGAACTGTCAAACTCCCAAAAAACTTCACCTTGAAAGCACCGGGACCAGGTTATACTTGTGGGCCAGCTAAGATTGTGAGACCCACTAAATTCATTACTCCAGACAAAAGGAGAGTGACCGTAGCACTGATGACATGGAAAGTGGTATGCACATACTCACAATTTCTGGTTCGTAAAACTCCAACTTGCTGTGTCACACTTTCATCTTTCCATAATAATACTGTTGTGCCCTGCCCAACATGTTCATGTGGCTGCCAAAGGAACTCATCTCGGTCAAGGAGATGTGTAAATCCAGGTACACCACATTTGGCCTCTAACGTTACTAGCTCTGGGACGAATAATTTGTCACCTTTGGTTCAATGTACTAAGCATATGTGCCCAACCCAAGTTCACTGGCACGTTATGCGAAACTCCAAGAAATACTGGCGTGTGAAGGTTACTGTTACTAATTTTAGTTACAGGATGAATTATTCTGACTGGAACTTGCTTGTTCAACACCATAACTTCAACAATCGGACTCAAGTGTTTGGTTTCAACTACAAGTTACTGGCTTTGGATGCATATACAAATGATATAGCAATGCTGTGGGGAATTAAGTCCCGTCATAATGACATTCTCAACCAAGCTGGCCCTAAAGGCAATGTTCAAGCAGAGCTACTCTTCAGAAAGGATAAAGCAACTTTTACTTTTGATAAGGGTTGGGCTTTTCCTCGAAGGATCTACTTCAATGGTGACATATGTGTGATGCCACCACCTGATGCTTATCCATTTTAG
Predicted protein sequences of Glyma.18g271900
>Glyma.18g271900.1.p sequence-type=predicted peptide transcript=Glyma.18g271900.1 locus=Glyma.18g271900 id=Glyma.18g271900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGFSQLPKATPSILFLVLLSCTCFTSTDAYDPLDPNGNITIKWDVISWTPDGYVAVVTMNNFLAFRHIPSPGWSMRWTWAKKEVIWNMVGGQATEQGDCSKFKGNIPHSCKKNPTVVDLLPGTPYNQQVANCCKGGVLTTLVQDPTKAAASFQVSVGRAGTTNRTVKLPKNFTLKAPGPGYTCGPAKIVRPTKFITPDKRRVTVALMTWKVVCTYSQFLVRKTPTCCVTLSSFHNNTVVPCPTCSCGCQRNSSRSRRCVNPGTPHLASNVTSSGTNNLSPLVQCTKHMCPTQVHWHVMRNSKKYWRVKVTVTNFSYRMNYSDWNLLVQHHNFNNRTQVFGFNYKLLALDAYTNDIAMLWGIKSRHNDILNQAGPKGNVQAELLFRKDKATFTFDKGWAFPRRIYFNGDICVMPPPDAYPF*






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