SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g261600

Feature Type:gene_model
Chromosome:Gm18
Start:55032126
stop:55037260
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g261600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G01120.1AT ATCYS1,CGS,CGS1,MTO1 JGI N/AIEA
2.5.1.48EC cystathionine gamma-synthase JGI N/AIEA
GO:0030170GO-mf pyridoxal phosphate binding JGI N/AIEA
K01739KEGG Selenocompound metabolism JGI N/AIEA
KOG0053 KOG Cystathionine beta-lyases/cystathionine gamma-synthases JGI N/AIEA
PTHR11808PantherFam TRANS-SULFURATION ENZYME FAMILY MEMBER JGI N/AIEA
PF01053Pfam Cys/Met metabolism PLP-dependent enzyme JGI N/AIEA

Proteins Associated with Glyma.18g261600
LocusGene SymbolProtein Name
CGS1 cystathionine gamma-synthase 1, chloroplastic

Gene model name correspondences to Glyma.18g261600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g49660 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g261600
>Glyma.18g261600.1 sequence-type=CDS polypeptide=Glyma.18g261600.1.p locus=Glyma.18g261600 id=Glyma.18g261600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGTTTCGAGCTCGCACATGCGTTTCACCTTCGAGTGCCGCTCCGATCCCGATTTCTCGCCACCGCCGCCGTCCTTCGACAACCTCCGCCGCCGTAACTTCCGCTCCTCCGCCGGATCCGGCGCGGCGTTTCACGGCATCTCCTCCCTCATCCTCCGATTCCCTCCCAACTTCCAGCGCCAGCTCAGCACCAAGGCGCGCCGCAATTGTAGCAACATCGGCGTCGCGCAAATTGTCGCCGCTTCGTGGTCGAACAACAGCGACAACTCTCCGGCCGCCGGGGCTCCGGCGCCGCCCGCGGCCACAGCAGCGGACGCCGCCACGGTGCCTCTCCCCGTCGACCTCGCCGCCGCCGAGGACGTCGTCGTCTCTGCCGCGGCCGCCGAGAACGGGACTGTACAGTTAAACAGTAGTTCTTATTCATTTTTGAAATCCGATGCAAGCAAAACGATTCATGCCGCTGAAAGACTGGGTAGGGGTATTGAGACTGATGGAATTACCACCCCTGTGCTGAACACTTCTGCCTACTTTTTTAAGAAAACCGCTGATCTCATTGATTTCAAGGAGAATCGTCAAGTGAGTTATGAATACGGGCGCTATGGAAACCCAACGACTGTGGTTCTGGAGGAGAAGATAAGTATATTGGAGGGGGCTGAATCAACTGTGATAATGGCATCTGGAATGTGTGCTAGCGTAGTCCTATTTATGGCACTGGTTCCAGCTGGTGGACATCTTGTGACCACTACGGATTGTTACAGGAAGACTAGAATATTCATTGAGACTTTTCTTCCAAAGATGGGGATCACGACCACTGTAATTGATCCAGCAGATGTTGGAGCCTTGGAATCTGCATTGGAGCAGCACAATGTGTCTCTATTCTTCACTGAGTCGCCTACCAATCCATTCCTGAGATGTGTTGACATTAAGCTGGTTTCAGAGCTTTGCCACAAGAAGGGGACTTTGCTCTGTATTGATGGTACATTTGCAACACCATTGAACCAGAAGGCCCTTGCCCTTGGCGCTGATCTGATTCTGCACTCCTTAACAAAATACATGGGTGGACATCATGATGCCCTTGGTGGTTGCATAAGTGGTTCAACTAAGGTGGTTTCGCAAATTCGGACTTTGCACCATGTTTTGGGTGGTACACTTAACCCGAATGCTGCATACCTATTCATCAGAGGCATGAAAACGCTGCATCTCCGTGTACAGCAGCAGAATTCAACAGGAATGAGGATGGCCGAACTTTTAGAGGCACATCCCAAGGTGAAGCGGGTCTACTATCCAGGCTTGCCGAGTCATCCTGAACATGAGCTTGCCAAGAGGCAGATGACTGGTTTCGGTGGTGTTGTCAGTTTTGAGATTGATGGAGATCTACATACCACAATAAAGTTTATTGATTCACTGAAAATCCCTTATATTGCGGCCTCGTTTGGTGGCTGTGAGAGCATTGTGGATCAACCTGCTATTTTGTCTTACTGGGATCTTCCTCAGTCAGAAAGGGCCAAGTATAAGATTTATGACAACCTGGTTCGCTTCAGCTTTGGAGTTGAAGATTTTGAGGATTTGAAGGCTGATGTCCTGCAAGCTCTGGAAGCTATATAG
Predicted protein sequences of Glyma.18g261600
>Glyma.18g261600.1.p sequence-type=predicted peptide transcript=Glyma.18g261600.1 locus=Glyma.18g261600 id=Glyma.18g261600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAVSSSHMRFTFECRSDPDFSPPPPSFDNLRRRNFRSSAGSGAAFHGISSLILRFPPNFQRQLSTKARRNCSNIGVAQIVAASWSNNSDNSPAAGAPAPPAATAADAATVPLPVDLAAAEDVVVSAAAAENGTVQLNSSSYSFLKSDASKTIHAAERLGRGIETDGITTPVLNTSAYFFKKTADLIDFKENRQVSYEYGRYGNPTTVVLEEKISILEGAESTVIMASGMCASVVLFMALVPAGGHLVTTTDCYRKTRIFIETFLPKMGITTTVIDPADVGALESALEQHNVSLFFTESPTNPFLRCVDIKLVSELCHKKGTLLCIDGTFATPLNQKALALGADLILHSLTKYMGGHHDALGGCISGSTKVVSQIRTLHHVLGGTLNPNAAYLFIRGMKTLHLRVQQQNSTGMRMAELLEAHPKVKRVYYPGLPSHPEHELAKRQMTGFGGVVSFEIDGDLHTTIKFIDSLKIPYIAASFGGCESIVDQPAILSYWDLPQSERAKYKIYDNLVRFSFGVEDFEDLKADVLQALEAI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo