Glyma.18g251800

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Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g251800

Feature Type:	gene_model
Chromosome:	Gm18
Start:	53831521
stop:	53837121
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.18g251800

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G44830.1	AT	Protein kinase superfamily protein	JGI	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	EnsemblGenomes	N/A	IEA
GO:0006468	GO-bp	protein phosphorylation	JGI	N/A	IEA
GO:0035556	GO-bp	intracellular signal transduction	EnsemblGenomes	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0005737	GO-cc	cytoplasm	EnsemblGenomes	N/A	IEA
GO:0005886	GO-cc	plasma membrane	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	EnsemblGenomes	N/A	IEA
GO:0004672	GO-mf	protein kinase activity	JGI	N/A	IEA
GO:0004674	GO-mf	protein serine/threonine kinase activity	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	JGI	N/A	IEA
KOG0610	KOG	Putative serine/threonine protein kinase	JGI	N/A	IEA
PTHR24351	Panther	RIBOSOMAL PROTEIN S6 KINASE	JGI	N/A	IEA
PTHR24351:SF88	Panther		JGI	N/A	IEA
PF00069	PFAM	Protein kinase domain	JGI	N/A	IEA

Expression Patterns of Glyma.18g251800

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology


Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.18g251800

Paralog	Evidence	Comments
Glyma.09g242900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.18g251800 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma18g48670	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.18g251800

Limit To All Plant Sequences

>Glyma.18g251800.2 sequence-type=transcript locus=Glyma.18g251800 ID=Glyma.18g251800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TTTGAAAAGCAGTGTAGCTCAAAGAAGGAACATGCATGGCCCCACTTTTTCTCTCTGTCCCGCTGAACAAAGTGTACAACAATCACAGTACTACTGCTATCATTCAAATACCAAAAATCAAAAAAGGAGAAAGCAAAAGCTAACCATAACTATCTATCTCTCTCCAACACCACTTTAGTTCCCCAGTCAGTCACAGCTCCTTCCCTAGACAGAGAAACTAACTCACTTCTAGTGAGAGAAACGAAAAGAAAAGCACTCCTCTTCAAGCTTTTTTGTTTTTCTGTTCTTGCTTGCTTCATCTTCCAATCTTCTCTCCCCATTGTGGTTTGGTTTCACACCTTCTATGTGAagagagagagagagagagagagagagagagagTATTGTACTATTGTGTGTGTTTTCCAGTCTGGAGGGAACACTGAAGAAGCTCTGAGTTGAGTTCTGAAAAAAGACAACTTAGTGAAGAAGAAGGGAAACCAAGGGATACCCATTTTTTCTCTTCTTCATTTCAATGCGTTTTCTTAATTAGAAGCCTTCATTTAATGATATGTGATATTGGGATATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCTAATGGACACACCGCTGCAATAAGAGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGTGTGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAATCACGGGATGGCCCTATGGCACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCGAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGTGCCTGTGCCTACAAGAACATGGAAAGGAAAGGGCTCTTTACCAGAAGCTGTAGAACTTGTGTCTGATATTGAGAAATTGAAGGGTAGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTAATGAAGAGCGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCTTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAATCATGGCTGAGGAATCAAATGAGATGGGTAACTTATCCTCACCATTTTCAGGTGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGACTCTGATGAGAAAGAATGTGTTTGGGATGCATCATTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTTACTAGTGATGGAATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCCCGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTACAGTTGCTGGATCATCCATTTCTACCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTCGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGCGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCGGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTTATGCCTCGCCTCTTTGCTCAGAAAAATAAGAAGTCACGAAAGCCTAAAGGCGATCCTGGCTTGCCATCCAGCACGCTTCCTGAGCTTGTTGCAGAACCAACAACAGCTCGGTCGATGTCTTTTGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAATGTAGTGGGCCAGCAGCTCAGATTTCCTGAATCGCCGGCCACAAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGTCTCGGGGTGAAGAGAGGCGCGACTGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCCGAAGTTCCAAGACCAGTTGAATTTGATCCACCGGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGcaacaacaacatcaacaacaacaaTAGTAGTAAGAGGATGGTGGGTAATAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAAGTTTGGATTCCTCAATCTACTTTGTATTGTATTTTCCATCTTCAGTTAATTTTACAAGAGATGAAAGCTACATTATCATGTTATATTTCAGTTTAGACACAGTTAGCAGACTTCCATTTCAGTTGGGAATGATACACGTCATATTCAGAGTGTAAGGCCCTTGTCTAATACAAGAATTCTTATAGATAATCCATGATCTAGAGTCTCAATACAAAATCTAGATATTTCTCATTAAGCTTATGTCATTTGTTGTGTTATTCCTTCAAGTGCCTATTATTGTTATTTAG

Coding sequences of Glyma.18g251800

Limit To All Plant Sequences

>Glyma.18g251800.1 sequence-type=CDS polypeptide=Glyma.18g251800.1.p locus=Glyma.18g251800 ID=Glyma.18g251800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCTAATGGACACACCGCTGCAATAAGAGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGTGTGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAATCACGGGATGGCCCTATGGCACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCGAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGTGCCTGTGCCTACAAGAACATGGAAAGGAAAGGGCTCTTTACCAGAAGCTGTAGAACTTGTGTCTGATATTGAGAAATTGAAGGGTAGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTAATGAAGAGCGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCTTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAATCATGGCTGAGGAATCAAATGAGATGGGTAACTTATCCTCACCATTTTCAGGTGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGACTCTGATGAGAAAGAATGTGTTTGGGATGCATCATTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTTACTAGTGATGGAATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCCCGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTACAGTTGCTGGATCATCCATTTCTACCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTCGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGCGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCGGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTTATGCCTCGCCTCTTTGCTCAGAAAAATAAGAAGTCACGAAAGCCTAAAGGCGATCCTGGCTTGCCATCCAGCACGCTTCCTGAGCTTGTTGCAGAACCAACAACAGCTCGGTCGATGTCTTTTGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAATGTAGTGGGCCAGCAGCTCAGATTTCCTGAATCGCCGGCCACAAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGTCTCGGGGTGAAGAGAGGCGCGACTGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCCGAAGTTCCAAGACCAGTTGAATTTGATCCACCGGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACAACAACATCAACAACAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA

>Glyma.18g251800.2 sequence-type=CDS polypeptide=Glyma.18g251800.2.p locus=Glyma.18g251800 ID=Glyma.18g251800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCTAATGGACACACCGCTGCAATAAGAGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGTGTGGGATTCCAGCAAGAGAAGGGAATCAGTTTTCAAAATCACGGGATGGCCCTATGGCACGTCTTGCCTCCATCAGAGAAGTGGCTCAGTTATCGAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGTGCCTGTGCCTACAAGAACATGGAAAGGAAAGGGCTCTTTACCAGAAGCTGTAGAACTTGTGTCTGATATTGAGAAATTGAAGGGTAGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCTGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACAGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTAATGAAGAGCGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCGTGTTCTTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAATCATGGCTGAGGAATCAAATGAGATGGGTAACTTATCCTCACCATTTTCAGGTGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGACTCTGATGAGAAAGAATGTGTTTGGGATGCATCATTGCCTCCAAGTGGCAATGTCAGTCCTCATAGTAGTATTGATAGTACTAGTGTTGTCAGAACAATGAGCATTGTTAATAGTTGTGCAAGTACATACCGGAGTGATGCAGTTACTAGTGATGGAATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAATAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAGCCCGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGGGCACAGACAGAAAGAGAGATATTACAGTTGCTGGATCATCCATTTCTACCTACTTTGTATACACATTTTGAGACTGACAGATTCTGCTGTTTGGTAATGGAATACTGTCCTGGGGGTGATCTACACACTTTAAGGCAACGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTCGTGTATCGAGACCTTAAACCTGAAAATGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGATTTCGATCTTTCTCTCAGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGCGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCGGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTTATGCCTCGCCTCTTTGCTCAGAAAAATAAGAAGTCACGAAAGCCTAAAGGCGATCCTGGCTTGCCATCCAGCACGCTTCCTGAGCTTGTTGCAGAACCAACAACAGCTCGGTCGATGTCTTTTGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCATGAGCTATTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAATGTAGTGGGCCAGCAGCTCAGATTTCCTGAATCGCCGGCCACAAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGTCTCGGGGTGAAGAGAGGCGCGACTGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCATTGATTAGGTGCAGCACACCACCCGAAGTTCCAAGACCAGTTGAATTTGATCCACCGGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACAACAACATCAACAACAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA

Predicted protein sequences of Glyma.18g251800

Limit To All Plant Sequences

>Glyma.18g251800.1.p sequence-type=predicted peptide transcript=Glyma.18g251800.1 locus=Glyma.18g251800 ID=Glyma.18g251800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERVAEPKVLPRSLPVLVEVSNGHTAAIREAGQRLNGQDVSSVCGIPAREGNQFSKSRDGPMARLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPVPVPTRTWKGKGSLPEAVELVSDIEKLKGSNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLMKSVSLKGPFLEDLSIRVLAKKPSLAVVSPAEIMAEESNEMGNLSSPFSGARASQNTENSPLAPDSDEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRKPKGDPGLPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEFDPPAKFEPVDTVGVGNNNINNNNSSKRMVGNNNDMKSGGKYLDFEFF*

>Glyma.18g251800.2.p sequence-type=predicted peptide transcript=Glyma.18g251800.2 locus=Glyma.18g251800 ID=Glyma.18g251800.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MERVAEPKVLPRSLPVLVEVSNGHTAAIREAGQRLNGQDVSSVCGIPAREGNQFSKSRDGPMARLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPVPVPTRTWKGKGSLPEAVELVSDIEKLKGSNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLMKSVSLKGPFLEDLSIRVLAKKPSLAVVSPAEIMAEESNEMGNLSSPFSGARASQNTENSPLAPDSDEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIVNSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRARDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRKPKGDPGLPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVEFDPPAKFEPVDTVGVGNNNINNNNSSKRMVGNNNDMKSGGKYLDFEFF*

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