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Report for Sequence Feature Glyma.18g250700

Feature Type:gene_model
Chromosome:Gm18
Start:53701483
stop:53705862
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g250700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G04160.1AT Subtilisin-like serine endopeptidase family protein JGI N/AIEA
GO:0006508GO-bp proteolysis EnsemblGenomesN/AIEA
GO:0006508GO-bp proteolysis JGI N/AIEA
GO:0005576GO-cc extracellular region EnsemblGenomesN/AIEA
GO:0004252GO-mf serine-type endopeptidase activity EnsemblGenomesN/AIEA
GO:0004252GO-mf serine-type endopeptidase activity JGI N/AIEA
GO:0016787GO-mf hydrolase activity EnsemblGenomesN/AIEA
PTHR10795Panther PROPROTEIN CONVERTASE SUBTILISIN/KEXIN JGI N/AIEA
PTHR10795:SF17Panther JGI N/AIEA
PF00082PFAM Subtilase family JGI N/AIEA
PF02225PFAM PA domain JGI N/AIEA

Expression Patterns of Glyma.18g250700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g250700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g48580 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g250700
>Glyma.18g250700.1 sequence-type=CDS polypeptide=Glyma.18g250700.1.p locus=Glyma.18g250700 ID=Glyma.18g250700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAAAATACATGCAACAGAAAGCTGATTGGAGCAAGATACTATAACAAAGCTTTCGAGGCACATAACGGCCAACTGGATCCATTGCTACATACAGCACGTGACTTTGTGGGGCATGGAACCCATACTCTATCAACTGCAGGGGGAAATTTTGTCCCAGGAGCGAGGGTATTTGCCGTTGGCAATGGCACTGCAAAGGGTGGGTCACCAAGAGCTAGGGTTGCAGCTTACAAAGTGTGTTGGTCTCTTACTGATCCTGCAAGTTGTTATGGGGCTGATGTGTTAGCTGCTATTGACCAAGCCATAGATGATGGTGTTGATGTCATCAATGTTTCTTTTGGTGTCAGCTACGTTGTCACTGCTGAAGGAATATTCACAGATGAGATTTCCATTGGGGCATTCCATGCAATTTCTAAAAACATACTTTTAGTTGCCTCTGCAGGAAATGATGGACCAACGCCTGGAACTGTTGCCAATGTGGCTCCTTGGGTCTTCACAATTGCTGCTAGCACATTAGACAGAGATTTCAGCAGCAATTTAACCATTAATAATCAGCTAATTGAGGGAGCCAGTCTTTTTGTAAATCTGCCACCCAATCAGGCCTTTTCTCTGATCCTCTCCACTGATGCCAAACTTGCTAATGCGACATTTCGAGATGCTCAACTTTGTAGGCGTGGAACACTTGATCGTACAAAAGTAAACGGCAAAATAGTGTTATGCACTCGTGAAGGAAAAATAAAATCAGTTGCTGAGGGTCTGGAAGCTCTAACCGCGGGCGCAAGGGGAATGATTTTGAACAATCAGATGCAAAATGGAAAAACACTTTCTGCTGAGCCTCATGTTTTTTCCACTGTGAACACGCCTCCAAGACGTGCAAAGTCAAGGCCCCATGGTGTCAAAACAACTGCCATTGGGGACGAGGATGACCCTTTAAAAACGGGTGATACAATAAAAATGTCCCGAGCAAGAACGTTATTTGGAAGAAAGCCAGCTCCAGTTATGGCATCATTTTCATCTAGAGGACCCAATAAGATTCAGCCATCAATACTCAAGCCTGATGTAACTGCGCCTGGTGTGAACATTCTTGCTGCCTATTCAGAGTTTGCAAGTGCATCTAGCTTGCTAGTAGACAATCGTCGTGGGTTTAAATTCAATGTATTGCAAGGAACTTCTATGTCTTGTCCTCATGCTTCGGGCATTGCTGGACTTCTCAAAACACGACATCCTAGTTGGAGTCCTGCTGCTATTAAATCAGCTATCATGACCACAGCAACCACACTCGACAACACTAATAGGCCAATCCAGGATGCGTTTGATAAAACACTAGCAGATGCTTTTGCTTATGGTTCTGGACATGTTCGACCCGATCTAGCGATAGAACCTGGGCTTGTTTACGATCTAAGCCTCACTGATTACTTGAACTTCTTATGTGCTTCCGGATACGACCAACAACTCATTTCCGCCCTCAATTTCAACAGGACATTCATTTGTTCAGGTTCTCACAGCGTAAATGACTTGAACTACCCTTCAATCACATTGCCAAATCTTCGCTTAAAACCCGTAACCATTGCTCGCACAGTCACAAATGTTGGGCCACCAAGCACATACACTGTAAGTACCCGCTCGCCAAATGGATATAGCATTGCCGTTGTGCCACCTTCCTTGACTTTCACGAAAATTGGTGAAAGGAAGACATTCAAAGTCATTGTGCAAGCAAGCAGTGCAGCTACGCGGAGAAAGTATGAATTCGGGGATTTGCGTTGGACAGACGGAAAGCATATAGTAAGGAGTCCTATTACAGTTAAGCGCAGATGA
Predicted protein sequences of Glyma.18g250700
>Glyma.18g250700.1.p sequence-type=predicted peptide transcript=Glyma.18g250700.1 locus=Glyma.18g250700 ID=Glyma.18g250700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKNTCNRKLIGARYYNKAFEAHNGQLDPLLHTARDFVGHGTHTLSTAGGNFVPGARVFAVGNGTAKGGSPRARVAAYKVCWSLTDPASCYGADVLAAIDQAIDDGVDVINVSFGVSYVVTAEGIFTDEISIGAFHAISKNILLVASAGNDGPTPGTVANVAPWVFTIAASTLDRDFSSNLTINNQLIEGASLFVNLPPNQAFSLILSTDAKLANATFRDAQLCRRGTLDRTKVNGKIVLCTREGKIKSVAEGLEALTAGARGMILNNQMQNGKTLSAEPHVFSTVNTPPRRAKSRPHGVKTTAIGDEDDPLKTGDTIKMSRARTLFGRKPAPVMASFSSRGPNKIQPSILKPDVTAPGVNILAAYSEFASASSLLVDNRRGFKFNVLQGTSMSCPHASGIAGLLKTRHPSWSPAAIKSAIMTTATTLDNTNRPIQDAFDKTLADAFAYGSGHVRPDLAIEPGLVYDLSLTDYLNFLCASGYDQQLISALNFNRTFICSGSHSVNDLNYPSITLPNLRLKPVTIARTVTNVGPPSTYTVSTRSPNGYSIAVVPPSLTFTKIGERKTFKVIVQASSAATRRKYEFGDLRWTDGKHIVRSPITVKRR*






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