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Report for Sequence Feature Glyma.18g248300

Feature Type:gene_model
Chromosome:Gm18
Start:53807941
stop:53815896
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g248300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G79500.4AT AtkdsA1 JGI N/AIEA
2.5.1.55EC 3-deoxy-8-phosphooctulonate synthase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0009058GO-bp biosynthetic process JGI N/AIEA
GO:0005737GO-cc cytoplasm JGI N/AIEA
GO:0008676GO-mf 3-deoxy-8-phosphooctulonate synthase activity JGI N/AIEA
K01627KEGG Lipopolysaccharide biosynthesis proteins JGI N/AIEA
PTHR21057PantherFam PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE JGI N/AIEA
PTHR21057:SF2PantherFam 2-DEHYDRO-3-DEOXYPHOSPHOOCTONATE ALDOLASE 1-RELATED JGI N/AIEA
PF00793Pfam DAHP synthetase I family JGI N/AIEA

Gene model name correspondences to Glyma.18g248300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g48370 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g248300
>Glyma.18g248300.1 sequence-type=CDS polypeptide=Glyma.18g248300.1.p locus=Glyma.18g248300 id=Glyma.18g248300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCCTCTGCGGCATTGCTATTTAACCACCTCAAGGGTGCAGACCCGTTCTTCCTGCTAGCGGGTCCTAATGTGATTGAATCGGAGGAGCACATTCTGCGGATGGCTAAGAACATCAAGAGTGTTGCATCTGAAGTTGGAATACCATTGGTTTTCAAGTCAAGCTTTGACAAAGCTAACCGAACATCATCAAAATCATTTCGTGGCCCGGGGATGGCTGAGGGATTGAAGATACTCGAGAAGGTAAAAATAGCTTATGACATTCCTATAGTGACAGATGTGCATGAGACCATCCAGTGTGAAGCAGTTGGCAGAGTTGCAGATATCATTCAGATTCCAGCATTCTTGTGTCGCCAAACAGATCTTCTAGTTGCAGCAGCCAAAACTGGGAAAATTATCAACATTAAGAAGGGCCAGTTCTGTGCTCCTTCTGTGATGACAAATTCAGCTGAAAAGGTTCGGTTAGCTGGAAATCCTAATGTGATGGTTTGTGAGAGAGGAACAATGTTTGGATACAATGATTTGATTGTTGATCCACGTAACTTGGAGTGGATGAGAGAAGCCAATTGTCCCATTGTAGCTGATATAACTCACTCACTACAACAGCCTGCTGGAAAGATGTTGGATGGGGGAGGTGTTGCTAGTGGAGGTCTTCGAGAACTAATACCTTGCATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGCCTTTGCGCCACTTTAAGGAGCTACTTGAAGAGCTTGTAGCCATTGCTAGGGTAAGCAAAGGGAAGCAACGGTTCAACATTGATCTCACACCATTTCGTGAATAA

>Glyma.18g248300.2 sequence-type=CDS polypeptide=Glyma.18g248300.2.p locus=Glyma.18g248300 id=Glyma.18g248300.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCCTCTGCGGCATTGCTATTTAACCACCTCAAGGGTGCAGACCCGTTCTTCCTGCTAGCGGGTCCTAATGTGATTGAATCGGAGGAGCACATTCTGCGGATGGCTAAGAACATCAAGAGTGTTGCATCTGAAGTTGGAATACCATTGGTTTTCAAGTCAAGCTTTGACAAAGCTAACCGAACATCATCAAAATCATTTCGTGGCCCGGGGATGGCTGAGGGATTGAAGATACTCGAGAAGGTAAAAATAGCTTATGACATTCCTATAGTGACAGATGTGCATGAGACCATCCAGTGTGAAGCAGTTGGCAGAGTTGCAGATATCATTCAGATTCCAGCATTCTTGTGTCGCCAAACAGATCTTCTAGTTGCAGCAGCCAAAACTGGGAAAATTATCAACATTAAGAAGGGCCAGTTCTGTGCTCCTTCTGTGATGACAAATTCAGCTGAAAAGGTTCGGTTAGCTGGAAATCCTAATGTGATGGTTTGTGAGAGAGGAACAATGTTTGGATACAATGATTTGATTGTTGATCCACGTAACTTGGAGTGGATGAGAGAAGCCAATTGTCCCATTGTAGCTGATATAACTCACTCACTACAACAGCCTGCTGGAAAGATGTTGGATGGGGGAGGTGTTGCTAGTGGAGGTCTTCGAGAACTAATACCTTGCATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGCCTTTGCGCCACTTTAAGGAGCTACTTGAAGAGCTTGTAGCCATTGCTAGGGTAAGCAAAGGGAAGCAACGGTTCAACATTGATCTCACACCATTTCGTGAATAA

>Glyma.18g248300.3 sequence-type=CDS polypeptide=Glyma.18g248300.3.p locus=Glyma.18g248300 id=Glyma.18g248300.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGATCCCTCTGCGGCATTGCTATTTAACCACCTCAAGGGTGCAGACCCGTTCTTCCTGCTAGCGGGTCCTAATGTGATTGAATCGGAGGAGCACATTCTGCGGATGGCTAAGAACATCAAGAGTGTTGCATCTGAAGTTGGAATACCATTGGTTTTCAAGTCAAGCTTTGACAAAGCTAACCGAACATCATCAAAATCATTTCGTGGCCCGGGGATGGCTGAGGGATTGAAGATACTCGAGAAGGTAAAAATAGCTTATGACATTCCTATAGTGACAGATGTGCATGAGACCATCCAGTGTGAAGCAGTTGGCAGAGTTGCAGATATCATTCAGATTCCAGCATTCTTGTGTCGCCAAACAGATCTTCTAGTTGCAGCAGCCAAAACTGGGAAAATTATCAACATTAAGAAGGGCCAGTTCTGTGCTCCTTCTGTGATGACAAATTCAGCTGAAAAGGTTCGGTTAGCTGGAAATCCTAATGTGATGGTTTGTGAGAGAGGAACAATGTTTGGATACAATGATTTGATTGTTGATCCACGTAACTTGGAGTGGATGAGAGAAGCCAATTGTCCCATTGTAGCTGATATAACTCACTCACTACAACAGCCTGCTGGAAAGATGTTGGATGGGGGAGGTGTTGCTAGTGGAGGTCTTCGAGAACTAATACCTTGCATTGCAAGGACAGCAGTTGCCGTTGGAGTGGATGGGATCTTCATGGAGGTGCATGATGATCCACTGAATGCACCTGTTGATGGCCCAACACAGTGGCCTTTGCGCCACTTTAAGGAGCTACTTGAAGAGCTTGTAGCCATTGCTTTTTGA
Predicted protein sequences of Glyma.18g248300
>Glyma.18g248300.1.p sequence-type=predicted peptide transcript=Glyma.18g248300.1 locus=Glyma.18g248300 id=Glyma.18g248300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPSAALLFNHLKGADPFFLLAGPNVIESEEHILRMAKNIKSVASEVGIPLVFKSSFDKANRTSSKSFRGPGMAEGLKILEKVKIAYDIPIVTDVHETIQCEAVGRVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMTNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPIVADITHSLQQPAGKMLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHFKELLEELVAIARVSKGKQRFNIDLTPFRE*

>Glyma.18g248300.2.p sequence-type=predicted peptide transcript=Glyma.18g248300.2 locus=Glyma.18g248300 id=Glyma.18g248300.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPSAALLFNHLKGADPFFLLAGPNVIESEEHILRMAKNIKSVASEVGIPLVFKSSFDKANRTSSKSFRGPGMAEGLKILEKVKIAYDIPIVTDVHETIQCEAVGRVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMTNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPIVADITHSLQQPAGKMLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHFKELLEELVAIARVSKGKQRFNIDLTPFRE*

>Glyma.18g248300.3.p sequence-type=predicted peptide transcript=Glyma.18g248300.3 locus=Glyma.18g248300 id=Glyma.18g248300.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MDPSAALLFNHLKGADPFFLLAGPNVIESEEHILRMAKNIKSVASEVGIPLVFKSSFDKANRTSSKSFRGPGMAEGLKILEKVKIAYDIPIVTDVHETIQCEAVGRVADIIQIPAFLCRQTDLLVAAAKTGKIINIKKGQFCAPSVMTNSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPRNLEWMREANCPIVADITHSLQQPAGKMLDGGGVASGGLRELIPCIARTAVAVGVDGIFMEVHDDPLNAPVDGPTQWPLRHFKELLEELVAIAF*






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