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Report for Sequence Feature Glyma.18g241000

Feature Type:gene_model
Chromosome:Gm18
Start:53233973
stop:53238970
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g241000
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G16530.1AT PIN5 JGI N/AIEA
GO:0055085GO-bp transmembrane transport JGI N/AIEA
GO:0016021GO-cc integral component of membrane JGI N/AIEA
K13947KEGG Transporters JGI N/AIEA
PTHR31752PantherFam AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED JGI N/AIEA
PTHR31752:SF2PantherFam AUXIN EFFLUX CARRIER COMPONENT 5 JGI N/AIEA
PF03547Pfam Membrane transport protein JGI N/AIEA

Proteins Associated with Glyma.18g241000
LocusGene SymbolProtein Name
PIN5b PIN-formed 5 gene b

Gene model name correspondences to Glyma.18g241000 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g47630 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g241000
>Glyma.18g241000.1 sequence-type=CDS polypeptide=Glyma.18g241000.1.p locus=Glyma.18g241000 id=Glyma.18g241000.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATAGGGTGGGAAGATGTATACAAAGTAGTGGTAGCAGTGGTGCCACTCTATTTTGCTCTATTATTAGGGTATGGTTCACTGAAGTGGTGGAACATCTTCACCAAGGAGCAATGTGAAGCAATAAACAAGCTAGTTTGTTACTTCACATTGCCACTCTTCATCTTCGAGTTCACTGCTCACATCGACCCTTTCAAGATGAACTTCTCGTTCATAGCAGCAGACACCATATCGAAGTTCATCATCATGGTGGTACTTGCCCTCTGGGCCAAGTGCACTCCTAAATGCACCTTTTGCTGGTCCATAATCAGCTTCTCTTTGTGCAATCTCACCAACGCTGTTGTTGTTGGGGTTCCAATGGTGAAGCCCATGTATGGAGCCCTAGGTGTGGACCTTGTGGTTCAGTCCTCGGTTCTTCAGGCCACCATATGGCTCCCTTTGCTTCTCTTTGTGATGGAGTTTTGGAGAACGGGAATTGAGGGCACCACCACCACCACCGTAAAACCAAGATCAAAAACAATGATCAATAAGAATGAAGGTGGAGGAGGGAAAGATGTGGAGGCTGTTGACGTGAAAGAAGAGTTGATGTTGGAAGAGAGTGTTACTAGTAGGCTTCCTTTTTGCAAGGTGATGAAGCTTGTGTGGCGCAAACTTGCAACAAACCCTAACTCCTATGGCTGTGTGATTGGCATTTCCTGGGCTTTCATATCCAACAGGTGGAATTTGGAGATGCCAAGTATGTTAGAAGGGTCTATACAGATAATGTCAAAGGCCGGGACGGGCACTGCCATGTTTAGTATGGGTATTTTCATGGCACTTCAGGAGAAGTTGATTGCTTGTGGACCAAGCATGACCTTAATCGGTTTGGTTTTAAAGTTCATTGCGGGCCCTGCGGCTACGGCTATTGGTGCCATTGCTGTAGGATTGCGTGGTGACGTTTTGCGAGTCGTCATCATTCAGGCTGCTGTGCCACAGTCCATCACATCCTTCATTTTTGCTAAAGAATACGGATTGCATCCGGAGGTTCTCAGCACTGCGGTGATCTTTGGTATGATTGTTTCACTTCCCGTCTTAGTTGCCTACTACGCAATATTGGAGTTTGTACATTGA

>Glyma.18g241000.2 sequence-type=CDS polypeptide=Glyma.18g241000.2.p locus=Glyma.18g241000 id=Glyma.18g241000.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGATAGGGTGGGAAGATGTATACAAAGTAGTGGTAGCAGTGGTGCCACTCTATTTTGCTCTATTATTAGGGTATGGTTCACTGAAGTGGTGGAACATCTTCACCAAGGAGCAATGTGAAGCAATAAACAAGCTAGTTTGTTACTTCACATTGCCACTCTTCATCTTCGAGTTCACTGCTCACATCGACCCTTTCAAGATGAACTTCTCGTTCATAGCAGCAGACACCATATCGAAGTTCATCATCATGGTGGTACTTGCCCTCTGGGCCAAGTGCACTCCTAAATGCACCTTTTGCTGGTCCATAATCAGCTTCTCTTTGTGCAATCTCACCAACGCTGTTGTTGTTGGGGTTCCAATGGTGAAGCCCATGTATGGAGCCCTAGGTGTGGACCTTGTGGTTCAGTCCTCGGTTCTTCAGGCCACCATATGGCTCCCTTTGCTTCTCTTTGTGATGGAGTTTTGGAGAACGGGAATTGAGGGCACCACCACCACCACCGTAAAACCAAGATCAAAAACAATGATCAATAAGAATGAAGGTGGAGGAGGGAAAGATGTGGAGGCTGTTGACGTGAAAGAAGAGTTGATGTTGGAAGAGAGTGTTACTAGTAGGCTTCCTTTTTGCAAGGTGATGAAGCTTGTGTGGCGCAAACTTGCAACAAACCCTAACTCCTATGGCTGTGTGATTGGCATTTCCTGGGCTTTCATATCCAACAGGTGGAATTTGGAGATGCCAAGTATGTTAGAAGGGTCTATACAGATAATGTCAAAGGCCGGGACGGGCACTGCCATGTTTAGTATGGGTATTTTCATGGCACTTCAGGAGAAGTTGATTGCTTGTGGACCAAGCATGACCTTAATCGGTTTGGTTTTAAAGTTCATTGCGGGCCCTGCGGCTACGGCTATTGGTGCCATTGCTGTAGGATTGCGTGGTGACGTTTTGCGAGTCGTCATCATTCAGGCTGCTGTGCCACAGTCCATCACATCCTTCATTTTTGCTAAAGAATACGGATTGCATCCGGAGGTTCTCAGCACTGCGTAA
Predicted protein sequences of Glyma.18g241000
>Glyma.18g241000.1.p sequence-type=predicted peptide transcript=Glyma.18g241000.1 locus=Glyma.18g241000 id=Glyma.18g241000.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIGWEDVYKVVVAVVPLYFALLLGYGSLKWWNIFTKEQCEAINKLVCYFTLPLFIFEFTAHIDPFKMNFSFIAADTISKFIIMVVLALWAKCTPKCTFCWSIISFSLCNLTNAVVVGVPMVKPMYGALGVDLVVQSSVLQATIWLPLLLFVMEFWRTGIEGTTTTTVKPRSKTMINKNEGGGGKDVEAVDVKEELMLEESVTSRLPFCKVMKLVWRKLATNPNSYGCVIGISWAFISNRWNLEMPSMLEGSIQIMSKAGTGTAMFSMGIFMALQEKLIACGPSMTLIGLVLKFIAGPAATAIGAIAVGLRGDVLRVVIIQAAVPQSITSFIFAKEYGLHPEVLSTAVIFGMIVSLPVLVAYYAILEFVH*

>Glyma.18g241000.2.p sequence-type=predicted peptide transcript=Glyma.18g241000.2 locus=Glyma.18g241000 id=Glyma.18g241000.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MIGWEDVYKVVVAVVPLYFALLLGYGSLKWWNIFTKEQCEAINKLVCYFTLPLFIFEFTAHIDPFKMNFSFIAADTISKFIIMVVLALWAKCTPKCTFCWSIISFSLCNLTNAVVVGVPMVKPMYGALGVDLVVQSSVLQATIWLPLLLFVMEFWRTGIEGTTTTTVKPRSKTMINKNEGGGGKDVEAVDVKEELMLEESVTSRLPFCKVMKLVWRKLATNPNSYGCVIGISWAFISNRWNLEMPSMLEGSIQIMSKAGTGTAMFSMGIFMALQEKLIACGPSMTLIGLVLKFIAGPAATAIGAIAVGLRGDVLRVVIIQAAVPQSITSFIFAKEYGLHPEVLSTA*






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