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Report for Sequence Feature Glyma.18g236600

Feature Type:gene_model
Chromosome:Gm18
Start:52764556
stop:52768030
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g236600
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G42340.1AT PUB15 JGI N/AIEA
6.3.2.19EC JGI N/AIEA
GO:0016567GO-bp protein ubiquitination JGI N/AIEA
GO:0004842GO-mf ubiquitin-protein transferase activity JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR23315PantherFam U BOX DOMAIN-CONTAINING JGI N/AIEA
PTHR23315:SF49PantherFam RING-TYPE E3 UBIQUITIN TRANSFERASE JGI N/AIEA
PF00514Pfam Armadillo/beta-catenin-like repeat JGI N/AIEA
PF04564Pfam U-box domain JGI N/AIEA

Gene model name correspondences to Glyma.18g236600 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g47120 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g236600
>Glyma.18g236600.1 sequence-type=CDS polypeptide=Glyma.18g236600.1.p locus=Glyma.18g236600 id=Glyma.18g236600.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGACGACGATGGAGGAAGAGAGAGACGTGTCATCGGATGAGTTATCAGAGGAGAAATATGACCCAGTGGAGGAGATCCAAAGAGTCATCCAATCCATAGTTCAATTCGGCGAGTACCGGAGGACACAGAGGAAGGAGAGCCACAACCTCGTGCGCCGTTTCAAGCTCATGTTGCCTCTCTGGGAAGAGCTTCGTGACCTCCCACAACCCTTCCCAGAAATCGGCGTCACTTGGTTATCCAAAGTCAAGGATGTGCTTTTGTTCGCCAAGGATTTGTTGAAACTATGTAGCCAAGGAAGCAAGATCCACCTCGCTTTGGAAACCGAGGTAGTTATGATCACGTTTCAGAAAGTGTATGACAAATTAAGCCAAGCGTTTGGTGATGTGCCTTGTGATGAAATGGGTATCTCAGATGAAGTCAAGGAACAACTTGAGCTAATGCACGTGCAACTCAAGCGAGCCAGGAGAAGAACTGATACACAGGACATAGAACTTGCAATGGATATGATGGTTGTGTTTTCTGATAATGATGACAGAAATGCTGATAGTGCTATCATTGAGAGGCTGGCTAAAAAGCTGGAGCTTCATAGTGTTGAGGATCTCAATATAGAAACATTGGCTATTAGGAACCTTGCTGCAGAAAGAAAAGGGCAACAGGCTGAGAGCACTCAGAAAATAATTTACCTTCTTAACAAATTCAAACGAATTGCAGGCATGGAAGAAACCGGCATCCTTGATGATCCTGCCGCACCCAAGATGCTTGAGAGGTGCACCTCTTTGGTCATCCCTCATGAGTTTCTCTGCCCAATTACACTAGAAATCATGACAGATCCTGTCATTGTAACAAGTGGACAGACATATGAAAGGGAAAGCATAAAGAAGTGGTTCCAATCCAACCATAACACATGCCCAAAGACCAGGCAACCTTTGGAACACTTGTCATTGGCACCAAACCGTGCCTTGAAAAGCTTGATTGAAGAATGGTGTGAGAACAACAACTTCAAACTTCCTAAAAAATACAATTCTTCAGGTCCAGAAAGCTGTCCTATAGACAGCAAAGAGGAAATTCCAGCTTTGGTTGAGAGCCTGTCATCTATTCATTTAGAAGAGCAGAGAAAAGCAGTGGAGAAGATACGTATGCTATCAAAGGAAAATCCTGAGAACAGAGTTTTGGTTGCTGAACATGGAGGAATACCACCTCTAGTGCAACTTTTGTCCTATCCAGATTCAAAAATACAAGAACATGCAGTAACAGCACTTTTGAATTTATCAATTGATGAGGGTAACAAGAGTCTTATATCCACAGAAGGTGCCATTCCAGCTATCATAGAAGTTTTGGAGAATGGTAGTTGTGTGGCTAAGGAGAACTCAGCCGCAGCTTTATTCAGCTTGTCAATGCTTGATGAGATTAAAGAGATTGTTGGTCAATCAAATGGGTACCCGCCTTTGGTGGATTTGTTGAGGAATGGAACAATTAGAGGGAAGAAAGATGCTGTGACAGCTCTTTTTAACTTATCTATCAACCATGCAAATAAAGGTAGGGCCATTAGAGCTGGCATTGTGACACCCTTGCTTCAATTGCTCAAGGACAGAAACTTGGGCATGATTGATGAGGCTCTCTCCATTTTGTTACTCCTTGTATCAAATTCAGAAGCAAGACAAGAGATTGGACAACTTAGTTTCATTGAAACCCTTGTTGAGTTCATGAGAGAAGGGAGTCCAAAGAACAAGGAATGTGCAGCATCTGTTCTTCTTGAGTTGTGCTCAAGTAACTCATCCTTTACATTGGCAGCACTTCAGTTTGGAGTGTATGAGTATTTAATGGAGATAAAACAAAATGGAACAAATAGAGCACAGAGGAAAGCAAATGCAATCTTAGATCTCATTAGCAGGAGCGAGCAAATTTAA
Predicted protein sequences of Glyma.18g236600
>Glyma.18g236600.1.p sequence-type=predicted peptide transcript=Glyma.18g236600.1 locus=Glyma.18g236600 id=Glyma.18g236600.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MTTMEEERDVSSDELSEEKYDPVEEIQRVIQSIVQFGEYRRTQRKESHNLVRRFKLMLPLWEELRDLPQPFPEIGVTWLSKVKDVLLFAKDLLKLCSQGSKIHLALETEVVMITFQKVYDKLSQAFGDVPCDEMGISDEVKEQLELMHVQLKRARRRTDTQDIELAMDMMVVFSDNDDRNADSAIIERLAKKLELHSVEDLNIETLAIRNLAAERKGQQAESTQKIIYLLNKFKRIAGMEETGILDDPAAPKMLERCTSLVIPHEFLCPITLEIMTDPVIVTSGQTYERESIKKWFQSNHNTCPKTRQPLEHLSLAPNRALKSLIEEWCENNNFKLPKKYNSSGPESCPIDSKEEIPALVESLSSIHLEEQRKAVEKIRMLSKENPENRVLVAEHGGIPPLVQLLSYPDSKIQEHAVTALLNLSIDEGNKSLISTEGAIPAIIEVLENGSCVAKENSAAALFSLSMLDEIKEIVGQSNGYPPLVDLLRNGTIRGKKDAVTALFNLSINHANKGRAIRAGIVTPLLQLLKDRNLGMIDEALSILLLLVSNSEARQEIGQLSFIETLVEFMREGSPKNKECAASVLLELCSSNSSFTLAALQFGVYEYLMEIKQNGTNRAQRKANAILDLISRSEQI*






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