SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g230900

Feature Type:gene_model
Chromosome:Gm18
Start:52237589
stop:52242289
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g230900
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G46210.6AT JGI N/AIEA
K12590KEGG Messenger RNA biogenesis JGI N/AIEA
KOG1069 KOG Exosomal 3'-5' exoribonuclease complex, subunit Rrp46 JGI N/AIEA
PTHR11953PantherFam EXOSOME COMPLEX COMPONENT JGI N/AIEA
PTHR11953:SF1PantherFam EXOSOME COMPLEX COMPONENT RRP46 JGI N/AIEA
PF01138Pfam 3' exoribonuclease family, domain 1 JGI N/AIEA
PF03725Pfam 3' exoribonuclease family, domain 2 JGI N/AIEA

Gene model name correspondences to Glyma.18g230900 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g46510 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g230900
>Glyma.18g230900.1 sequence-type=CDS polypeptide=Glyma.18g230900.1.p locus=Glyma.18g230900 id=Glyma.18g230900.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTGACAGACCTGACGGCCGGACTCCCAATCAACTGAGACCCCTGGTCTGCTCCTGCTCCATCCTACATCGATCCCATGGCTCGGCCAGTTGGGCTCAAGGTGAAACTAAAGTGCTTGCTGCAGTTTATGGGCCCAAAGCTGGAACCAAGAAGAGCGAAAACCCCGAAAAAGCATCCATTGAAGTTATTTGGAAACCGAAGACTGGACAAATTGGAAAAGTGGAGAAGGAGTATGAGATGATATTGAAGAGAACTTTGGAAAGCATCTGCATTCGAACAATATATCCCAACACCACCACTTCGGTTATAGTCCAGGTTGTCCACGATGATGGTGCTCTTCTTCCATGTGCAATAAATGCAGCATGCGCTGCACTTGTGGATGCCGGAATTCCCCTAAAACATCTTGCTGTAGCGATATGTTGTTCTGTAACAGATAGTGGCTGTATTATATTGGACCCGACCAAAGATGAAGAGGAGAAAATGAAAGCATTCATCAATTTAGTTTTTCCAAATACAATTGTTTCTGTCCTCCCAGAGGGATCACTGCAGGCGGGTAGTGAGCCTATGGCACATGGAATCATGACATCTATTACACAGGGTGCTATGTCAGTGGATGATTATCTTCACTGCCTAGAGCGAGGGCGTGCTGCTAGTGCAAGATTGTCTGAATTTGTGAGGAAGAACATAGAACTGAAATCTACAAGTGAGGCATCTAAAGCTGGGTGA

>Glyma.18g230900.2 sequence-type=CDS polypeptide=Glyma.18g230900.2.p locus=Glyma.18g230900 id=Glyma.18g230900.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTGACAGACCTGACGGCCGGACTCCCAATCAACTGAGACCCCTGGTCTGCTCCTGCTCCATCCTACATCGATCCCATGGCTCGGCCAGTTGGGCTCAAGGTGAAACTAAAGTGCTTGCTGCAGTTTATGGGCCCAAAGCTGGAACCAAGAAGAGCGAAAACCCCGAAAAAGCATCCATTGAAGTTATTTGGAAACCGAAGACTGGACAAATTGGAAAAGTGGAGAAGGAGTATGAGATGATATTGAAGAGAACTTTGGAAAGCATCTGCATTCGAACAATATATCCCAACACCACCACTTCGGTTATAGTCCAGGTTGTCCACGATGATGGTGCTCTTCTTCCATGTGCAATAAATGCAGCATGCGCTGCACTTGTGGATGCCGGAATTCCCCTAAAACATCTTGCTGATAGTGGCTGTATTATATTGGACCCGACCAAAGATGAAGAGGAGAAAATGAAAGCATTCATCAATTTAGTTTTTCCAAATACAATTGTTTCTGTCCTCCCAGAGGGATCACTGCAGGCGGGTAGTGAGCCTATGGCACATGGAATCATGACATCTATTACACAGGGTGCTATGTCAGTGGATGATTATCTTCACTGCCTAGAGCGAGGGCGTGCTGCTAGTGCAAGATTGTCTGAATTTGTGAGGAAGAACATAGAACTGAAATCTACAAGTGAGGCATCTAAAGCTGGGTGA

>Glyma.18g230900.3 sequence-type=CDS polypeptide=Glyma.18g230900.3.p locus=Glyma.18g230900 id=Glyma.18g230900.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTGACAGACCTGACGGCCGGACTCCCAATCAACTGAGACCCCTGGTCTGCTCCTGCTCCATCCTACATCGATCCCATGGCTCGGCCAGTTGGGCTCAAGGTGAAACTAAAGTGCTTGCTGCAGTTTATGGGCCCAAAGCTGGAACCAAGAAGAGCGAAAACCCCGAAAAAGCATCCATTGAAGTTATTTGGAAACCGAAGACTGGACAAATTGGAAAAGTGGAGAAGGAGTATGAGATGATATTGAAGAGAACTTTGGAAAGCATCTGCATTCGAACAATATATCCCAACACCACCACTTCGGTTATAGTCCAGGTTGTCCACGATGATGGTGCTCTTCTTCCATGTGCAATAAATGCAGCATGCGCTGCACTTGTGGATGCCGGAATTCCCCTAAAACATCTTGCTGTAGCGATATGTTGTTCTGTAACAGATAGTGGCTGTATTATATTGGACCCGACCAAAGATGAAGAGGAGAAAATGAAAGCATTCATCAATTTAGTTTTTCCAAATACAATTGTTTCTGTCCTCCCAGAGGGATCACTGCAGGCGGGTAGTGAGCCTATGGCACATGGAATCATGACATCTATTACACAGGGTGCTATGTCAGTGGATGATTATCTTCACTGCCTAGAGCGAGGGCGTGCTGCTAGTGCAAGATTGTCTGAATTTGTGAGGAAGAACATAGAACTGAAATCTACAAGTGAGGCATCTAAAGCTGGGTGA

>Glyma.18g230900.5 sequence-type=CDS polypeptide=Glyma.18g230900.5.p locus=Glyma.18g230900 id=Glyma.18g230900.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTGACAGACCTGACGGCCGGACTCCCAATCAACTGAGACCCCTGGTCTGCTCCTGCTCCATCCTACATCGATCCCATGGCTCGGCCAGTTGGGCTCAAGGTGAAACTAAAGTGCTTGCTGCAGTTTATGGGCCCAAAGCTGGAACCAAGAAGAGCGAAAACCCCGAAAAAGCATCCATTGAAGTTATTTGGAAACCGAAGACTGGACAAATTGGAAAAGTGGAGAAGGAGTATGAGATGATATTGAAGAGAACTTTGGAAAGCATCTGCATTCGAACAATATATCCCAACACCACCACTTCGGTTATAGTCCAGGTTGTCCACGATGATGGTGCTCTTCTTCCATGTGCAATAAATGCAGCATGCGCTGCACTTGTGGATGCCGGAATTCCCCTAAAACATCTTGCTGTAGCGATATGTTGTTCTGTAACAGATAGTGGCTGTATTATATTGGACCCGACCAAAGATGAAGAGGAGAAAATGAAAGCATTCATCAATTTAGTTTTTCCAAATACAATTGTTTCTGTCCTCCCAGAGGGATCACTGCAGGCGGGTAGTGAGCCTATGGCACATGGAATCATGACATCTATTACACAGGGTGCTATGTCAGTGGATGATTATCTTCACTGCCTAGAGCGAGGGCGTGCTGCTAGTGCAAGATTGTCTGAATTTGTGAGGAAGAACATAGAACTGAAATCTACAAGTGAGGCATCTAAAGCTGGGTGA

>Glyma.18g230900.6 sequence-type=CDS polypeptide=Glyma.18g230900.6.p locus=Glyma.18g230900 id=Glyma.18g230900.6.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTGACAGACCTGACGGCCGGACTCCCAATCAACTGAGACCCCTGGTCTGCTCCTGCTCCATCCTACATCGATCCCATGGCTCGGCCAGTTGGGCTCAAGGTGAAACTAAAGTGCTTGCTGCAGTTTATGGGCCCAAAGCTGGAACCAAGAAGAGCGAAAACCCCGAAAAAGCATCCATTGAAGTTATTTGGAAACCGAAGACTGGACAAATTGGAAAAGTGGAGAAGGAGTATGAGATGATATTGAAGAGAACTTTGGAAAGCATCTGCATTCGAACAATATATCCCAACACCACCACTTCGGTTATAGTCCAGCTTCTTCCATGTGCAATAAATGCAGCATGCGCTGCACTTGTGGATGCCGGAATTCCCCTAAAACATCTTGCTGTAGCGATATGTTGTTCTGTAACAGATAGTGGCTGTATTATATTGGACCCGACCAAAGATGAAGAGGAGAAAATGAAAGCATTCATCAATTTAGTTTTTCCAAATACAATTGTTTCTGTCCTCCCAGAGGGATCACTGCAGGCGGGTAGTGAGCCTATGGCACATGGAATCATGACATCTATTACACAGGGTGCTATGTCAGTGGATGATTATCTTCACTGCCTAGAGCGAGGGCGTGCTGCTAGTGCAAGATTGTCTGAATTTGTGAGGAAGAACATAGAACTGAAATCTACAAGTGAGGCATCTAAAGCTGGGTGA

>Glyma.18g230900.7 sequence-type=CDS polypeptide=Glyma.18g230900.7.p locus=Glyma.18g230900 id=Glyma.18g230900.7.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAGACTGACAGACCTGACGGCCGGACTCCCAATCAACTGAGACCCCTGGTCTGCTCCTGCTCCATCCTACATCGATCCCATGGCTCGGCCAGTTGGGCTCAAGGTGAAACTAAAGTGCTTGCTGCAGTTTATGGGCCCAAAGCTGGAACCAAGAAGAGCGAAAACCCCGAAAAAGCATCCATTGAAGTTATTTGGAAACCGAAGACTGGACAAATTGGAAAAGTGGAGAAGGAGTATGAGATGATATTGAAGAGAACTTTGGAAAGCATCTGCATTCGAACAATATATCCCAACACCACCACTTCGGTTATAGTCCAGCTTCTTCCATGTGCAATAAATGCAGCATGCGCTGCACTTGTGGATGCCGGAATTCCCCTAAAACATCTTGCTGATAGTGGCTGTATTATATTGGACCCGACCAAAGATGAAGAGGAGAAAATGAAAGCATTCATCAATTTAGTTTTTCCAAATACAATTGTTTCTGTCCTCCCAGAGGGATCACTGCAGGCGGGTAGTGAGCCTATGGCACATGGAATCATGACATCTATTACACAGGGTGCTATGTCAGTGGATGATTATCTTCACTGCCTAGAGCGAGGGCGTGCTGCTAGTGCAAGATTGTCTGAATTTGTGAGGAAGAACATAGAACTGAAATCTACAAGTGAGGCATCTAAAGCTGGGTGA
Predicted protein sequences of Glyma.18g230900
>Glyma.18g230900.1.p sequence-type=predicted peptide transcript=Glyma.18g230900.1 locus=Glyma.18g230900 id=Glyma.18g230900.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METDRPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPCAINAACAALVDAGIPLKHLAVAICCSVTDSGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG*

>Glyma.18g230900.2.p sequence-type=predicted peptide transcript=Glyma.18g230900.2 locus=Glyma.18g230900 id=Glyma.18g230900.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METDRPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPCAINAACAALVDAGIPLKHLADSGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG*

>Glyma.18g230900.3.p sequence-type=predicted peptide transcript=Glyma.18g230900.3 locus=Glyma.18g230900 id=Glyma.18g230900.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METDRPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPCAINAACAALVDAGIPLKHLAVAICCSVTDSGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG*

>Glyma.18g230900.5.p sequence-type=predicted peptide transcript=Glyma.18g230900.5 locus=Glyma.18g230900 id=Glyma.18g230900.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METDRPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQVVHDDGALLPCAINAACAALVDAGIPLKHLAVAICCSVTDSGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG*

>Glyma.18g230900.6.p sequence-type=predicted peptide transcript=Glyma.18g230900.6 locus=Glyma.18g230900 id=Glyma.18g230900.6.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METDRPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQLLPCAINAACAALVDAGIPLKHLAVAICCSVTDSGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG*

>Glyma.18g230900.7.p sequence-type=predicted peptide transcript=Glyma.18g230900.7 locus=Glyma.18g230900 id=Glyma.18g230900.7.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
METDRPDGRTPNQLRPLVCSCSILHRSHGSASWAQGETKVLAAVYGPKAGTKKSENPEKASIEVIWKPKTGQIGKVEKEYEMILKRTLESICIRTIYPNTTTSVIVQLLPCAINAACAALVDAGIPLKHLADSGCIILDPTKDEEEKMKAFINLVFPNTIVSVLPEGSLQAGSEPMAHGIMTSITQGAMSVDDYLHCLERGRAASARLSEFVRKNIELKSTSEASKAG*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo