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Report for Sequence Feature Glyma.18g221400

Feature Type:gene_model
Chromosome:Gm18
Start:50854760
stop:50858212
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g221400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G01960.1AT SEC7-like guanine nucleotide exchange family protein JGI N/AIEA
GO:0032012GO-bp regulation of ARF protein signal transduction EnsemblGenomesN/AIEA
GO:0032012GO-bp regulation of ARF protein signal transduction JGI N/AIEA
GO:0065009GO-bp regulation of molecular function EnsemblGenomesN/AIEA
GO:0005086GO-mf ARF guanyl-nucleotide exchange factor activity EnsemblGenomesN/AIEA
GO:0005086GO-mf ARF guanyl-nucleotide exchange factor activity JGI N/AIEA
PTHR10663Panther GUANYL-NUCLEOTIDE EXCHANGE FACTOR JGI N/AIEA
PTHR10663:SF42Panther PROTEIN EFA-6, ISOFORM B JGI N/AIEA
PF01369PFAM Sec7 domain JGI N/AIEA

Expression Patterns of Glyma.18g221400
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g221400 not represented in the dataset
Glyma.18g221400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g221400 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g45356 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g221400
>Glyma.18g221400.1 sequence-type=CDS polypeptide=Glyma.18g221400.1.p locus=Glyma.18g221400 ID=Glyma.18g221400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGGAGTATGGCTTTGCCTCTTGGGCCTTGCTGTTTGTAACTCCTTATTGCTATTCATATCAGAATTCCTCATCAATGCCAACAAAGTGGGTAATTCACCAGAGGAAATAGCTGCTTTTCTTAAAGATGCATCTGGGTTGAACAAGACTTTCATTGGTGATTATCTAGGAGAAAGGGAAGAGTTATCCTTGAAAGTAATGCATGCATATGTGGATTCTTTTGACTTTCAAGGGATGGAGTTTGATGAGGCAATCAGGGCCTTTCTTCAAGGCTTTAGATTGCCTGGTGAGGCACAGAAAATTGATCGAATCATGGAAAAGTTTGCAGAACGATATTGCAAATGTAATCCAAAAGTCTTTTCTAGTGCTGATACAGCATATGTCCTTGCATATTCTGTGATACTGCTTAATACCGATGCCCACAATCCTATGGTGAAAAACAAGATGTCGGCTGAAGATTTCATAAAAAATAATCGTGGCATAGATGATGGAAAAGATGTACCAGAGGAATACTTAAGGTCTTTGTATGAACGGATATCTAGAAATGAGATCAAAATGAAAGAAGTTGATCTGGAATCCCAGCAAAAACAGGCTGTGAACTCTAACAGACTTTCAGGCTTGGATAGTATATTGAATATTGTGGTCCGGAAGCATGGGGAAGACAGTAATATGGAGACCAGTGATGATCGAATCCAACATATGCAAGAACAATTCAAATAA
Predicted protein sequences of Glyma.18g221400
>Glyma.18g221400.1.p sequence-type=predicted peptide transcript=Glyma.18g221400.1 locus=Glyma.18g221400 ID=Glyma.18g221400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MGVWLCLLGLAVCNSLLLFISEFLINANKVGNSPEEIAAFLKDASGLNKTFIGDYLGEREELSLKVMHAYVDSFDFQGMEFDEAIRAFLQGFRLPGEAQKIDRIMEKFAERYCKCNPKVFSSADTAYVLAYSVILLNTDAHNPMVKNKMSAEDFIKNNRGIDDGKDVPEEYLRSLYERISRNEIKMKEVDLESQQKQAVNSNRLSGLDSILNIVVRKHGEDSNMETSDDRIQHMQEQFK*






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