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Report for Sequence Feature Glyma.18g204100

Feature Type:gene_model
Chromosome:Gm18
Start:48687437
stop:48688227
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g204100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G38260.1AT Protein kinase superfamily protein JGI N/AIEA
GO:0006468GO-bp protein phosphorylation EnsemblGenomesN/AIEA
GO:0006468GO-bp protein phosphorylation JGI N/AIEA
GO:0004672GO-mf protein kinase activity EnsemblGenomesN/AIEA
GO:0004672GO-mf protein kinase activity JGI N/AIEA
GO:0005524GO-mf ATP binding EnsemblGenomesN/AIEA
GO:0005524GO-mf ATP binding JGI N/AIEA
KOG2345 KOG Serine/threonine protein kinase/TGF-beta stimulated factor JGI N/AIEA
PTHR24420Panther LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE JGI N/AIEA
PTHR24420:SF441Panther JGI N/AIEA
PF00069PFAM Protein kinase domain JGI N/AIEA
PWY-6952SoyCyc9 glycerophosphodiester degradation Plant Metabolic Network ISS
GN7V-51995SoyCyc9-rxn glycerophosphodiester phosphodiesterase Plant Metabolic Network ISS

Expression Patterns of Glyma.18g204100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g204100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g43440 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g204100
>Glyma.18g204100.1 sequence-type=CDS polypeptide=Glyma.18g204100.1.p locus=Glyma.18g204100 ID=Glyma.18g204100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTGGAAAAATCCAATACCAATGGCGAAGATTCTATTAGTGAATTCGCAACCATTGGAAGGATACACCATGTGAATGTAGTTAGGCTTATTGGATATTGTGTTGAGGGACTAAAGCGCGCACTTGTTTATGAATTCATGCCCTTTGGCTCTCTTGACAAGTATATATTCCCTAAAGAAGAAAATATCCCCTTAAGTTATGATCAAATATATCAAATATCTCTTGGAGTAGCCCATGGGATTGCCTATTTGCATGAGGGGTGTGACATGCAAATTCTACATTTTGATATCAAGCCCTACAACATTCTTCTTGACGAAAACTTCGTCCCAAAAATTTCAGATTTTGTACTTGCAAAGCTGTATCCTCATCATCCTTTGACTGCTGCAAGAGGCACAATTGGCTACATGGCGCCAGAATTGTTCTATAGGAATATTGGAGTAGTCTCCTTCAAGGCTGAAGTTTACAGCTTTGGAATGTTGTTGATGGAAATGGCGTATAGACAGAAGAATGTGAATTCTCAAGCAGAAAACTCAAGCCAAGTTTTCTTTCCCACATGGATTTATGATCAATTTAATGAAGGAGAAGACATAGAATTGGATGATAGCAAAGAGGAGGAAAACAATATAGTAAAGAAGATGATCATAGTTGCACTTTACTGCATTCAATTAAAACCCTATTACCATCCTTCAATGAAAAAAGTAGTAGAGATGCTAGAAGAGGAACTTGATATCCTAGAAATGCCTCCAAAGCCTTTGTTGTATCCTATGAAACACCGATAG
Predicted protein sequences of Glyma.18g204100
>Glyma.18g204100.1.p sequence-type=predicted peptide transcript=Glyma.18g204100.1 locus=Glyma.18g204100 ID=Glyma.18g204100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MLEKSNTNGEDSISEFATIGRIHHVNVVRLIGYCVEGLKRALVYEFMPFGSLDKYIFPKEENIPLSYDQIYQISLGVAHGIAYLHEGCDMQILHFDIKPYNILLDENFVPKISDFVLAKLYPHHPLTAARGTIGYMAPELFYRNIGVVSFKAEVYSFGMLLMEMAYRQKNVNSQAENSSQVFFPTWIYDQFNEGEDIELDDSKEEENNIVKKMIIVALYCIQLKPYYHPSMKKVVEMLEEELDILEMPPKPLLYPMKHR*






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