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Report for Sequence Feature Glyma.18g203700

Feature Type:gene_model
Chromosome:Gm18
Start:48571610
stop:48571858
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g203700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
ATCG00380.1AT chloroplast ribosomal protein S4 JGI N/AIEA
GO:0005622GO-cc intracellular EnsemblGenomesN/AIEA
GO:0005622GO-cc intracellular JGI N/AIEA
GO:0019843GO-mf rRNA binding EnsemblGenomesN/AIEA
GO:0019843GO-mf rRNA binding JGI N/AIEA
PTHR11831Panther 30S 40S RIBOSOMAL PROTEIN JGI N/AIEA
PTHR11831:SF6Panther SUBFAMILY NOT NAMED JGI N/AIEA
PF00163PFAM Ribosomal protein S4/S9 N-terminal domain JGI N/AIEA

Expression Patterns of Glyma.18g203700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g203700 not represented in the dataset
Glyma.18g203700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g203700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g43353 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g203700
>Glyma.18g203700.1 sequence-type=CDS polypeptide=Glyma.18g203700.1.p locus=Glyma.18g203700 ID=Glyma.18g203700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTCACGTTACAGAGGACCTCGTTTCAAGAAAATACGTTGTCTGGGGTCTTTACCAGGACTAACTAGTAAAAGGCCAACAGTCAAAAGCGAACTTAGAAATCAATCGCGCTCCAGTAAAAAATCTCAATATCGTATTGGTTTAGAAGAAAAACAAAAATTGCGTTTTCATTATGGTCTTACAGAACGACAATTGCTTAAATACGTTCGTGAAATTATAATTTTAAAAACGAGAGAAAAAAAATCTTGA
Predicted protein sequences of Glyma.18g203700
>Glyma.18g203700.1.p sequence-type=predicted peptide transcript=Glyma.18g203700.1 locus=Glyma.18g203700 ID=Glyma.18g203700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MSRYRGPRFKKIRCLGSLPGLTSKRPTVKSELRNQSRSSKKSQYRIGLEEKQKLRFHYGLTERQLLKYVREIIILKTREKKS*






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