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Report for Sequence Feature Glyma.18g202800

Feature Type:gene_model
Chromosome:Gm18
Start:48675944
stop:48681733
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g202800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G51840.1AT ACX4,ATG6,ATSCX JGI N/AIEA
1.3.3.6EC acyl-CoA oxidase JGI N/AIEA
GO:0008152GO-bp metabolic process JGI N/AIEA
GO:0055114GO-bp obsolete oxidation-reduction process JGI N/AIEA
GO:0003995GO-mf acyl-CoA dehydrogenase activity JGI N/AIEA
GO:0016627GO-mf oxidoreductase activity, acting on the CH-CH group of donors JGI N/AIEA
GO:0050660GO-mf flavin adenine dinucleotide binding JGI N/AIEA
K00232KEGG PPAR signaling pathway JGI N/AIEA
PTHR10909PantherFam ELECTRON TRANSPORT OXIDOREDUCTASE JGI N/AIEA
PF00441Pfam Acyl-CoA dehydrogenase, C-terminal domain JGI N/AIEA
PF02770Pfam Acyl-CoA dehydrogenase, middle domain JGI N/AIEA
PF02771Pfam Acyl-CoA dehydrogenase, N-terminal domain JGI N/AIEA

Gene model name correspondences to Glyma.18g202800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g43240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g202800
>Glyma.18g202800.1 sequence-type=CDS polypeptide=Glyma.18g202800.1.p locus=Glyma.18g202800 id=Glyma.18g202800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTCTCGCCCCAATCTAGATAATGCGAATATGAAGATGCCGTCATATTTTAATTTTCCAGCACTTGATGTTTCTGTTGCATTTCCACAGGCCACTCCAGCCTCTACTTTTCCTCCTTGTGCTTCAGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAGAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGATCTTTCCATAGCTGGAAGTGCTGTTGCTGCAGCAGAAGTTGCTAGAGTTGATGCAAGCTGCTCAACTTTCTTTTTGGTCCATTCTTCCTTGGCAATGCTCACTATTGCATTGTGTGGGTCTGAAGCTCAGAAGCAAAAGTATCTACCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAAGACCACAGCAACAAAGGTGGAAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTTGCTAGGAATATGACAACTAATCAAATAAATGGATATATTGTCAAAAAGGATGCGCCAGGTTTAACAGTAACAAAAATGGAGAACAAAATTGGACTTAGGATCGTACAAAATGGAGACATAGTTATGGGGAAAGTTTTTGTCCCTGATGATGACAGACTAGAAGGAGTCAATTCTTTTCAGGATACAAACAAGGTACTTGCTGTTTCCCGTGTAATGGTTGCTTGGCAACCTATTGGTTTATCAATGGGCATCTATGATATGTGTCATAGGTACCTAAAGGAGAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAGAAACTTGTTCAAATGCTAGGTAACATTCAAGCAATGATTCTTGTTGGTTGGCGCCTGTGCAAGTTGTATGAGAGTGGTAAAATGACACCAGGTCATGCTAGCTTGGGGAAGTCGTGGATTACCCTGAGGGCAAGAGAAACAGCTGCCTTGGGAAGAGAATTGCTTGGTGGCAATGGAATTTTGGCTGATTTTCTAGTGGCAAAGGCATTCTGTGATATAGAACCTATCTATACATTTGAAGGCACGTATGACATAAACACCTTGGTTACAGGCAGGGAAATTACTGGTTTTGCCAGCTTTAAGCCGGTTGCTCAAAAAAGTAGACTGTGA

>Glyma.18g202800.2 sequence-type=CDS polypeptide=Glyma.18g202800.2.p locus=Glyma.18g202800 id=Glyma.18g202800.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTCTCGCCCCAATCTAGATAATGCGAATATGAAGATGCCGTCATATTTTAATTTTCCAGCACTTGATGTTTCTGTTGCATTTCCACAGGCCACTCCAGCCTCTACTTTTCCTCCTTGTGCTTCAGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAGAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGATCTTTCCATAGCTGGAAGTGCTGTTGCTGCAGCAGAAGTTGCTAGAGTTGATGCAAGCTGCTCAACTTTCTTTTTGGTCCATTCTTCCTTGGCAATGCTCACTATTGCATTGTGTGGGTCTGAAGCTCAGAAGCAAAAGTATCTACCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAAGACCACAGCAACAAAGGTGGAAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTTGCTAGGAATATGACAACTAATCAAATAAATGGATATATTGTCAAAAAGGATGCGCCAGGTTTAACAGTAACAAAAATGGAGAACAAAATTGGACTTAGGATCGTACAAAATGGAGACATAGTTATGGGGAAAGTTTTTGTCCCTGATGATGACAGACTAGAAGGAGTCAATTCTTTTCAGGATACAAACAAGGTACCTAAAGGAGAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAGAAACTTGTTCAAATGCTAGGTAA

>Glyma.18g202800.3 sequence-type=CDS polypeptide=Glyma.18g202800.3.p locus=Glyma.18g202800 id=Glyma.18g202800.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGTGTCTCGCCCCAATCTAGATAATGCGAATATGAAGATGCCGTCATATTTTAATTTTCCAGCACTTGATGTTTCTGTTGCATTTCCACAGGCCACTCCAGCCTCTACTTTTCCTCCTTGTGCTTCAGATTATTTTCATTTCAATGACTTGTTGAAACCGGAGGAGCAGGCCGTGAGGAACAGAGTGAGAGAGTGTATGGAAAAAGAAATTGCTCCTATAATGACTGAGTACTGGGAGAAGGCTGAATTCCCATTTCATGTTATCCCAAAGTTTGCTGCCCTGCGTATTGCTGGTGGCACAATTAAGGGTTATGGTTGTCCTGATCTTTCCATAGCTGGAAGTGCTGTTGCTGCAGCAGAAGTTGCTAGAGTTGATGCAAGCTGCTCAACTTTCTTTTTGGTCCATTCTTCCTTGGCAATGCTCACTATTGCATTGTGTGGGTCTGAAGCTCAGAAGCAAAAGTATCTACCTTCTTTGGCTCAAATGAAAACTATAGCATGTTGGGCTTTGACTGAACCTGACTATGGAAGTGATGCCAGTGCTTTGAAGACCACAGCAACAAAGGTGGAAGGTGGTTGGATCCTTGATGGCCAAAAGAGATGGATAGGAAACAGTACATTTGCTGATTTGTTGGTTATCTTTGCTAGGAATATGACAACTAATCAAATAAATGGATATATTGTCAAAAAGGATGCGCCAGGTTTAACAGTAACAAAAATGGAGAACAAAATTGGACTTAGGATCGTACAAAATGGAGACATAGTTATGGGGAAAGTTTTTGTCCCTGATGATGACAGACTAGAAGGAGTCAATTCTTTTCAGGATACAAACAAGGTACCTAAAGGAGAGGAAACAGTTTGGAGCACCATTAGCAGCTTTCCAAATCAGTCAACAGAAACTTGTTCAAATGCTAGGTAA
Predicted protein sequences of Glyma.18g202800
>Glyma.18g202800.1.p sequence-type=predicted peptide transcript=Glyma.18g202800.1 locus=Glyma.18g202800 id=Glyma.18g202800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVSRPNLDNANMKMPSYFNFPALDVSVAFPQATPASTFPPCASDYFHFNDLLKPEEQAVRNRVRECMEKEIAPIMTEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPDLSIAGSAVAAAEVARVDASCSTFFLVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWALTEPDYGSDASALKTTATKVEGGWILDGQKRWIGNSTFADLLVIFARNMTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDIVMGKVFVPDDDRLEGVNSFQDTNKVLAVSRVMVAWQPIGLSMGIYDMCHRYLKERKQFGAPLAAFQISQQKLVQMLGNIQAMILVGWRLCKLYESGKMTPGHASLGKSWITLRARETAALGRELLGGNGILADFLVAKAFCDIEPIYTFEGTYDINTLVTGREITGFASFKPVAQKSRL*

>Glyma.18g202800.2.p sequence-type=predicted peptide transcript=Glyma.18g202800.2 locus=Glyma.18g202800 id=Glyma.18g202800.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVSRPNLDNANMKMPSYFNFPALDVSVAFPQATPASTFPPCASDYFHFNDLLKPEEQAVRNRVRECMEKEIAPIMTEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPDLSIAGSAVAAAEVARVDASCSTFFLVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWALTEPDYGSDASALKTTATKVEGGWILDGQKRWIGNSTFADLLVIFARNMTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDIVMGKVFVPDDDRLEGVNSFQDTNKVPKGEETVWSTISSFPNQSTETCSNAR*

>Glyma.18g202800.3.p sequence-type=predicted peptide transcript=Glyma.18g202800.3 locus=Glyma.18g202800 id=Glyma.18g202800.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MVSRPNLDNANMKMPSYFNFPALDVSVAFPQATPASTFPPCASDYFHFNDLLKPEEQAVRNRVRECMEKEIAPIMTEYWEKAEFPFHVIPKFAALRIAGGTIKGYGCPDLSIAGSAVAAAEVARVDASCSTFFLVHSSLAMLTIALCGSEAQKQKYLPSLAQMKTIACWALTEPDYGSDASALKTTATKVEGGWILDGQKRWIGNSTFADLLVIFARNMTTNQINGYIVKKDAPGLTVTKMENKIGLRIVQNGDIVMGKVFVPDDDRLEGVNSFQDTNKVPKGEETVWSTISSFPNQSTETCSNAR*






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