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Report for Sequence Feature Glyma.18g195700

Feature Type:gene_model
Chromosome:Gm18
Start:47022448
stop:47028331
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g195700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G38040.1AT acetyl Co-enzyme a carboxylase carboxyltransferase alpha subunit JGI N/AIEA
GO:0006633GO-bp fatty acid biosynthetic process EnsemblGenomesN/AIEA
GO:0006633GO-bp fatty acid biosynthetic process JGI N/AIEA
GO:0009317GO-cc acetyl-CoA carboxylase complex EnsemblGenomesN/AIEA
GO:0009317GO-cc acetyl-CoA carboxylase complex JGI N/AIEA
GO:0003989GO-mf acetyl-CoA carboxylase activity EnsemblGenomesN/AIEA
GO:0003989GO-mf acetyl-CoA carboxylase activity JGI N/AIEA
GO:0016740GO-mf transferase activity EnsemblGenomesN/AIEA
GO:0016874GO-mf ligase activity EnsemblGenomesN/AIEA
GO:0016874GO-mf ligase activity JGI N/AIEA
PTHR22855Panther ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED JGI N/AIEA
PTHR22855:SF3Panther JGI N/AIEA
PF03255PFAM Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JGI N/AIEA
PWY-7388SoyCyc9 octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) Plant Metabolic Network ISS
GN7V-67932SoyCyc9-rxn acetyl-CoA carboxylase Plant Metabolic Network ISS

Proteins Associated with Glyma.18g195700
LocusGene SymbolProtein Name
ACCA-1 alpha-carboxyltransferase aCT-1 precursor

Expression Patterns of Glyma.18g195700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g195700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g42280 Wm82.a1.v1.1IGC As supplied by JGI


Transcripts of Glyma.18g195700
>Glyma.18g195700.2 sequence-type=transcript locus=Glyma.18g195700 ID=Glyma.18g195700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
TGGTATCTTTTGATAGTGAGAATTTGAAACTCTTGCTCAATGTTGCTTGGATTTTGTGAAAATGGAGATTAattttgCTGATTTGGGGGATTGAGTTGGAAGGGGAAACATGgctgcttcttctgcatctctttctggtgcttctgcttcggatcttctgAGGAGTTCAACCAGCGGTTTCAATGGTGTTCCTTTGAGAACCATGGGGAAGGGAAAGTTGGTTTTGAAGAGGAGGAACTTTACAGTTGCTGCCAGGCTGAGGAAGGTGAAGAAGCATGAATATCCTTGGCCTCCTAACCCTGATCCCAATGTGAAAGGTGGGGTGCTGAGCCACCTTTCCTTGTTCAAGCCACTCAAGGAGAAGCCAAAGCCTGTCACTTTGGATTTTGAAAGGCCTCTTGTTGATCTGCAAAAGAAGATCATTGATGTACAGAAGATGGCGAACGAAACTGGACTGGACTTCAGTGATCAGATTCTCTCATTGGAGACCAAGTACCACCAGGCTTTAAAGGATCTGTATACGCATCTGACTCCTATTCAGCGGGTCAACATCGCACGGCACCCTAACAGGCCAACTTTCCTTGATCATGTGTTTAACATAACTGAAAAGTTTGTTGAACTCCATGGTGATCGGGCAGGTTACGATGATCCTGCTATTGTTACTGGTCTAGGGACTATAGATGGTAGAAGCTACATGTTCATTGGTCACCAAAAGGGTAGAAATACTAAAGAAAATATTCAGCGTAACTTTGGGATGCCAACTCCTCATGGTTACAGGAAGGCCCTTCGCTTGATGGAATATGCAGATCATCATGGGTTCCCCATAGTTACTTTCATTGACACGCCTGGGGCATATGCTGACCTTAAATCAGAGGAACTAGGACAGGGTGAAGCGATTGCTCACAATTTGAGATCCATGTTTGGTCTGAAGGTGCCAGTTATATCTATAGTTATTGGAGAAGGTGGTTCAGGTGGCGCCCTAGCCATTGGATGTGCTAATAAATTACTCATGCTTGAAAATGCTGTTTTTTATGTTGCCAGTCCAGAGGCATGTGCAGCAATCTTGTGGAAGACAGCTAAAGCTTCTCCAAAGGCTGCTGAGAAATTGAAGATTACAGCCACTGAACTGTGCAAATTACAAATTGCAGATGGTGTTATACCTGAGCCACTTGGTGGTGCACATGCAGATCCAGAGTGGACCTCTCAACAGATAAAAAAGGCTATCAAAGAAACCATGGATGAGCTCATGAAGATGAACACAGAAGAACTGTTAAAACATCGCATGCTTAAGTTCAGAAAGATTGGTGGATTCCAGGAAGGTATTCCTATAGATCCTAAGAGAAAAGCCAACATGAAGAAGAGGGATCTATCTATTGCTAAGATTCCTGATGCTGAACTAGAAGTTGAGGTTGAGAAACTGAAGCAACAGGTTTTGGAAGCTAAGGAATCTTCTCCTGTTCCTCCAAAACTAGATCTGGATGAGATGCTAAAGCAACTGGCAAGGGAGGTCGATCTAGAATACTCTGAGGCAGTTAAAGCCACGGGCTTGACAGACAGTTTGTTGAAACTAAGGGAGGAAGTTTCGAAAGCAAATGCAGATAATCAAATTGTTGATCCATTGCTGGAGGGTAAGATAGAAAAGCTAAGGGTGGAGTTTGAACAGCAATTGCGTGCAGCTCCCAATTATGGTAGGCTGCAGAATAAGCTTAACTATCTGAGCGAATTATGTAAAGTAAAGCTTCTGTCAGATGGAAAGAAGGACAATGAGGCTGTCACATTTAAGCAAGAGTTGAAGAAAAAAATTGATAATGCCTTGAGTGATCCAAAAATAAGGGAGACATTTGAAGCATTAAAGGCTGAAATTAAAGGTGTTGGTGCATCCTCAGCAAGTGATTTGGATGACGAGTTGAAGAAGAAAATCATTGAGTTTATCaaagaagtaaaagaagtaaaagaagtaaaagaggtaatagaaAATCAAATTGAAAGTTTGGTAAACTCGTCGGATGATATTAAGAGCAAGATACTGCAATTGAAATTGGAGGTTCCTAAGGCTGGAGAGACGCCTGATTCAGAACCAAAGAATAGAATTGGTGCTCTGGTGCAACTAATTAAGCCGAGCCTAGTGGAGGCCGTTGACTCGTCTGGCTTAAAAGATCTGTTTGAAAATCTGGTGTCTAATGATGGAAGTTTGACACATGAAGATCCAGCTAGAGACAGTCTCACCGATGACCAGTAGAGGGTGAAAGTTGGTGCAAACTGCACCATTTCTTAATAAATGCTGCTCATATGGTGCTGGCTGCAACAAGTTAATGAATGGAATAGTGAAAACTGCACCAGTGTGAGTGATCTTGATACATTACCATATCAGCTGGTTGTACATCATCTAGAATTATGGCCATACTTCTTAGGGACAAGTTTTGGTAATTTTAAGGAGATACCGTGTTAATGGTGACTAATATTTTTTTCTGTAATCTTCAAATAGAGGACCAGAAGGGGGAATAAAATTGAAAACCATGTTGTCTTTGTTTGAGTCACAATGTTGCAGTTATATTTTGAATGAttttttatgttttcttttcttttcatgttcattttggtcttttTTAATCATTTAAAATGTTCAATTTTTCCCTAAATAGACTTAGATGAACATTGTATAAATTGTTGAGTTTGAGGAACCGAGTAATAATATGACGCTTGGTACTGT
Coding sequences of Glyma.18g195700
>Glyma.18g195700.1 sequence-type=CDS polypeptide=Glyma.18g195700.1.p locus=Glyma.18g195700 ID=Glyma.18g195700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGCTTCTTCTGCATCTCTTTCTGGTGCTTCTGCTTCGGATCTTCTGAGGAGTTCAACCAGCGGTTTCAATGGTGTTCCTTTGAGAACCATGGGGAAGGGAAAGTTGGTTTTGAAGAGGAGGAACTTTACAGTTGCTGCCAGGCTGAGGAAGGTGAAGAAGCATGAATATCCTTGGCCTCCTAACCCTGATCCCAATGTGAAAGGTGGGGTGCTGAGCCACCTTTCCTTGTTCAAGCCACTCAAGGAGAAGCCAAAGCCTGTCACTTTGGATTTTGAAAGGCCTCTTGTTGATCTGCAAAAGAAGATCATTGATGTACAGAAGATGGCGAACGAAACTGGACTGGACTTCAGTGATCAGATTCTCTCATTGGAGACCAAGTACCACCAGGCTTTAAAGGATCTGTATACGCATCTGACTCCTATTCAGCGGGTCAACATCGCACGGCACCCTAACAGGCCAACTTTCCTTGATCATGTGTTTAACATAACTGAAAAGTTTGTTGAACTCCATGGTGATCGGGCAGGTTACGATGATCCTGCTATTGTTACTGGTCTAGGGACTATAGATGGTAGAAGCTACATGTTCATTGGTCACCAAAAGGGTAGAAATACTAAAGAAAATATTCAGCGTAACTTTGGGATGCCAACTCCTCATGGTTACAGGAAGGCCCTTCGCTTGATGGAATATGCAGATCATCATGGGTTCCCCATAGTTACTTTCATTGACACGCCTGGGGCATATGCTGACCTTAAATCAGAGGAACTAGGACAGGGTGAAGCGATTGCTCACAATTTGAGATCCATGTTTGGTCTGAAGGTGCCAGTTATATCTATAGTTATTGGAGAAGGTGGTTCAGGTGGCGCCCTAGCCATTGGATGTGCTAATAAATTACTCATGCTTGAAAATGCTGTTTTTTATGTTGCCAGTCCAGAGGCATGTGCAGCAATCTTGTGGAAGACAGCTAAAGCTTCTCCAAAGGCTGCTGAGAAATTGAAGATTACAGCCACTGAACTGTGCAAATTACAAATTGCAGATGGTGTTATACCTGAGCCACTTGGTGGTGCACATGCAGATCCAGAGTGGACCTCTCAACAGATAAAAAAGGCTATCAAAGAAACCATGGATGAGCTCATGAAGATGAACACAGAAGAACTGTTAAAACATCGCATGCTTAAGTTCAGAAAGATTGGTGGATTCCAGGAAGGTATTCCTATAGATCCTAAGAGAAAAGCCAACATGAAGAAGAGGGATCTATCTATTGCTAAGATTCCTGATGCTGAACTAGAAGTTGAGGTTGAGAAACTGAAGCAACAGGTTTTGGAAGCTAAGGAATCTTCTCCTGTTCCTCCAAAACTAGATCTGGATGAGATGCTAAAGCAACTGGCAAGGGAGGTCGATCTAGAATACTCTGAGGCAGTTAAAGCCACGGGCTTGACAGACAGTTTGTTGAAACTAAGGGAGGAAGTTTCGAAAGCAAATGCAGATAATCAAATTGTTGATCCATTGCTGGAGGGTAAGATAGAAAAGCTAAGGGTGGAGTTTGAACAGCAATTGCGTGCAGCTCCCAATTATGGTAGGCTGCAGAATAAGCTTAACTATCTGAGCGAATTATGTAAAGTAAAGCTTCTGTCAGATGGAAAGAAGGACAATGAGGCTGTCACATTTAAGCAAGAGTTGAAGAAAAAAATTGATAATGCCTTGAGTGATCCAAAAATAAGGGAGACATTTGAAGCATTAAAGGCTGAAATTAAAGGTGTTGGTGCATCCTCAGCAAGTGATTTGGATGACGAGTTGAAGAAGAAAATCATTGAGTTTATCAAAGAAGTAAAAGAAGTAAAAGAAGTAAAAGAGGTAATAGAAAATCAAATTGAAAGTTTGGTAAACTCGTCGGATGATATTAAGAGCAAGATACTGCAATTGAAATTGGAGGTTCCTAAGGCTGGAGAGACGCCTGATTCAGAACCAAAGAATAGAATTGGTGCTCTGGTGCAACTAATTAAGCCGAGCCTAGTGGAGGCCGTTGACTCGTCTGGCTTAAAAGATCTGTTTGAAAATCTGGTGTCTAATGATGGAAGTTTGACACATGAAGATCCAGCTAGAGACAGTCTCACCGATGACCAGTAG

>Glyma.18g195700.2 sequence-type=CDS polypeptide=Glyma.18g195700.2.p locus=Glyma.18g195700 ID=Glyma.18g195700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCTGCTTCTTCTGCATCTCTTTCTGGTGCTTCTGCTTCGGATCTTCTGAGGAGTTCAACCAGCGGTTTCAATGGTGTTCCTTTGAGAACCATGGGGAAGGGAAAGTTGGTTTTGAAGAGGAGGAACTTTACAGTTGCTGCCAGGCTGAGGAAGGTGAAGAAGCATGAATATCCTTGGCCTCCTAACCCTGATCCCAATGTGAAAGGTGGGGTGCTGAGCCACCTTTCCTTGTTCAAGCCACTCAAGGAGAAGCCAAAGCCTGTCACTTTGGATTTTGAAAGGCCTCTTGTTGATCTGCAAAAGAAGATCATTGATGTACAGAAGATGGCGAACGAAACTGGACTGGACTTCAGTGATCAGATTCTCTCATTGGAGACCAAGTACCACCAGGCTTTAAAGGATCTGTATACGCATCTGACTCCTATTCAGCGGGTCAACATCGCACGGCACCCTAACAGGCCAACTTTCCTTGATCATGTGTTTAACATAACTGAAAAGTTTGTTGAACTCCATGGTGATCGGGCAGGTTACGATGATCCTGCTATTGTTACTGGTCTAGGGACTATAGATGGTAGAAGCTACATGTTCATTGGTCACCAAAAGGGTAGAAATACTAAAGAAAATATTCAGCGTAACTTTGGGATGCCAACTCCTCATGGTTACAGGAAGGCCCTTCGCTTGATGGAATATGCAGATCATCATGGGTTCCCCATAGTTACTTTCATTGACACGCCTGGGGCATATGCTGACCTTAAATCAGAGGAACTAGGACAGGGTGAAGCGATTGCTCACAATTTGAGATCCATGTTTGGTCTGAAGGTGCCAGTTATATCTATAGTTATTGGAGAAGGTGGTTCAGGTGGCGCCCTAGCCATTGGATGTGCTAATAAATTACTCATGCTTGAAAATGCTGTTTTTTATGTTGCCAGTCCAGAGGCATGTGCAGCAATCTTGTGGAAGACAGCTAAAGCTTCTCCAAAGGCTGCTGAGAAATTGAAGATTACAGCCACTGAACTGTGCAAATTACAAATTGCAGATGGTGTTATACCTGAGCCACTTGGTGGTGCACATGCAGATCCAGAGTGGACCTCTCAACAGATAAAAAAGGCTATCAAAGAAACCATGGATGAGCTCATGAAGATGAACACAGAAGAACTGTTAAAACATCGCATGCTTAAGTTCAGAAAGATTGGTGGATTCCAGGAAGGTATTCCTATAGATCCTAAGAGAAAAGCCAACATGAAGAAGAGGGATCTATCTATTGCTAAGATTCCTGATGCTGAACTAGAAGTTGAGGTTGAGAAACTGAAGCAACAGGTTTTGGAAGCTAAGGAATCTTCTCCTGTTCCTCCAAAACTAGATCTGGATGAGATGCTAAAGCAACTGGCAAGGGAGGTCGATCTAGAATACTCTGAGGCAGTTAAAGCCACGGGCTTGACAGACAGTTTGTTGAAACTAAGGGAGGAAGTTTCGAAAGCAAATGCAGATAATCAAATTGTTGATCCATTGCTGGAGGGTAAGATAGAAAAGCTAAGGGTGGAGTTTGAACAGCAATTGCGTGCAGCTCCCAATTATGGTAGGCTGCAGAATAAGCTTAACTATCTGAGCGAATTATGTAAAGTAAAGCTTCTGTCAGATGGAAAGAAGGACAATGAGGCTGTCACATTTAAGCAAGAGTTGAAGAAAAAAATTGATAATGCCTTGAGTGATCCAAAAATAAGGGAGACATTTGAAGCATTAAAGGCTGAAATTAAAGGTGTTGGTGCATCCTCAGCAAGTGATTTGGATGACGAGTTGAAGAAGAAAATCATTGAGTTTATCAAAGAAGTAAAAGAAGTAAAAGAAGTAAAAGAGGTAATAGAAAATCAAATTGAAAGTTTGGTAAACTCGTCGGATGATATTAAGAGCAAGATACTGCAATTGAAATTGGAGGTTCCTAAGGCTGGAGAGACGCCTGATTCAGAACCAAAGAATAGAATTGGTGCTCTGGTGCAACTAATTAAGCCGAGCCTAGTGGAGGCCGTTGACTCGTCTGGCTTAAAAGATCTGTTTGAAAATCTGGTGTCTAATGATGGAAGTTTGACACATGAAGATCCAGCTAGAGACAGTCTCACCGATGACCAGTAG
Predicted protein sequences of Glyma.18g195700
>Glyma.18g195700.1.p sequence-type=predicted peptide transcript=Glyma.18g195700.1 locus=Glyma.18g195700 ID=Glyma.18g195700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAASSASLSGASASDLLRSSTSGFNGVPLRTMGKGKLVLKRRNFTVAARLRKVKKHEYPWPPNPDPNVKGGVLSHLSLFKPLKEKPKPVTLDFERPLVDLQKKIIDVQKMANETGLDFSDQILSLETKYHQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGLGTIDGRSYMFIGHQKGRNTKENIQRNFGMPTPHGYRKALRLMEYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKTAKASPKAAEKLKITATELCKLQIADGVIPEPLGGAHADPEWTSQQIKKAIKETMDELMKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELEVEVEKLKQQVLEAKESSPVPPKLDLDEMLKQLAREVDLEYSEAVKATGLTDSLLKLREEVSKANADNQIVDPLLEGKIEKLRVEFEQQLRAAPNYGRLQNKLNYLSELCKVKLLSDGKKDNEAVTFKQELKKKIDNALSDPKIRETFEALKAEIKGVGASSASDLDDELKKKIIEFIKEVKEVKEVKEVIENQIESLVNSSDDIKSKILQLKLEVPKAGETPDSEPKNRIGALVQLIKPSLVEAVDSSGLKDLFENLVSNDGSLTHEDPARDSLTDDQ*

>Glyma.18g195700.2.p sequence-type=predicted peptide transcript=Glyma.18g195700.2 locus=Glyma.18g195700 ID=Glyma.18g195700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAASSASLSGASASDLLRSSTSGFNGVPLRTMGKGKLVLKRRNFTVAARLRKVKKHEYPWPPNPDPNVKGGVLSHLSLFKPLKEKPKPVTLDFERPLVDLQKKIIDVQKMANETGLDFSDQILSLETKYHQALKDLYTHLTPIQRVNIARHPNRPTFLDHVFNITEKFVELHGDRAGYDDPAIVTGLGTIDGRSYMFIGHQKGRNTKENIQRNFGMPTPHGYRKALRLMEYADHHGFPIVTFIDTPGAYADLKSEELGQGEAIAHNLRSMFGLKVPVISIVIGEGGSGGALAIGCANKLLMLENAVFYVASPEACAAILWKTAKASPKAAEKLKITATELCKLQIADGVIPEPLGGAHADPEWTSQQIKKAIKETMDELMKMNTEELLKHRMLKFRKIGGFQEGIPIDPKRKANMKKRDLSIAKIPDAELEVEVEKLKQQVLEAKESSPVPPKLDLDEMLKQLAREVDLEYSEAVKATGLTDSLLKLREEVSKANADNQIVDPLLEGKIEKLRVEFEQQLRAAPNYGRLQNKLNYLSELCKVKLLSDGKKDNEAVTFKQELKKKIDNALSDPKIRETFEALKAEIKGVGASSASDLDDELKKKIIEFIKEVKEVKEVKEVIENQIESLVNSSDDIKSKILQLKLEVPKAGETPDSEPKNRIGALVQLIKPSLVEAVDSSGLKDLFENLVSNDGSLTHEDPARDSLTDDQ*






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