SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g181700

Feature Type:gene_model
Chromosome:Gm18
Start:44042287
stop:44047425
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g181700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G39700.1AT ATEXP4,ATEXPA4,ATHEXP ALPHA 1.6,EXPA4 JGI N/AIEA
PTHR31867PantherFam EXPANSIN-A15 JGI N/AIEA
PF01357Pfam Expansin C-terminal domain JGI N/AIEA
PF03330Pfam Lytic transglycolase JGI N/AIEA

Gene model name correspondences to Glyma.18g181700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g39850 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g181700
>Glyma.18g181700.1 sequence-type=CDS polypeptide=Glyma.18g181700.1.p locus=Glyma.18g181700 id=Glyma.18g181700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTGCTATTGTTTTCCTCCACATTGCATCATTGGCCTCTCTTTTTGTTGCAACAAGTGCAAGAATCCCTGGAGTTTACACCGGTGGCCCCTGGCAGAGTGCTCATGCCACCTTCTACGGTGGCAGTGATGCCTCTGGAACAATGGGTGGTGCTTGTGGGTACGGAAACCTGTACAGCCAAGGCTACGGAGTGAACACTGCGGCGCTGAGCACTGCCCTGTTCAACAACGGGCTGAGCTGCGGCGCGTGCTTCGAGATAAAGTGCGACCAGGATCCGCGGTGGTGCAACCCCGGGAGCCCATCGATCCTAATCACTGCGACCAACTTCTGCCCTCCGAACTTCGCCCTTCCGAACGACAATGGCGGATGGTGCAACCCTCCCCGCCCGCACTTCGACCTCGCCATGCCCATGTTCCTCAAGATCGCCCAGTACCGCGCCGGAATCGTCCCCGTCGCTTACCGCCGGGTGCCATGCAGAAAGACAGGGGGCATCAGATTCACAATCAACGGTTTCCGTTACTTCAACCTGGTGCTGATCACCAACGTCGCGGGTGCAGGGGATATCGTGCGCGTGAGCATGAAAGGAAGCAAAACCGCGTGGATGAGCATGAGCCGCAACTGGGGGCAAAACTGGCAATCCAACGCGGTTTTGGTGGGTCAGGCCCTCTCCTTTAGGGTTACCGGCAGTGACCAGCGCACGTCAACCTCCTGGAACGTGGCACCACCTAATTGGCAGTTCGGACAAACCTTCACAGGAAAGAATTTCCGTGTCTAA
Predicted protein sequences of Glyma.18g181700
>Glyma.18g181700.1.p sequence-type=predicted peptide transcript=Glyma.18g181700.1 locus=Glyma.18g181700 id=Glyma.18g181700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAAIVFLHIASLASLFVATSARIPGVYTGGPWQSAHATFYGGSDASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGACFEIKCDQDPRWCNPGSPSILITATNFCPPNFALPNDNGGWCNPPRPHFDLAMPMFLKIAQYRAGIVPVAYRRVPCRKTGGIRFTINGFRYFNLVLITNVAGAGDIVRVSMKGSKTAWMSMSRNWGQNWQSNAVLVGQALSFRVTGSDQRTSTSWNVAPPNWQFGQTFTGKNFRV*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo