SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g180400

Feature Type:gene_model
Chromosome:Gm18
Start:43714654
stop:43717800
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g180400
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G07630.1AT PLL5 JGI N/AIEA
3.1.3.16EC protein-serine/threonine phosphatase JGI N/AIEA
GO:0006470GO-bp protein dephosphorylation JGI N/AIEA
GO:0004722GO-mf protein serine/threonine phosphatase activity JGI N/AIEA
K01102KEGG Protein phosphatases and associated proteins JGI N/AIEA
KOG0700 KOG Protein phosphatase 2C/pyruvate dehydrogenase (lipoamide) phosphatase JGI N/AIEA
PTHR13832PantherFam PROTEIN PHOSPHATASE 2C JGI N/AIEA
PTHR13832:SF228PantherFam PROTEIN PHOSPHATASE 2C 4-RELATED JGI N/AIEA
PF13672Pfam Protein phosphatase 2C JGI N/AIEA

Gene model name correspondences to Glyma.18g180400 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g39640 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g180400
>Glyma.18g180400.1 sequence-type=CDS polypeptide=Glyma.18g180400.1.p locus=Glyma.18g180400 id=Glyma.18g180400.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTAATCGAATCAGTAATCTCTGCCTCTGTTCCTCCGGCGACGCCTCCAGGAGGTTCGAGAACAGAGCTTTCTTCCTCTCCAAGCAACACCAGAATTCCCTCGGAAACTCCATCTGCTACGTGAGACCTGACACGTGCCGGTTCTCCGTTGATGACATCACCCTCTTGACTTTCCGGTCAGTGTCCGGCGCCACCGTGAGTGCAAACACGTCGGCGACGCCTTCAACTTCGCTCGATGATTCACTCCAACACAGCGTAGTTTTGGATTCCTCTGCTTCATTTGAGAGCTCTGGTTCCTTCACTTCCACTTTAGTGCCTTTTCAGCATCAACATGCTCGTGGATTCTCCGTGGGAGGCTCTACAGAAAGAGGGTTGTATTGGGGTCTTCGTGATCGTGTGGTGAACGGTGAAGGGTCTATTGAGAAAGGTTATTCTGAGGTAGCAATGAAGAAGGGGAAAAGAAGTAAAAGAAATTTGAAAAAGGTTCTGAGTAGAGCGTTTTTAAGTATTGGGAGAAGATCAGTTTTGAAGAAAAATGATAACACTAATGCGAGAGTGAGTTGTAGTACTGGTTTGAGTTTGCAAGGTGCTGAGGGTGATAATGATAACTATTTGGATGGTGATGAGTGTGATGTGTTAATGGGGTGTGAGAATCTTCACTGGGCACAAGGGAGAGCTGGTGAGGATCGTGTGCATATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGTTTTAATGGCCCAGATGCCACTGATTTTCTTCTCAACAATTTGTTTTATGCTGTGAATGATGAGCTCAAGGAGATGTTGTGTGCTCACAACAAGTTTGAATCCATGGCTATGGATTCAGACTCTTTGGAGTTGGAGGAGAATGTGTTGTTATCAGGTAAGGGAAATGGAGGGGTTGATGGTGGTTGTTCTTCAAGTGAATATAAAGAAAACTATCCAATTGAAAATGAAGAGTTAAATTTGGAATGTGCATCAGAAGGAGAGGAGGGAATGAATGGGATAAATAGTCAAAAAGTGGATTTGAGTCACTCAGATGTGTTACAAGCTCTTTCAGAGGCATTGAGGAAGACAGAAGATGCATTTTTGAAGACTGTTGATGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCGTGTGTTTTGGTGATGTTGATGAAGGGTCAAGATGTTTACTTGATGAATGTGGGAGATAGTCGTGCAGTGTTGGCCACTCACACTGGGGAACCTCTTCAGCTCACCATGGACCATAGCACTCAAGTGAAAGAGGAGGTTTACAGAATCAGGAGGGAGCATCCTGATGACCCTTTAGCAATAACTAAAGGCCGGGTGAAGGGTCGCTTGAGTGTCACAAGGGCTTTTGGGGCTGGGTTCCTTAAGCAGCCTAAGCTAAACAATGCTGTGCTAGAGACTTTCAGAGTGACCTACATAGGGGAATCTCCATACATCACATGTTTCCCTTCACTCCACCACCACAAGCTCAGCACAAATGACAAGTTCCTCATACTATCTTCAGATGGACTTTACCAATACTTCACCAATGAAGAAGCTGCTGCCAAAGTAGAGTCATTCATCACCATGTTTCCTGATAGAGACCCTGCACAACTTCTCATTGAAGAAGCACTAGGTCGAGCAGCAAAAAAGGCTGGTATGGAGTTTCATGAGTTGCTTGATATTCCACAAGGGGAACGCCGTAATTACCATGATGACATTTCCATTGTCATAATCTCCATAGAGGGAAAAATATGGCGTTCATTGGTGTAA

>Glyma.18g180400.2 sequence-type=CDS polypeptide=Glyma.18g180400.2.p locus=Glyma.18g180400 id=Glyma.18g180400.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGGTAATCGAATCAGTAATCTCTGCCTCTGTTCCTCCGGCGACGCCTCCAGGAGGTTCGAGAACAGAGCTTTCTTCCTCTCCAAGCAACACCAGAATTCCCTCGGAAACTCCATCTGCTACGTGAGACCTGACACGTGCCGGTTCTCCGTTGATGACATCACCCTCTTGACTTTCCGGTCAGTGTCCGGCGCCACCGTGAGTGCAAACACGTCGGCGACGCCTTCAACTTCGCTCGATGATTCACTCCAACACAGCGTAGTTTTGGATTCCTCTGCTTCATTTGAGAGCTCTGGTTCCTTCACTTCCACTTTAGTGCCTTTTCAGCATCAACATGCTCGTGGATTCTCCGTGGGAGGCTCTACAGAAAGAGGGTTGTATTGGGGTCTTCGTGATCGTGTGGTGAACGGTGAAGGGTCTATTGAGAAAGGTTATTCTGAGGTAGCAATGAAGAAGGGGAAAAGAAGTAAAAGAAATTTGAAAAAGGTTCTGAGTAGAGCGTTTTTAAGTATTGGGAGAAGATCAGTTTTGAAGAAAAATGATAACACTAATGCGAGAGTGAGTTGTAGTACTGGTTTGAGTTTGCAAGGTGCTGAGGGTGATAATGATAACTATTTGGATGGTGATGAGTGTGATGTGTTAATGGGGTGTGAGAATCTTCACTGGGCACAAGGGAGAGCTGGTGAGGATCGTGTGCATATTGTGATTTGTGAGGATCATGGATGGGTTTTTGTGGGGATTTATGATGGTTTTAATGGCCCAGATGCCACTGATTTTCTTCTCAACAATTTGTTTTATGCTGTGAATGATGAGCTCAAGGAGATGTTGTGTGCTCACAACAAGTTTGAATCCATGGCTATGGATTCAGACTCTTTGGAGTTGGAGGAGAATGTGTTGTTATCAGGTAAGGGAAATGGAGGGGTTGATGGTGGTTGTTCTTCAAGTGAATATAAAGAAAACTATCCAATTGAAAATGAAGAGTTAAATTTGGAATGTGCATCAGAAGGAGAGGAGGGAATGAATGGGATAAATAGTCAAAAAGTGGATTTGAGTCACTCAGATGTGTTACAAGCTCTTTCAGAGGCATTGAGGAAGACAGAAGATGCATTTTTGAAGACTGTTGATGAGATGATTGGTCACAACCCTGTGTTGGCTATGATGGGTTCGTGTGTTTTGGTGATGTTGATGAAGGGTCAAGATGTTTACTTGATGAATGTGGGAGATAGTCGTGCAGTGTTGGCCACTCACACTGGGGAACCTCTTCAGCTCACCATGGACCATAGCACTCAAGTGAAAGAGGAGGTTTACAGAATCAGGAGGGAGCATCCTGATGACCCTTTAGCAATAACTAAAGGCCGGGTGAAGGGTCGCTTGAGTGTCACAAGGGCTTTTGGGGCTGGGTTCCTTAAGCAGCCTAAGCTAAACAATGCTGTGCTAGAGACTTTCAGAGTGACCTACATAGGGGAATCTCCATACATCACATGTTTCCCTTCACTCCACCACCACAAGCTCAGCACAAATGACAAGTTCCTCATACTATCTTCAGATGGACTTTACCAATACTTCACCAATGAAGAAGCTGCTGCCAAAGTAGAGTCATTCATCACCATGTTTCCTGATAGAGACCCTGCACAACTTCTCATTGAAGAAGCACTAGGTCGAGCAGCAAAAAAGGCTGGTACAAAACACTTTTTTCTCCTCAACTATGTTTCAACATGA
Predicted protein sequences of Glyma.18g180400
>Glyma.18g180400.1.p sequence-type=predicted peptide transcript=Glyma.18g180400.1 locus=Glyma.18g180400 id=Glyma.18g180400.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGNRISNLCLCSSGDASRRFENRAFFLSKQHQNSLGNSICYVRPDTCRFSVDDITLLTFRSVSGATVSANTSATPSTSLDDSLQHSVVLDSSASFESSGSFTSTLVPFQHQHARGFSVGGSTERGLYWGLRDRVVNGEGSIEKGYSEVAMKKGKRSKRNLKKVLSRAFLSIGRRSVLKKNDNTNARVSCSTGLSLQGAEGDNDNYLDGDECDVLMGCENLHWAQGRAGEDRVHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYAVNDELKEMLCAHNKFESMAMDSDSLELEENVLLSGKGNGGVDGGCSSSEYKENYPIENEELNLECASEGEEGMNGINSQKVDLSHSDVLQALSEALRKTEDAFLKTVDEMIGHNPVLAMMGSCVLVMLMKGQDVYLMNVGDSRAVLATHTGEPLQLTMDHSTQVKEEVYRIRREHPDDPLAITKGRVKGRLSVTRAFGAGFLKQPKLNNAVLETFRVTYIGESPYITCFPSLHHHKLSTNDKFLILSSDGLYQYFTNEEAAAKVESFITMFPDRDPAQLLIEEALGRAAKKAGMEFHELLDIPQGERRNYHDDISIVIISIEGKIWRSLV*

>Glyma.18g180400.2.p sequence-type=predicted peptide transcript=Glyma.18g180400.2 locus=Glyma.18g180400 id=Glyma.18g180400.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MGNRISNLCLCSSGDASRRFENRAFFLSKQHQNSLGNSICYVRPDTCRFSVDDITLLTFRSVSGATVSANTSATPSTSLDDSLQHSVVLDSSASFESSGSFTSTLVPFQHQHARGFSVGGSTERGLYWGLRDRVVNGEGSIEKGYSEVAMKKGKRSKRNLKKVLSRAFLSIGRRSVLKKNDNTNARVSCSTGLSLQGAEGDNDNYLDGDECDVLMGCENLHWAQGRAGEDRVHIVICEDHGWVFVGIYDGFNGPDATDFLLNNLFYAVNDELKEMLCAHNKFESMAMDSDSLELEENVLLSGKGNGGVDGGCSSSEYKENYPIENEELNLECASEGEEGMNGINSQKVDLSHSDVLQALSEALRKTEDAFLKTVDEMIGHNPVLAMMGSCVLVMLMKGQDVYLMNVGDSRAVLATHTGEPLQLTMDHSTQVKEEVYRIRREHPDDPLAITKGRVKGRLSVTRAFGAGFLKQPKLNNAVLETFRVTYIGESPYITCFPSLHHHKLSTNDKFLILSSDGLYQYFTNEEAAAKVESFITMFPDRDPAQLLIEEALGRAAKKAGTKHFFLLNYVST*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo