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Report for Sequence Feature Glyma.18g175300

Feature Type:gene_model
Chromosome:Gm18
Start:41975526
stop:41982513
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g175300
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G07010.1AT JGI N/AIEA
4.2.2.2EC pectate lyase JGI N/AIEA
K01728KEGG Quorum sensing JGI N/AIEA
PTHR31683PantherFam PECTATE LYASE 18-RELATED JGI N/AIEA
PF00544Pfam Pectate lyase JGI N/AIEA

Gene model name correspondences to Glyma.18g175300 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g38430 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g175300
>Glyma.18g175300.1 sequence-type=CDS polypeptide=Glyma.18g175300.1.p locus=Glyma.18g175300 id=Glyma.18g175300.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGAAGGTGCTGTCTCCAAAATTGTTCACTCTCAGTATTCTGCTCGCGGCGCTGGTTTTAGCTTCCGCCAACGCAGTCAGCGGCAATGAGATGCAGAAACATGAAGCCACGGAATCAAGGGATGTGGTTGAAGAAGAGAAGTTGCAAGTGCAGAGCTTGAAGAATTCGTCAATGGCAGAAAGGTCAGGGAGTGCTTTGAATGAACATGCAGTTGATAATCCAGAGGAGATTGCTTCCATGGTTGATGAGAGCATACGCAACTACACGGCTCGAAGGAACCTGAACTTCTTCTCATGCGGGTCCGGGAACCCAATCGACGACTGCTGGCGGTGCGACAAGCGGTGGTACGCCCGCCGCAAGCGCCTAGCCAACTGCGGCATCGGTTTCGGCCGCAACGCCATCGGCGGCCGCGACGGGCGCTACTACGTCGTGTCGGACCCCGGCGACGACGACCCAGTCAACCCGAAACCCGGCACCCTCCGGCACGCCGTGATCCAGGACCGCCCCCTCTGGATCGTGTTCAAGCGCGACATGGTCATAACCTTAAAGCAAGAACTCATCATGAACAGCTTCAAGACCATCGACGGCCGCGGCGTGAACGTCCACATCGCTTATGGTGCGTGCATCACCATACAGTTCGTCACCAACGTGATCATCCATGGGTTGCATATTCATGACTGCAAGGTGACTGGGAACGCCATGGTTCGGAGCTCTCCTTCGCATTATGGTTGGAGGACCCTTGCTGATGGAGATGGGATCTCCATCTTTGGCTCGAGTCATATTTGGATTGATCATAACTCGCTGTCGAATTGCGCTGATGGGCTTGTGGATGCTGTTATGGGGTCCACTGCTATTACTATTTCCAACAACTACTTCACCCACCACAACGAGGTTATGCTACTGGGTCACAGTGACTCTTATGTCCGCGACAAGCAGATGCAAGTAACCATTGCTTACAACCATTTTGGGGAGGGACTTATCCAAAGAATGCCCAGGTGCAGGCATGGGTATTTCCACGTGGTTAACAACGACTATACCCACTGGGTAATGTATGCAATTGGAGGCAGTGCTAACCCCACAATTAATAGCCAGGGCAACAGATACCTCGCCCCTCTGAACCCTTTTGCTAAAGAGGTGACAAAGAGAGTGGACACGGGGTCATCCGTATGGAAAAGTTGGAATTGGAGATCTGAAGGAGACCTTTTGCTCAATGGAGCCTTTTTCACTTCATCAGGAGCAGGAGCTGCAGCAAGCTATGCCAGAGCCTCAAGTTTGGGGGCAAAATCGTCTTCTTTGGTTGGTACCATCACCTCTGGAGCTGGTGTTCTTAACTGCCGCAGGGGTGCCATGTGTTAA
Predicted protein sequences of Glyma.18g175300
>Glyma.18g175300.1.p sequence-type=predicted peptide transcript=Glyma.18g175300.1 locus=Glyma.18g175300 id=Glyma.18g175300.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MKVLSPKLFTLSILLAALVLASANAVSGNEMQKHEATESRDVVEEEKLQVQSLKNSSMAERSGSALNEHAVDNPEEIASMVDESIRNYTARRNLNFFSCGSGNPIDDCWRCDKRWYARRKRLANCGIGFGRNAIGGRDGRYYVVSDPGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITLKQELIMNSFKTIDGRGVNVHIAYGACITIQFVTNVIIHGLHIHDCKVTGNAMVRSSPSHYGWRTLADGDGISIFGSSHIWIDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLGHSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWVMYAIGGSANPTINSQGNRYLAPLNPFAKEVTKRVDTGSSVWKSWNWRSEGDLLLNGAFFTSSGAGAAASYARASSLGAKSSSLVGTITSGAGVLNCRRGAMC*






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