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Report for Sequence Feature Glyma.18g172800

Feature Type:gene_model
Chromosome:Gm18
Start:41413322
stop:41417142
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g172800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT5G48850.1AT ATSDI1 JGI N/AIEA
GO:0005515GO-mf protein binding JGI N/AIEA
PTHR36326PantherFam PROTEIN POLLENLESS 3-LIKE 2 JGI N/AIEA
PF00515Pfam Tetratricopeptide repeat JGI N/AIEA
PF07719Pfam Tetratricopeptide repeat JGI N/AIEA

Gene model name correspondences to Glyma.18g172800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g38060 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g172800
>Glyma.18g172800.1 sequence-type=CDS polypeptide=Glyma.18g172800.1.p locus=Glyma.18g172800 id=Glyma.18g172800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGGAATTAATGTGTGCAAGAAGAGTTCAAAGTTAGGAAAGAAAGATGACCTCTATCATGTTATTCATAAGGTGCCTTATGGAGATAGCCCTTATGTCAAAGCCAAGCATGCTCAGTTGGTTGATAAGGACCCTGAAGCAGCTATAGTATTGTTTTGGAAGGCAATAAATGCTGGGGATAAAGTGGACAGTGCCCTGAAGGACATGGCTGTTGTGATGAAGCAGTTAGATAGATCTGAAGAAGCAATTGAAGCCATCAAATCTTTTAGAGGCCTTTGTTCCAAACACTCACAAGAGTCACTTGATAATGTTCTTCTTGACCTTTACAAGAAGTGTGGAAAAATAGAGGAGCAAATTGAATTGTTAAAGAGAAAGCTAAGATTAATTTACCAAGGAGAGGCCTTTAATGGAAGGACCACGAGGACTGCTCGCTCTCATGGCAAGAAGTTCCAAGTCTCCATCAAGCAAGAAACTGCAAGATTATTGGGAAACTTGGGTTGGGCCTACATGCAAAAGGAAAACTACATGATGGCTGAGGTTGTGTTCAAGAAAGCACAGATGGTAGATGCTGATGCCAACAAGGCTTGCAACTTGGGCTTATGCCTCATGAGACAATGTCGTTATGAGGAAGCCTATTACATTCTAGAAGAAGTGTTACAGGGAAAACATCAAGGGTCTGATGAAATCAAATCAAGAAAAAGAGCTGAGGAATTGCTTGAAGAGTTGAATGCAAATCTCCCCCAACCTGAGTTTATGGCTGATTTGGACCTTGACGATGATTTTGTGAAAGGGATAGATGACATGCTAGATGCATGGAACACAAATAGATCAAGAAGGCTTCCAATCTTTGAGGAAATCTCTTCCTTTAGAGATCAATTGGCATGTTAA

>Glyma.18g172800.5 sequence-type=CDS polypeptide=Glyma.18g172800.5.p locus=Glyma.18g172800 id=Glyma.18g172800.5.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGAAGGAATTAATGTGTGCAAGAAGAGTTCAAAGTTAGGAAAGAAAGATGACCTCTATCATGTTATTCATAAGGTGCCTTATGGAGATAGCCCTTATGTCAAAGCCAAGCATGCTCAGTTGGTTGATAAGGACCCTGAAGCAGCTATAGTATTGTTTTGGAAGGCAATAAATGCTGGGGATAAAGTGGACAGTGCCCTGAAGGACATGGCTGTTGTGATGAAGCAGTTAGATAGATCTGAAGAAGCAATTGAAGCCATCAAATCTTTTAGAGGCCTTTGTTCCAAACACTCACAAGAGTCACTTGATAATGTTCTTCTTGACCTTTACAAGGGAAACTTGGGTTGGGCCTACATGCAAAAGGAAAACTACATGATGGCTGAGGTTGTGTTCAAGAAAGCACAGATGGTAGATGCTGATGCCAACAAGGCTTGCAACTTGGGCTTATGCCTCATGAGACAATGTCGTTATGAGGAAGCCTATTACATTCTAGAAGAAGTGTTACAGGGAAAACATCAAGGGTCTGATGAAATCAAATCAAGAAAAAGAGCTGAGGAATTGCTTGAAGAGTTGAATGCAAATCTCCCCCAACCTGAGTTTATGGCTGATTTGGACCTTGACGATGATTTTGTGAAAGGGATAGATGACATGCTAGATGCATGGAACACAAATAGATCAAGAAGGCTTCCAATCTTTGAGGAAATCTCTTCCTTTAGAGATCAATTGGCATGTTAA
Predicted protein sequences of Glyma.18g172800
>Glyma.18g172800.1.p sequence-type=predicted peptide transcript=Glyma.18g172800.1 locus=Glyma.18g172800 id=Glyma.18g172800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEGINVCKKSSKLGKKDDLYHVIHKVPYGDSPYVKAKHAQLVDKDPEAAIVLFWKAINAGDKVDSALKDMAVVMKQLDRSEEAIEAIKSFRGLCSKHSQESLDNVLLDLYKKCGKIEEQIELLKRKLRLIYQGEAFNGRTTRTARSHGKKFQVSIKQETARLLGNLGWAYMQKENYMMAEVVFKKAQMVDADANKACNLGLCLMRQCRYEEAYYILEEVLQGKHQGSDEIKSRKRAEELLEELNANLPQPEFMADLDLDDDFVKGIDDMLDAWNTNRSRRLPIFEEISSFRDQLAC*

>Glyma.18g172800.5.p sequence-type=predicted peptide transcript=Glyma.18g172800.5 locus=Glyma.18g172800 id=Glyma.18g172800.5.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MEGINVCKKSSKLGKKDDLYHVIHKVPYGDSPYVKAKHAQLVDKDPEAAIVLFWKAINAGDKVDSALKDMAVVMKQLDRSEEAIEAIKSFRGLCSKHSQESLDNVLLDLYKGNLGWAYMQKENYMMAEVVFKKAQMVDADANKACNLGLCLMRQCRYEEAYYILEEVLQGKHQGSDEIKSRKRAEELLEELNANLPQPEFMADLDLDDDFVKGIDDMLDAWNTNRSRRLPIFEEISSFRDQLAC*






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