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Report for Sequence Feature Glyma.18g166800

Feature Type:gene_model
Chromosome:Gm18
Start:38804505
stop:38809622
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g166800
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G25070.1AT RIN4 JGI N/AIEA
K13456KEGG Plant-pathogen interaction JGI N/AIEA
PTHR33159PantherFam RPM1-INTERACTING PROTEIN 4 (RIN4) FAMILY PROTEIN JGI N/AIEA
PTHR33159:SF6PantherFam RPM1-INTERACTING PROTEIN 4 JGI N/AIEA
PF05627Pfam Cleavage site for pathogenic type III effector avirulence factor Avr JGI N/AIEA

Proteins Associated with Glyma.18g166800
LocusGene SymbolProtein Name
RIN4c RIN4c protein

Gene model name correspondences to Glyma.18g166800 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g36000 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g166800
>Glyma.18g166800.1 sequence-type=CDS polypeptide=Glyma.18g166800.1.p locus=Glyma.18g166800 id=Glyma.18g166800.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCTCAACGTTCTAATGTTCCAATGTTAGGCAAGAGTGAAGAGAATGTTTCAGATACAGCTCATTCTGACAAAGCCCAGAAAGGTCAGCCAGGTTCAAAGATGATTAATCCAAATGACACCAAGGAAAATTCAGATGTAGTTTCTTCTGCTGGCCTACCCCATTCAAAACCCAGAGTTCATTCAGAGGATCCATCTGGAAAGGGATCAGTGAGATCAATACATGAGTTACAAATGAGTAGGGAGGATGGTGATCCTAAACAATTTACTGACTCTCCAGCTCGCCATGGTGGCAGTGATTCTGCCTATCGAGGTCACGGAGTAGGTTCTGCTGACAACCGTAAAAGACCTTCAAGACAAAGTACTGGGTCTGAGCACAGCATTGACCGTTCACCCCTTCATCGCCAGGCAAAGACCCCTGGAAGAGATAGTCCTTCTTGGGAAGGAAAAAATTCATATGACAGTAGCCATGGTACCCCAGGAAGGTCCCGATTAAGACCACCTAACCGAGGGGATGAAACTCCTGATAAAGGTGCTGCTGTTCCAAAGTTTGGTGAGTGGGATGAGAGCAACCCTGCATCGGCTGATGGCTACACTCACATTTTCAACAAAGTGCGGGAGGAGAAACAGGTGGGGGCTGGACACGTGCCAGTTACGCCTAATGGGAGACAATATGCTGCTCGGAACCAACCTGCCGACGACAAAGCTCAGAGTTGCTGCTTTTGCTGGGGCAAAAAATGA
Predicted protein sequences of Glyma.18g166800
>Glyma.18g166800.1.p sequence-type=predicted peptide transcript=Glyma.18g166800.1 locus=Glyma.18g166800 id=Glyma.18g166800.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAQRSNVPMLGKSEENVSDTAHSDKAQKGQPGSKMINPNDTKENSDVVSSAGLPHSKPRVHSEDPSGKGSVRSIHELQMSREDGDPKQFTDSPARHGGSDSAYRGHGVGSADNRKRPSRQSTGSEHSIDRSPLHRQAKTPGRDSPSWEGKNSYDSSHGTPGRSRLRPPNRGDETPDKGAAVPKFGEWDESNPASADGYTHIFNKVREEKQVGAGHVPVTPNGRQYAARNQPADDKAQSCCFCWGKK*






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