Glyma.18g134600

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Report for Sequence Feature Glyma.18g134600

Feature Type:	gene_model
Chromosome:	Gm18
Start:	19347357
stop:	19349861
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.18g134600

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G16790.1	AT	P-loop containing nucleoside triphosphate hydrolases superfamily protein	JGI	N/A	IEA
AT2G16790.2	AT	P-loop containing nucleoside triphosphate hydrolases superfamily protein	JGI	N/A	IEA
GO:0005975	GO-bp	carbohydrate metabolic process	EnsemblGenomes	N/A	IEA
GO:0016310	GO-bp	phosphorylation	EnsemblGenomes	N/A	IEA
GO:0046177	GO-bp	D-gluconate catabolic process	EnsemblGenomes	N/A	IEA
GO:0000166	GO-mf	nucleotide binding	EnsemblGenomes	N/A	IEA
GO:0005524	GO-mf	ATP binding	EnsemblGenomes	N/A	IEA
GO:0016301	GO-mf	kinase activity	EnsemblGenomes	N/A	IEA
GO:0016740	GO-mf	transferase activity	EnsemblGenomes	N/A	IEA
GO:0046316	GO-mf	gluconokinase activity	EnsemblGenomes	N/A	IEA
KOG3354	KOG	Gluconate kinase	JGI	N/A	IEA
PTHR24220	Panther	FAMILY NOT NAMED	JGI	N/A	IEA
PTHR24220:SF77	Panther		JGI	N/A	IEA
PF01202	PFAM	Shikimate kinase	JGI	N/A	IEA
PWY-5530	SoyCyc9	sorbitol biosynthesis II	Plant Metabolic Network		ISS
GN7V-60001	SoyCyc9-rxn	gluconokinase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.18g134600

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g134600 not represented in the dataset	Glyma.18g134600 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.18g134600

Paralog	Evidence	Comments
Glyma.08g289900	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.18g134600 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma18g18210	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.18g134600

Limit To All Plant Sequences

>Glyma.18g134600.2 sequence-type=transcript locus=Glyma.18g134600 ID=Glyma.18g134600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTAAGATTGGTCGGATTGTTAAGAAATAAGGAAAAAAAAGAAAAGGTTCTCTCAATTTTTCAGGTTCCAAAAGTCAATATACAATTTCTGATCTCTGCGTTCCAATCTAATTGATCAATATGCCTTCAAACGATGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGATAAATTGGGATCATTATTTCAGGTTTCAAATATAGTTTGTACAAATAAATGGAAGAATGGGATTATGCATGAAAGAAAGGTTGAAGGGAATGGTTCAGAGTATGATAACCAATAGTAAAAAAGGAGCAAGCTGTAAATATGAATTTTTAACATTCCCTGGATTGATTCATGCCATTCTATTTCTTTTTCACCATATGATGTATATATAGAAAATTGCATGTCTCAATAGACCATTGTTTTGTAACTGAATTTTTTCTTATTATCATTTAATTAAACTTTAATGATGTGGCGATTGAACACGTATCGAGTTGGAACATATCATGTATTGTCCAATCTAAAGCACCAAATAATTTGAGTT

>Glyma.18g134600.3 sequence-type=transcript locus=Glyma.18g134600 ID=Glyma.18g134600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTAAGATTGGTCGGATTGTTAAGAAATAAGGAAAAAAAAGAAAAGGTTCCAAAAGTCAATATACAATTTCTGATCTCTGCGTTCCAATCTAATTGATCAATATGCCTTCAAACGATGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGATAAATTGGGATCATTATTTCAGGTTTCAAATATAGTTTGTACAAATAAATGGAAGAATGGGATTATGCATGAAAGAAAGGTTGAAGGGAATGGTTCAGAGTATGATAACCAATAGTAAAAAAGGAGCAAGCTGTAAATATGAATTTTTAACATTCCCTGGATTGATTCATGCCATTCTATTTCTTTTTCACCATATGATGTATATATAGAAAATTGCATGTCTCAATAGACCATTGTTTTGTAACTGAATTTTTTCTTATTATCATTTAATTAAACTTTAATGATGTGGCGATTGAACACGTATCGAGTTGGAACATATCATGTATTGTCCAATCTAAAGCACCAAATAATTTGAGTT

>Glyma.18g134600.4 sequence-type=transcript locus=Glyma.18g134600 ID=Glyma.18g134600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATTTCATTGTCTTCGTGCATATGATATAATATAATATCTATGTACTTTTCAAGGTTCTCTCAATTTTTCAGGTTCCAAAAGTCAATATACAATTTCTGATCTCTGCGTTCCAATCTAATTGATCAATATGCCTTCAAACGATGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGATAAATTGGGATCATTATTTCAGGTTTCAAATATAGTTTGTACAAATAAATGGAAGAATGGGATTATGCATGAAAGAAAGGTTGAAGGGAATGGTTCAGAGTATGATAACCAATAGTAAAAAAGGAGCAAGCTGTAAATATGAATTTTTAACATTCCCTGGATTGATTCATGCCATTCTATTTCTTTTTCACCATATGATGTATATATAGAAAATTGCATGTCTCAATAGACCATTGTTTTGTAACTGAATTTTTTCTTATTATCATTTAATTAAACTTTAATGATGTGGCGATTGAACACGTATCGAGTTGGAACATATCATGTATTGTCCAATCTAAAGCACCAAATAATTTGAGTT

>Glyma.18g134600.5 sequence-type=transcript locus=Glyma.18g134600 ID=Glyma.18g134600.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
acatacatatatatatatatatatatatatatatatatTGAAAAAGGATGATCCTTGTTAAATATGGCTTATGCAAGTCATTGCTTGATATGTGGGACATTTAATCAATTTCAAGCTGTTGAACGACACTGCTTGGTTAAGATTTTTTGTTGTAAAACTTATCTAATGGATATTTATTCAACAGCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGATAAATTGGGATCATTATTTCAGGTTTCAAATATAGTTTGTACAAATAAATGGAAGAATGGGATTATGCATGAAAGAAAGGTTGAAGGGAATGGTTCAGAGTATGATAACCAATAGTAAAAAAGGAGCAAGCTGTAAATATGAATTTTTAACATTCCCTGGATTGATTCATGCCATTCTATTTCTTTTTCACCATATGATGTATATATAGAAAATTGCATGTCTCAATAGACCATTGTTTTGTAACTGAATTTTTTCTTATTATCATTTAATTAAACTTTAATGATGTGGCGATTGAACACGTATCGAGTTGGAACATATCATGTATTGTCCAATCTAAAGCACCAAATAATTTGAGTT

Coding sequences of Glyma.18g134600

Limit To All Plant Sequences

>Glyma.18g134600.1 sequence-type=CDS polypeptide=Glyma.18g134600.1.p locus=Glyma.18g134600 ID=Glyma.18g134600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGTTTTGCTTCATTTTTTGTGTATCAATTAAATTCATATCTGAAACCGAAAACATCACAGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGA

>Glyma.18g134600.2 sequence-type=CDS polypeptide=Glyma.18g134600.2.p locus=Glyma.18g134600 ID=Glyma.18g134600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTTCAAACGATGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGA

>Glyma.18g134600.3 sequence-type=CDS polypeptide=Glyma.18g134600.3.p locus=Glyma.18g134600 ID=Glyma.18g134600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTTCAAACGATGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGA

>Glyma.18g134600.4 sequence-type=CDS polypeptide=Glyma.18g134600.4.p locus=Glyma.18g134600 ID=Glyma.18g134600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCCTTCAAACGATGGTGTAGTTATCGTGGTCATGGGTGTCAGCGGTGCTGGAAAAACCACAATAGGTCGGAAGCTGGAAAAAGAGTCGAAATATAAGTATCTTGATGCTGATGATTTTCACTCAGAATCAAACAAAGAAAAGATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGA

>Glyma.18g134600.5 sequence-type=CDS polypeptide=Glyma.18g134600.5.p locus=Glyma.18g134600 ID=Glyma.18g134600.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGCGTATGGGAATCCCACTTACAGATGAAGATCGGATGCCATGGTTTGAATCGCTACGCGATGCCATAAAAGAATACTTAAATAACAAAAAGGGTCTGATTCTTGGCTGTTCTGCTTTGAAGAAGGAATATAGAGAAATTCTTAGATCAGGTGACCTTAGTTATAAATGGGGGACTTATGCAAGTGCTGTCAACTTCATTCTGTTGGATGCTCCTGCTGAAGTGCTGAGTGTTCGAGTAAATAAGAGAGCTGCAGAAGGAAAACATTATATGCCTGCATCTCTTCTGCAATCACAGTTAGATTTGCTTGAGATTGATGAGTCTGAGGGAGTACTTAGAGTTGACGCTACTTTGAGACCCCAAGCCATTGTAAACACCATTCTAAACATGAACCAGTTTCAGGGATGTTTCAATGTTGATTTTGTGGAGCCTCATTGA

Predicted protein sequences of Glyma.18g134600

Limit To All Plant Sequences

>Glyma.18g134600.1.p sequence-type=predicted peptide transcript=Glyma.18g134600.1 locus=Glyma.18g134600 ID=Glyma.18g134600.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MFCFIFCVSIKFISETENITGVVIVVMGVSGAGKTTIGRKLEKESKYKYLDADDFHSESNKEKMRMGIPLTDEDRMPWFESLRDAIKEYLNNKKGLILGCSALKKEYREILRSGDLSYKWGTYASAVNFILLDAPAEVLSVRVNKRAAEGKHYMPASLLQSQLDLLEIDESEGVLRVDATLRPQAIVNTILNMNQFQGCFNVDFVEPH*

>Glyma.18g134600.2.p sequence-type=predicted peptide transcript=Glyma.18g134600.2 locus=Glyma.18g134600 ID=Glyma.18g134600.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPSNDGVVIVVMGVSGAGKTTIGRKLEKESKYKYLDADDFHSESNKEKMRMGIPLTDEDRMPWFESLRDAIKEYLNNKKGLILGCSALKKEYREILRSGDLSYKWGTYASAVNFILLDAPAEVLSVRVNKRAAEGKHYMPASLLQSQLDLLEIDESEGVLRVDATLRPQAIVNTILNMNQFQGCFNVDFVEPH*

>Glyma.18g134600.3.p sequence-type=predicted peptide transcript=Glyma.18g134600.3 locus=Glyma.18g134600 ID=Glyma.18g134600.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPSNDGVVIVVMGVSGAGKTTIGRKLEKESKYKYLDADDFHSESNKEKMRMGIPLTDEDRMPWFESLRDAIKEYLNNKKGLILGCSALKKEYREILRSGDLSYKWGTYASAVNFILLDAPAEVLSVRVNKRAAEGKHYMPASLLQSQLDLLEIDESEGVLRVDATLRPQAIVNTILNMNQFQGCFNVDFVEPH*

>Glyma.18g134600.4.p sequence-type=predicted peptide transcript=Glyma.18g134600.4 locus=Glyma.18g134600 ID=Glyma.18g134600.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MPSNDGVVIVVMGVSGAGKTTIGRKLEKESKYKYLDADDFHSESNKEKMRMGIPLTDEDRMPWFESLRDAIKEYLNNKKGLILGCSALKKEYREILRSGDLSYKWGTYASAVNFILLDAPAEVLSVRVNKRAAEGKHYMPASLLQSQLDLLEIDESEGVLRVDATLRPQAIVNTILNMNQFQGCFNVDFVEPH*

>Glyma.18g134600.5.p sequence-type=predicted peptide transcript=Glyma.18g134600.5 locus=Glyma.18g134600 ID=Glyma.18g134600.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
MRMGIPLTDEDRMPWFESLRDAIKEYLNNKKGLILGCSALKKEYREILRSGDLSYKWGTYASAVNFILLDAPAEVLSVRVNKRAAEGKHYMPASLLQSQLDLLEIDESEGVLRVDATLRPQAIVNTILNMNQFQGCFNVDFVEPH*

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