Glyma.18g125700

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Report for Sequence Feature Glyma.18g125700

Feature Type:	gene_model
Chromosome:	Gm18
Start:	16454203
stop:	16459099
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.18g125700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G26665.1	AT	Mediator complex, subunit Med10	JGI	N/A	IEA
GO:0006351	GO-bp	transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006355	GO-bp	regulation of transcription, DNA-templated	EnsemblGenomes	N/A	IEA
GO:0006357	GO-bp	regulation of transcription by RNA polymerase II	EnsemblGenomes	N/A	IEA
GO:0006357	GO-bp	regulation of transcription from RNA polymerase II promoter	JGI	N/A	IEA
GO:0005634	GO-cc	nucleus	EnsemblGenomes	N/A	IEA
GO:0016592	GO-cc	mediator complex	EnsemblGenomes	N/A	IEA
GO:0016592	GO-cc	mediator complex	JGI	N/A	IEA
GO:0070847	GO-cc	core mediator complex	EnsemblGenomes	N/A	IEA
GO:0003712	GO-mf	transcription cofactor activity	EnsemblGenomes	N/A	IEA
KOG3046	KOG	Transcription factor, subunit of SRB subcomplex of RNA polymerase II	JGI	N/A	IEA
PTHR13345	Panther	NUT2 AND UXT	JGI	N/A	IEA
PTHR13345:SF2	Panther	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 10	JGI	N/A	IEA
PF09748	PFAM	Transcription factor subunit Med10 of Mediator complex	JGI	N/A	IEA

Proteins Associated with Glyma.18g125700

Locus	Gene Symbol	Protein Name
	MED10-2	Mediator Complex 10 gene 2

Expression Patterns of Glyma.18g125700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g125700 not represented in the dataset	Glyma.18g125700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.18g125700

Paralog	Evidence	Comments
Glyma.08g296500	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.18g125700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma18g16280	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.18g125700

Limit To All Plant Sequences

>Glyma.18g125700.2 sequence-type=transcript locus=Glyma.18g125700 ID=Glyma.18g125700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTGTTCCGCAGGTGAGGAAGGATTTCCCCGACTTCACCTTAGCTATCGCCGAAAACCCGTACCTTCATATAAACATATATATATCTGATACTCTCACGTTTCACGCGTCCTTCTCCCACCGCACCCCACACTTCCGGCACCGTCGGAACTCAGCACCGCACATCTGCACCCCACACTCGTCTTCTCACAACCGTCAATCGCAGTCACAGCGCACAGCTTCGAGTTCAGAGGTCCCCCCCTTCACTGCAACGTTTTCACCTTGATTTCTTCAGAAAAATACTAATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGAGTGATATATTTCTTGTGTCTTCTAGCGTTTATGTATGCACTGTATAGTGGAGTTCAGCACTGTTCCTTGTTTCTGCATGTTGGTTAAATGCTGTAAATTTGATGACTAATTTTTGCTTACTATTAATTACTTAATTTGGCTTGTTGCTATTTTTTGAGTGTGCATGTTTCAATGAGAGGTTGAGGTGCCGGGGAAGTGG

>Glyma.18g125700.3 sequence-type=transcript locus=Glyma.18g125700 ID=Glyma.18g125700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTGTTCCGCAGGTGAGGAAGGATTTCCCCGACTTCACCTTAGCTATCGCCGAAAACCCGTACCTTCATATAAACATATATATATCTGATACTCTCACGTTTCACGCGTCCTTCTCCCACCGCACCCCACACTTCCGGCACCGTCGGAACTCAGCACCGCACATCTGCACCCCACACTCGTCTTCTCACAACCGTCAATCGCAGTCACAGCGCACAGCTTCGAGTTCAGAGGTCCCCCCCTTCACTGCAACGTTTTCACCTTGATTTCTTCAGaatagcggcggttatcctctatcctgctatattggtttttcggtcggctgctatgtgccgctactCAAGATTCAAAACATTCTGCTCTAGTTCTCTCTCACAAGCTTTCTCCAGCTTTGCAACTAGCTTTGTCTGACTCTGGCATATATTTTTGTTCTTCAGAAAAATACTAATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGAGTGATATATTTCTTGTGTCTTCTAGCGTTTATGTATGCACTGTATAGTGGAGTTCAGCACTGTTCCTTGTTTCTGCATGTTGGTTAAATGCTGTAAATTTGATGACTAATTTTTGCTTACTATTAATTACTTAATTTGGCTTGTTGCTATTTTTTGAGTGTGCATGTTTCAATGAGAGGTTGAGGTGCCGGGGAAGTGG

>Glyma.18g125700.4 sequence-type=transcript locus=Glyma.18g125700 ID=Glyma.18g125700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTGTTCCGCAGGTGAGGAAGGATTTCCCCGACTTCACCTTAGCTATCGCCGAAAACCCGTACCTTCATATAAACATATATATATCTGATACTCTCACGTTTCACGCGTCCTTCTCCCACCGCACCCCACACTTCCGGCACCGTCGGAACTCAGCACCGCACATCTGCACCCCACACTCGTCTTCTCACAACCGTCAATCGCAGTCACAGCGCACAGAAAAATACTAATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGAGTGATATATTTCTTGTGTCTTCTAGCGTTTATGTATGCACTGTATAGTGGAGTTCAGCACTGTTCCTTGTTTCTGCATGTTGGTTAAATGCTGTAAATTTGATGACTAATTTTTGCTTACTATTAATTACTTAATTTGGCTTGTTGCTATTTTTTGAGTGTGCATGTTTCAATGAGAGGTTGAGGTGCCGGGGAAGTGG

>Glyma.18g125700.5 sequence-type=transcript locus=Glyma.18g125700 ID=Glyma.18g125700.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
GTGTTCCGCAGGTGAGGAAGGATTTCCCCGACTTCACCTTAGCTATCGCCGAAAACCCGTACCTTCATATAAACATATATATATCTGATACTCTCACGTTTCACGCGTCCTTCTCCCACCGCACCCCACACTTCCGGCACCGTCGGAACTCAGCACCGCACATCTGCACCCCACACTCGTCTTCTCACAACCGTCAATCGCAGTCACAGCGCACAGCTCTAGTTCTCTCTCACAAGCTTTCTCCAGCTTTGCAACTAGCTTTGTCTGACTCTGGCATATATTTTTGTTCTTCAGAAAAATACTAATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGAGTGATATATTTCTTGTGTCTTCTAGCGTTTATGTATGCACTGTATAGTGGAGTTCAGCACTGTTCCTTGTTTCTGCATGTTGGTTAAATGCTGTAAATTTGATGACTAATTTTTGCTTACTATTAATTACTTAATTTGGCTTGTTGCTATTTTTTGAGTGTGCATGTTTCAATGAGAGGTTGAGGTGCCGGGGAAGTGG

Coding sequences of Glyma.18g125700

Limit To All Plant Sequences

>Glyma.18g125700.1 sequence-type=CDS polypeptide=Glyma.18g125700.1.p locus=Glyma.18g125700 ID=Glyma.18g125700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGA

>Glyma.18g125700.2 sequence-type=CDS polypeptide=Glyma.18g125700.2.p locus=Glyma.18g125700 ID=Glyma.18g125700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGA

>Glyma.18g125700.3 sequence-type=CDS polypeptide=Glyma.18g125700.3.p locus=Glyma.18g125700 ID=Glyma.18g125700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGA

>Glyma.18g125700.4 sequence-type=CDS polypeptide=Glyma.18g125700.4.p locus=Glyma.18g125700 ID=Glyma.18g125700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGA

>Glyma.18g125700.5 sequence-type=CDS polypeptide=Glyma.18g125700.5.p locus=Glyma.18g125700 ID=Glyma.18g125700.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATTCATCACAAAGTGCGGCTCTTGGGGGAAATGGTGGGAGTGGTGGAAATGGGACGTTGATTTCTCAAATTAATGACATGGCAGCCTCTGCAACAGGAGCTGATGATTCTATGCAGAAGCTGAACCAGGTCAGCAACTCCATTCAGAAAACCTTGGGCCTTATCCATCAGCTTTACCTCACAGTTTCTACCTTCAATGCTGCCTTTCAAATGCCTCTCCTCCAACGCATCAATGGCCTTGTTGCGGAGCTTGACAACATGGTTAAATTGGCAGAGAAGTGCAACATTCAGGTTCCTATGGAGGTTGTCAATTTAATTGATGATGGAAAGAATCCAGACGAATTTACCAAAGATGTTATAAACAGCTGTATTGCAAAGAATCAGATCACCAAAGGAAAAACTGATGCTTTAAAGAGTTTGCGCAAACATCTTTTGGAGGAATTGGAGCAGAACTTCCCTGATGAGGTTGAAACTTTTAGAGAGAGTCGTACTGCTGCAGCTGCTGAGTTGAAACGTCAGGCACAAAGCGCACTGCCAAATGGAGATGTGAGAGTTAAATCAGAGCATTGA

Predicted protein sequences of Glyma.18g125700

Limit To All Plant Sequences

>Glyma.18g125700.1.p sequence-type=predicted peptide transcript=Glyma.18g125700.1 locus=Glyma.18g125700 ID=Glyma.18g125700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKRQAQSALPNGDVRVKSEH*

>Glyma.18g125700.2.p sequence-type=predicted peptide transcript=Glyma.18g125700.2 locus=Glyma.18g125700 ID=Glyma.18g125700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKRQAQSALPNGDVRVKSEH*

>Glyma.18g125700.3.p sequence-type=predicted peptide transcript=Glyma.18g125700.3 locus=Glyma.18g125700 ID=Glyma.18g125700.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKRQAQSALPNGDVRVKSEH*

>Glyma.18g125700.4.p sequence-type=predicted peptide transcript=Glyma.18g125700.4 locus=Glyma.18g125700 ID=Glyma.18g125700.4.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKRQAQSALPNGDVRVKSEH*

>Glyma.18g125700.5.p sequence-type=predicted peptide transcript=Glyma.18g125700.5 locus=Glyma.18g125700 ID=Glyma.18g125700.5.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDSSQSAALGGNGGSGGNGTLISQINDMAASATGADDSMQKLNQVSNSIQKTLGLIHQLYLTVSTFNAAFQMPLLQRINGLVAELDNMVKLAEKCNIQVPMEVVNLIDDGKNPDEFTKDVINSCIAKNQITKGKTDALKSLRKHLLEELEQNFPDEVETFRESRTAAAAELKRQAQSALPNGDVRVKSEH*

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