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Report for Sequence Feature Glyma.18g115100

Feature Type:gene_model
Chromosome:Gm18
Start:13999969
stop:14000767
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g115100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT2G44100.1AT guanosine nucleotide diphosphate dissociation inhibitor 1 JGI N/AIEA
GO:0007264GO-bp small GTPase mediated signal transduction EnsemblGenomesN/AIEA
GO:0015031GO-bp protein transport EnsemblGenomesN/AIEA
GO:0050790GO-bp regulation of catalytic activity EnsemblGenomesN/AIEA
GO:0005622GO-cc intracellular EnsemblGenomesN/AIEA
GO:0005092GO-mf GDP-dissociation inhibitor activity EnsemblGenomesN/AIEA
GO:0005093GO-mf Rab GDP-dissociation inhibitor activity EnsemblGenomesN/AIEA
PTHR11787Panther RAB GDP-DISSOCIATION INHIBITOR JGI N/AIEA
PF00996PFAM GDP dissociation inhibitor JGI N/AIEA

Expression Patterns of Glyma.18g115100
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g115100 not represented in the dataset
Glyma.18g115100 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g115100 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g14443 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g115100
>Glyma.18g115100.1 sequence-type=CDS polypeptide=Glyma.18g115100.1.p locus=Glyma.18g115100 ID=Glyma.18g115100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGATGAGGAGTACGATGTGATTGTGTTGGGCATGGGTCTCAAGGAGTGCATTCTTAGCAGTCTTCTCTCCGTCGATGGCCTCAAGGTTCTGGACATGGACATGAATGACTATTACGGAGGAGAATCCACTTCGCTCAATCTTATTCAGCTTTGGAAGAGATTCAAGGGAGATGACAAGCCTCCTCCACATTTGGGTGCTAGCAGGGACTATAACATCGATATGAACCCTAAGTTTATTATGGCTAATGGCAATTTGGTGCAGGTTCTCATACATACCGATGTTACTAAGTATCTCTCTTTCAAAGTTATGGATGGGAGCTTTGTGTTTAATAAAGGAAAGGTATGTTCATAA
Predicted protein sequences of Glyma.18g115100
>Glyma.18g115100.1.p sequence-type=predicted peptide transcript=Glyma.18g115100.1 locus=Glyma.18g115100 ID=Glyma.18g115100.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MDEEYDVIVLGMGLKECILSSLLSVDGLKVLDMDMNDYYGGESTSLNLIQLWKRFKGDDKPPPHLGASRDYNIDMNPKFIMANGNLVQVLIHTDVTKYLSFKVMDGSFVFNKGKVCS*






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