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Report for Sequence Feature Glyma.18g103700

Feature Type:gene_model
Chromosome:Gm18
Start:11309282
stop:11311702
Source:JGI
Version:Wm82.a2.v1
High confidence:yes



A previous version of this gene model can be found here:

Annotations for Glyma.18g103700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT3G12490.2AT cystatin B JGI N/AIEA
GO:0010466GO-bp negative regulation of peptidase activity EnsemblGenomesN/AIEA
GO:0010951GO-bp negative regulation of endopeptidase activity EnsemblGenomesN/AIEA
GO:2000117GO-bp negative regulation of cysteine-type endopeptidase activity EnsemblGenomesN/AIEA
GO:0002020GO-mf protease binding EnsemblGenomesN/AIEA
GO:0004869GO-mf cysteine-type endopeptidase inhibitor activity EnsemblGenomesN/AIEA
GO:0004869GO-mf cysteine-type endopeptidase inhibitor activity JGI N/AIEA
GO:0030414GO-mf peptidase inhibitor activity EnsemblGenomesN/AIEA
PTHR11413Panther CYSTATIN FAMILY MEMBER JGI N/AIEA
PTHR11413:SF3Panther JGI N/AIEA
PF00031PFAM Cystatin domain JGI N/AIEA

Expression Patterns of Glyma.18g103700
Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology
Libault et al. 2010, Plant Phys 152(2):541-552.
Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection 		Severin et al. 2010, BMC Plant Biology 10:160
RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

View a gene family containing related genes from other legumes at LIS

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.


View gene and ortholog information at GlycineMine

Gene information in GlycineMine developed by LIS.


Related Plant Genes

View a gene family containing related genes from other plant species at PhyloGenes

Gene families from PhyloGenes.


Gene model name correspondences to Glyma.18g103700 Gene Call Version Wm82.a2.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g12240 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g103700
>Glyma.18g103700.1 sequence-type=CDS polypeptide=Glyma.18g103700.1.p locus=Glyma.18g103700 ID=Glyma.18g103700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGGCAATGATAGGAGGCATTAGCCAAGTGGAGGGAAGCCAAAACAGTGCTACCATCGATAGGCTCGCTCATTTTGCTGTTGATGAGCATAATAAGAAAGAGAATGCAGTTCTGGAATTTGTGAAGGTGGTAAATGTGAAACAGCAAGTGGTTTCTGGAATGCTGTACTATATCACTCTAGAGGCCAAGGATGGAGAGAAGAATAAAGTTTATGAGACCAAGGTTTGGGTGAAGCCATGGTTGGACTTCAAGGAGATACAGGAATTCAAGCTCATCGGTGATGCCCCTTATGCTGCACCCAGCTAA
Predicted protein sequences of Glyma.18g103700
>Glyma.18g103700.1.p sequence-type=predicted peptide transcript=Glyma.18g103700.1 locus=Glyma.18g103700 ID=Glyma.18g103700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MAMIGGISQVEGSQNSATIDRLAHFAVDEHNKKENAVLEFVKVVNVKQQVVSGMLYYITLEAKDGEKNKVYETKVWVKPWLDFKEIQEFKLIGDAPYAAPS*






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