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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT5G55760.1 | AT | sirtuin 1 | JGI | N/A | IEA |
GO:0070403 | GO-mf | NAD+ binding | EnsemblGenomes | N/A | IEA |
GO:0070403 | GO-mf | NAD+ binding | JGI | N/A | IEA |
KOG1905 | KOG | Class IV sirtuins (SIR2 family) | JGI | N/A | IEA |
PTHR11085 | Panther | CHROMATIN REGULATORY PROTEIN SIR2 | JGI | N/A | IEA |
PF02146 | PFAM | Sir2 family | JGI | N/A | IEA |
GN7V-65450 | SoyCyc9-rxn | Enzyme name not determined | Plant Metabolic Network | ISS |
Locus | Gene Symbol | Protein Name |
---|---|---|
SRT4 | NAD-dependent protein deacetylase SRT1-like |
Glyma.18g076300 not represented in the dataset |
Glyma.18g076300 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.08g330200 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma18g08450 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.18g076300.2 sequence-type=transcript locus=Glyma.18g076300 ID=Glyma.18g076300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 TATGAGAGTACATTGGTGTATTGGGGTCTCCTTAAAAGAAACAAATGTTTCTCTTTCTCTCTCTCTGTGTTTGAAGAACAAAACACACTTCTTCTCAATTTCTTCTTTCTTCTGAGAGAGAAAGAAAGTGAGGGACTTGGAGAGAATTTCTGTCATCACAGCACATTGAGTCACCAATCAACCATGTCTCTGGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTTTGCGAGAGAAAGTGGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACTGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCCTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCAAGCATGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGGAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCAAGGCGTTGTTCAGTTGCCAAATGTGGGACTAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTACAAAGGAGATGAATCCTGCTGAGAAGCATTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTTCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGTAACGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAAAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTATAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTTAGCGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAGCATGTAAAGCAGCCCTTGATTCTCTTAGTAATGGTGATTTTAAAAAAAGAAAAGCTAGTGTGACTGGTACTGGATCATCTAGGAAGCGTTCAAAGGGGTCCTCCAAGTGTAAATCTAGATCAGACAATATTAGGGGTCATACGTAGGTTTTTTACGTATGACATCAAGCATTAGAAACTGACATAGAGACTGAGTGAATTTTGTTAGATGTTACACTCAGTCTCCCCTAAATGGTGTCCATGATACTAAAGGCTTTTGATACCATAATTACTAATATAGTGGGTAGTATTCTTGGTGTGGCTTTTGGAATGTTTCTTTAACGAAAATTCCAGACAACTTTATGTGAATTATAGGTGTAAAAGGAAATTTAGTTTGAGAAATGCTGAGTATATGCAGAGCTCAACTGGTGCAAAAATGTTTTTTTCTTTGTCCCTTTCCCGGTGAAGTGTTATTTTTTATCTTGAAAATCTTTCCAAAACTTGCCCAGTTCATCTTATTTGGAGTTCGAAATGTAAGTGAAAATTGCTGAT >Glyma.18g076300.3 sequence-type=transcript locus=Glyma.18g076300 ID=Glyma.18g076300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 TATGAGAGTACATTGGTGTATTGGGGTCTCCTTAAAAGAAACAAATGTTTCTCTTTCTCTCTCTCTGTGTTTGAAGAACAAAACACACTTCTTCTCAATTTCTTCTTTCTTCTGAGAGAGAAAGAAAGTGAGGGACTTGGAGAGAATTTCTGTCATCACAGCACATTGAGTCACCAATCAACCATGTCTCTGGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTTTGCGAGAGAAAATAGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACTGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCCTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCAAGCATGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGGAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCAAGGCGTTGTTCAGTTGCCAAATGTGGGACTAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTACAAAGGAGATGAATCCTGCTGAGAAGCATTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTTCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGTAACGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAAAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTATAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGTTTTCACACACTATGCAACATGTTTCTTTGTGCCATTGATCAAATTTTTACTCAGTTTATTGGTCCTTACGAACTAGACGAGATAAAACTGATTTTGAAGAATTGTGAAAATGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTTAGCGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAGCATGTAAAGCAGCCCTTGATTCTCTTAGTAATGGTGATTTTAAAAAAAGAAAAGCTAGTGTGACTGGTACTGGATCATCTAGGAAGCGTTCAAAGGGGTCCTCCAAGTGTAAATCTAGATCAGACAATATTAGGGGTCATACGTAGGTTTTTTACGTATGACATCAAGCATTAGAAACTGACATAGAGACTGAGTGAATTTTGTTAGATGTTACACTCAGTCTCCCCTAAATGGTGTCCATGATACTAAAGGCTTTTGATACCATAATTACTAATATAGTGGGTAGTATTCTTGGTGTGGCTTTTGGAATGTTTCTTTAACGAAAATTCCAGACAACTTTATGTGAATTATAGGTGTAAAAGGAAATTTAGTTTGAGAAATGCTGAGTATATGCAGAGCTCAACTGGTGCAAAAATGTTTTTTTCTTTGTCCCTTTCCCGGTGAAGTGTTATTTTTTATCTTGAAAATCTTTCCAAAACTTGCCCAGTTCATCTTATTTGGAGTTCGAAATGTAAGTGAAAATTGCTGAT
>Glyma.18g076300.1 sequence-type=CDS polypeptide=Glyma.18g076300.1.p locus=Glyma.18g076300 ID=Glyma.18g076300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCTCTGGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTTTGCGAGAGAAAATAGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACTGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCCTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCAAGCATGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGGAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCAAGGCGTTGTTCAGTTGCCAAATGTGGGACTAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTACAAAGGAGATGAATCCTGCTGAGAAGCATTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTTCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGTAACGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAAAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTATAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTTAGCGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAGCATGTAAAGCAGCCCTTGATTCTCTTAGTAATGGTGATTTTAAAAAAAGAAAAGCTAGTGTGACTGGTACTGGATCATCTAGGAAGCGTTCAAAGGGGTCCTCCAAGTGTAAATCTAGATCAGACAATATTAGGGGTCATACGTAG >Glyma.18g076300.2 sequence-type=CDS polypeptide=Glyma.18g076300.2.p locus=Glyma.18g076300 ID=Glyma.18g076300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCTCTGGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTTTGCGAGAGAAAGTGGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACTGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCCTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCAAGCATGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGGAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCAAGGCGTTGTTCAGTTGCCAAATGTGGGACTAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTACAAAGGAGATGAATCCTGCTGAGAAGCATTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTTCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGTAACGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAAAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTATAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGAGAACAGCATATAACAAAGCATTTGAAATGGTTCTGAAACTCAACTTTAGCGATGGCTGTGGTTGCTCATCCCTTGAAATTGATGTCCCTGTTGATTTTAAGGTTTCAACTGACTGCTTTGACTTTGATAAGGACTACATATTCCAAAAGCTGAGAGACAAGGCAGTTCTTGAATCAAGATGTGGTCAGAATGCTGTTATTGAGAGAAAGACCATCTTGACACCTAGAAGTGATGTCACTACCTATGCCATTGTGACCAATGTTGTTCAGTACAGCAAAGCATGTAAAGCAGCCCTTGATTCTCTTAGTAATGGTGATTTTAAAAAAAGAAAAGCTAGTGTGACTGGTACTGGATCATCTAGGAAGCGTTCAAAGGGGTCCTCCAAGTGTAAATCTAGATCAGACAATATTAGGGGTCATACGTAG >Glyma.18g076300.3 sequence-type=CDS polypeptide=Glyma.18g076300.3.p locus=Glyma.18g076300 ID=Glyma.18g076300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGTCTCTGGGGTATGCCGAGAAGCTTTCCTACATAGAAGATGTGGGCAACGTTGGAATGGTCGAATATTTCGACCCATCCCATGTTTTGCGAGAGAAAATAGATCAACTTGCTATCATGATAAAAAAGAGTAAGCATCTAGTGGTGTTTACTGGTGCAGGAATATCAACTTCTTGTGGTATACCTGATTTTCGAGGTCCCAAGGGAATTTGGACACTTCAGCGTGAAGGTAAAGCCCTGCCTGAAGCATCACTGCCATTTCATCGTGCAGCGCCAAGCATGACACACATGGCTCTGGTTGAATTAGAAAAGGCTGGCATTTTGAAGTTCGTCATCAGTCAGAATGTTGATGGTCTCCATCTTCGATCTGGAATACCAAGGGAGAAACTTGCTGAATTGCACGGGAATTCCTTCATGGAGACATGCCCTTCTTGTGGAGAAGAGTACTTTCGTGATTTTGAGGTAGAAACTATTGGTTTAAAGGAGACTTCAAGGCGTTGTTCAGTTGCCAAATGTGGGACTAGACTTAAGGATACAGTCCTTGACTGGGAGGATGCATTGCCTACAAAGGAGATGAATCCTGCTGAGAAGCATTGCAAACAGGCAGATATAGTGTTATGCCTGGGTACAAGTTTACAAATAACTCCAGCATGCAACTTGCCTCTGAAAGCACTTCGTGGTGGGGGTAAAGTTGTTATTGTAAATCTCCAGAAAACTCCAAAGGACAAAAAAGCCAGTTTAGTCATACATGGGTTTGTAGATAAGGTAATTGCGGGTGTCATGGACCAGCTTAATATGCAGATTTCTCCATTTGTCAGGATTGATCTTTTCCAGATTATTCTAGTGCAAGCTTTGAGTAACGATAAAAGATATGTGAACTGGACTCTCCAGGTTGCAAGTGCTCATGGACAAAAAGCAGCATTGCCTTTCATCAAGTCTGTTGAGATCTCCTTCTTGGACAGGGAAGATTATAAAGCAGCCATTCTGGATAAGCAACCATTTCGGCTTAAAAGGTTTTCACACACTATGCAACATGTTTCTTTGTGCCATTGA
>Glyma.18g076300.1.p sequence-type=predicted peptide transcript=Glyma.18g076300.1 locus=Glyma.18g076300 ID=Glyma.18g076300.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCSVAKCGTRLKDTVLDWEDALPTKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDQLNMQISPFVRIDLFQIILVQALSNDKRYVNWTLQVASAHGQKAALPFIKSVEISFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNAVIERKTILTPRSDVTTYAIVTNVVQYSKACKAALDSLSNGDFKKRKASVTGTGSSRKRSKGSSKCKSRSDNIRGHT* >Glyma.18g076300.2.p sequence-type=predicted peptide transcript=Glyma.18g076300.2 locus=Glyma.18g076300 ID=Glyma.18g076300.2.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKVDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCSVAKCGTRLKDTVLDWEDALPTKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDQLNMQISPFVRIDLFQIILVQALSNDKRYVNWTLQVASAHGQKAALPFIKSVEISFLDREDYKAAILDKQPFRLKRRTAYNKAFEMVLKLNFSDGCGCSSLEIDVPVDFKVSTDCFDFDKDYIFQKLRDKAVLESRCGQNAVIERKTILTPRSDVTTYAIVTNVVQYSKACKAALDSLSNGDFKKRKASVTGTGSSRKRSKGSSKCKSRSDNIRGHT* >Glyma.18g076300.3.p sequence-type=predicted peptide transcript=Glyma.18g076300.3 locus=Glyma.18g076300 ID=Glyma.18g076300.3.Wm82.a2.v1 annot-version=Wm82.a2.v1 MSLGYAEKLSYIEDVGNVGMVEYFDPSHVLREKIDQLAIMIKKSKHLVVFTGAGISTSCGIPDFRGPKGIWTLQREGKALPEASLPFHRAAPSMTHMALVELEKAGILKFVISQNVDGLHLRSGIPREKLAELHGNSFMETCPSCGEEYFRDFEVETIGLKETSRRCSVAKCGTRLKDTVLDWEDALPTKEMNPAEKHCKQADIVLCLGTSLQITPACNLPLKALRGGGKVVIVNLQKTPKDKKASLVIHGFVDKVIAGVMDQLNMQISPFVRIDLFQIILVQALSNDKRYVNWTLQVASAHGQKAALPFIKSVEISFLDREDYKAAILDKQPFRLKRFSHTMQHVSLCH*
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