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A previous version of this gene model can be found here:
Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
---|---|---|---|---|---|
AT1G13980.1 | AT | sec7 domain-containing protein | JGI | N/A | IEA |
GO:0000911 | GO-bp | cytokinesis by cell plate formation | EnsemblGenomes | N/A | IEA |
GO:0001736 | GO-bp | establishment of planar polarity | EnsemblGenomes | N/A | IEA |
GO:0006897 | GO-bp | endocytosis | EnsemblGenomes | N/A | IEA |
GO:0007155 | GO-bp | cell adhesion | EnsemblGenomes | N/A | IEA |
GO:0009793 | GO-bp | embryo development ending in seed dormancy | EnsemblGenomes | N/A | IEA |
GO:0009826 | GO-bp | unidimensional cell growth | EnsemblGenomes | N/A | IEA |
GO:0009880 | GO-bp | embryonic pattern specification | EnsemblGenomes | N/A | IEA |
GO:0009942 | GO-bp | longitudinal axis specification | EnsemblGenomes | N/A | IEA |
GO:0010087 | GO-bp | phloem or xylem histogenesis | EnsemblGenomes | N/A | IEA |
GO:0010274 | GO-bp | hydrotropism | EnsemblGenomes | N/A | IEA |
GO:0010311 | GO-bp | lateral root formation | EnsemblGenomes | N/A | IEA |
GO:0010540 | GO-bp | basipetal auxin transport | EnsemblGenomes | N/A | IEA |
GO:0016192 | GO-bp | vesicle-mediated transport | EnsemblGenomes | N/A | IEA |
GO:0032012 | GO-bp | regulation of ARF protein signal transduction | EnsemblGenomes | N/A | IEA |
GO:0032012 | GO-bp | regulation of ARF protein signal transduction | JGI | N/A | IEA |
GO:0032509 | GO-bp | endosome transport via multivesicular body sorting pathway | EnsemblGenomes | N/A | IEA |
GO:0048765 | GO-bp | root hair cell differentiation | EnsemblGenomes | N/A | IEA |
GO:0065009 | GO-bp | regulation of molecular function | EnsemblGenomes | N/A | IEA |
GO:0071555 | GO-bp | cell wall organization | EnsemblGenomes | N/A | IEA |
GO:0005768 | GO-cc | endosome | EnsemblGenomes | N/A | IEA |
GO:0005802 | GO-cc | trans-Golgi network | EnsemblGenomes | N/A | IEA |
GO:0005886 | GO-cc | plasma membrane | EnsemblGenomes | N/A | IEA |
GO:0005086 | GO-mf | ARF guanyl-nucleotide exchange factor activity | EnsemblGenomes | N/A | IEA |
GO:0005086 | GO-mf | ARF guanyl-nucleotide exchange factor activity | JGI | N/A | IEA |
GO:0005488 | GO-mf | binding | EnsemblGenomes | N/A | IEA |
GO:0042802 | GO-mf | identical protein binding | EnsemblGenomes | N/A | IEA |
GO:0042803 | GO-mf | protein homodimerization activity | EnsemblGenomes | N/A | IEA |
KOG0928 | KOG | Pattern-formation protein/guanine nucleotide exchange factor | JGI | N/A | IEA |
PTHR10663 | Panther | GUANYL-NUCLEOTIDE EXCHANGE FACTOR | JGI | N/A | IEA |
PTHR10663:SF6 | Panther | JGI | N/A | IEA | |
PF01369 | PFAM | Sec7 domain | JGI | N/A | IEA |
Glyma.18g035800 not represented in the dataset |
Glyma.18g035800 not represented in the dataset |
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection |
Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome |
Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.
Gene information in GlycineMine developed by LIS.
Gene families from PhyloGenes.
Paralog | Evidence | Comments |
---|---|---|
Glyma.11g221800 | IGC | Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35. |
Corresponding Name | Annotation Version | Evidence | Comments |
---|---|---|---|
Glyma18g04000 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
>Glyma.18g035800.1 sequence-type=CDS polypeptide=Glyma.18g035800.1.p locus=Glyma.18g035800 ID=Glyma.18g035800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 ATGGGACGTCTGAAGCTGCAAGCTGGTATCAATGCAATAGAGGAAGAGGAACCTGAGGAATGTGATGCTGCCTATCCTAACAAAACAACTTTGGCATGCATGATCAATTCAGAGATTGGTGCTGTTTTGGCGGTCATGAGAAGAAATGTAAGATGGGGAGGTCGTTATATGTCTGGCGATGATCAGCTGGAACACTCTCTTATTCAGTCTTTTAAGACAGTAAGGAGACAAATCTTTTCGTGGCACCACCATCAGTGGCAAGCTATTAACCCTGCCTTGTATCTACAGCCGTTTTTAGATGTAATTAGGTCTGATGAAACTGGTGCCCCAATTACTAGTGTTGCTTTGTCATCTGTTTACAAGATTTTGACTCTTGATGTGATCGATCATAATACTGTCAATGTTGAGGATGCCATGCACTTGGTTGTTGATGCTGTCACTAGCTGCAGATTTGAGGTCACTGATCCTTCTTCGGAAGAAGTTGTTTTAATGAAGATACTACAAGTTCTTCTAGCTTGTATGAAAAGTAAAGCATCTATAATGCTGAGTAACCAACATGTTTGCACCATAGTGAATACTTGTTTCCGGATTGTTCATCAAGCAGGAAGTAAAGGTGAGTTGTTGCAGCAGATAGCACGGTACACAATGCATGAACTTGTAAGGTGTATTTTCTCTCACCTTCAAGATGTTGGCAACACAGACCATGCATTGGTTAATGGGAGCACTAATTTGAAACAGGAGACCGGAGGCCTAGATAATGAGTATGCGTTTGGAAGTAGACAATCGGAGAATGGCAGCATGACTTCTGAATATGATAATCAGTCATTATCTACAAACTCTGCTCCCAATGCTGCAAGTGTTGTGAAAACAACTGTGATGGACGAAAACACAGCGATAACTATTACTGGAAAGGAGGGTGGACCACATGACATGCATCTCATGACTGAACCATATGGTGTTCCTTGCATGGTGGAAATATTTCACTTTTTGTGTTCTTTGCTGAATGTTGTCGAGCATACAGGAATGGGTCCTAGATCAAACACACTAGCATTTGATGAAGATGTGCCTCTCTTTGCCTTAAATTTAATTAATTCAGCAATAGAACTTGGAGGACCTTCTATTTGTCGTCACCCAAGGTTGCTGAGCTTAATCCAGGATGAATTGTTTCATAATCTGATGCAGTTTGGTTTGTCAACGAGTCCCCTTATACTTTCGATGGTGTGTAGCATTGTTCTCAATTTGTATCATCATCTTCGTACAGAACTCAAATTACAGCTGGAAGCATTTTTTTCTTGTGTCATTTTGAGACTTGCACAAAGCAGATATGGGGCTTCATACCAGCAGCAAGAGGTAGCCATGGAGGCCCTTGTTGACTTCTGTAGGCAAAAGACATTTATGGTAGATATGTATGCTAATTTTGACTGTGACATAACTTGCAGTAATGTCTTTGAAGACCTTGCTAATTTATTGTCCAAAAGTGCATTTCCTGTGAATTGTCCATTGTCTGCCATGCATATTCTTGCTTTGGATGGTCTTATTGCTGTTATACAGGGAATGGCTGAAAGGATAGCCAATGGATCTGTAAGCTCAGAATATTCTCCAGTTAATCTTGAAGAGTATACTCCATTCTGGATGGTTAAATGTGAGAATTATAATGATCCAAATCATTGGGTTCCTTTTGTCCGCCGAAGAAAGTACATAAAGAGAAGACTGATGATTGGTGCTGACCACTTTAATCGTGATCCTAAGAAAGGTCTAGAGTTTCTCCAAGGAACACATCTTTTGCCTGACAAACTTGATCCCCAAAGTGTTGCCTGCTTCTTCAGATACACTGCTGGGTTGGATAAGAATCTTGTTGGTGATTTCCTTGGAAATCATGATGAATTCTGTGTTCAGGTTCTTCATGAATTTGCTGGAACATTTGATTTCCAAGACATGAACTTAGACACAGCTCTGCGTCTATTCTTGGAGACTTTCAGACTTCCTGGAGAATCACAAAAGATACATAGGGTGCTTGAAGCTTTCTCTGAGAGATATTATGAACAATCGCCACATATCCTAGCTAACAAGGATGCTGCTCTTGTGTTATCATACTCAATGATAATGCTTAATACAGATCAGCACAATGTGCAAGTTAAAAAGAAGATGACAGAAGAGGATTTTATCCGGAATAATAGGCATATAAATGGTGGCAATGATCTGCCTCGAGAAATGCTGACAGAGATTTACCATTCAATTTGTAAGAATGAAATTCGCACAATCCCTGAACAAGGTGTTGGATTTCCTGAAATGACACCAAGTCGGTGGATTGATCTAATGCATAAGTCCAAAAAAACTGCTCCATTTATTGTATCTGATTCTAAGGCCTACCTTGATCATGATATGTTTGCCATAATGTCAGGCCCAACGATTGCTGCCATCTCTGTGGTATTTGATCATGCTGAACAGGAAGAGGTATACCAAACATGTATGGATGGGTTCTTAGCTATTGCTAAAATTTCAGCTTGCCATCATCTTGAAGATGTTCTTGATGATCTGGTAGTGTCGCTTTGCAAGTTCACTACACTTTTAAACCCATCATCAGTTGAGGAACCAGTCCTTGCCTTTGGAGATGACATGAAAGCAAGACTAGCAACTGTGACAGTATTCACTATAGCAAACAGGTATGGGGATTACATACGCACAGGTTGGAGAAATATTCTTGATTGCATCTTAAGACTGCACAAGCTTGGTCTTCTTCCTGCCCGTGTTGCCAGTGATGCAGCTGACGAATCAGAGCTTTCTGCTGAAACTGTGCATGGAAAGCCTATTATGAATTCTTTATCCTCAGCTCATATGCAATCTATTGGCACTCCAAGGAGATCCTCGGGATTGATGGGTAGATTTAGTCAACTCTTATCTCTTGACACTGAGGAACCAAGATCACAACCTACTGAACAACAACTTGCTGCTCATCAGCGCACCCTACAAACCATACAGAAGTGTCATATTGACAGCATATTCACGGAGAGTAAATTCCTGCAAGCTGAATCTCTATTGCAGCTAGCAAGAGCACTCATTTGGGCTGCGGGGAGACCACAAAAAGGGAACAGCACACCCGAGGATGAAGATACAGCAGTTTTCTGCCTGGAGTTGCTGATTGCAATCACTTTGAATAACAGGGATAGAATTGGGATTCTTTGGCAGGGTGTGTATGAACACATATCCAACATTGTTCAGTCAACTGTAATGCCCTGTGCCCTGGTAGAGAAGGCTGTTTTTGGACTCCTGCGGATTTGCCAGCGGTTGCTTCCCTACAAGGAGAACATTGCTGATGAACTTCTGAGGTCATTGCAACTTGTCTTGAAGCTTGATGCCCGGGTTGCAGATGCATACTGTGAGCAGATTACTCAGGAGGTCAGTCGCCTTGTGAAGGCAAATGCTTCTCATATAAGATCTCAGTTAGGATGGCGGACAATTACATCACTGCTTTCCATCACAGCTAGACACATAGAAGCATCTGAGGCTGGGTTTGATGCACTATTGTTCATAATGTCTGACGGTACCCACTTGCTTCCAGCTAATTACATTCTGTGTGTAGATACTGCCAGGCAGTTTGCTGAGTCTCGTGTTGGACAAGCAGAGCGATCTGTGCGGGCACTAGATCTCATGGCAGGGTCTGTCAATTGCTTGGCCCAGTGGACTAGTGAGGCTAAGGGAGCAATGGAGGAGGAACAAATGTCTAAGTTGTCTCAGGATATCGGAGAGATGTGGTTGAGACTAGTACAAGGTCTAAGGAAGGTATGTTTAGACCAGAGAGAGGAGGTTAGAAATCATGCTTTATTATCGCTGCAGAAGTGCTTGACAGGGGCCGATGGCATTTATCTACCATACAGCTTGTGGTTGCAATGTTTTGATCTTGTGATCTTCACTGTGCTTGATGACCTGCTTGAGATTGCACAGGGACACTCTCAAAAGGACTACCGCAACATGGAAGGCACACTTATCTTAGCAATGAAGCTCTTGTCCAAAGTTTTTCTTCAATTACTCCCAGAATTATCACAATTGACAACCTTCTGTAAGCTATGGTTAGGTGTACTGACCAGAATGGAAAAATATATAAAGGTGAAGGTTAGGGGGAAAAGAAGCGAGAAGCTTCAAGAGACAATGCCAGAGCTGCTTAAAAACTCCTTGCTTGTTATGAAGATGAGGGGTATACTGGCGCAGAGGAGTGCCTTGGGTGGTGATAGTCTGTGGGAACTTACATGGCTACACGTGAATAACATTTCACCATCATTGCAACTTGAGGTATTCCCTGAGCAGGATTCTGAGCATTTGCAGCACAAGCAGGGCGAATCAATAGGAGGTACGGTGCCTGATGAAAAGGTTTCCATGCCTTCAAGTGAAACAGCAAGCCGTGAAGATGCTGGCATTGTTGGTTGA
>Glyma.18g035800.1.p sequence-type=predicted peptide transcript=Glyma.18g035800.1 locus=Glyma.18g035800 ID=Glyma.18g035800.1.Wm82.a2.v1 annot-version=Wm82.a2.v1 MGRLKLQAGINAIEEEEPEECDAAYPNKTTLACMINSEIGAVLAVMRRNVRWGGRYMSGDDQLEHSLIQSFKTVRRQIFSWHHHQWQAINPALYLQPFLDVIRSDETGAPITSVALSSVYKILTLDVIDHNTVNVEDAMHLVVDAVTSCRFEVTDPSSEEVVLMKILQVLLACMKSKASIMLSNQHVCTIVNTCFRIVHQAGSKGELLQQIARYTMHELVRCIFSHLQDVGNTDHALVNGSTNLKQETGGLDNEYAFGSRQSENGSMTSEYDNQSLSTNSAPNAASVVKTTVMDENTAITITGKEGGPHDMHLMTEPYGVPCMVEIFHFLCSLLNVVEHTGMGPRSNTLAFDEDVPLFALNLINSAIELGGPSICRHPRLLSLIQDELFHNLMQFGLSTSPLILSMVCSIVLNLYHHLRTELKLQLEAFFSCVILRLAQSRYGASYQQQEVAMEALVDFCRQKTFMVDMYANFDCDITCSNVFEDLANLLSKSAFPVNCPLSAMHILALDGLIAVIQGMAERIANGSVSSEYSPVNLEEYTPFWMVKCENYNDPNHWVPFVRRRKYIKRRLMIGADHFNRDPKKGLEFLQGTHLLPDKLDPQSVACFFRYTAGLDKNLVGDFLGNHDEFCVQVLHEFAGTFDFQDMNLDTALRLFLETFRLPGESQKIHRVLEAFSERYYEQSPHILANKDAALVLSYSMIMLNTDQHNVQVKKKMTEEDFIRNNRHINGGNDLPREMLTEIYHSICKNEIRTIPEQGVGFPEMTPSRWIDLMHKSKKTAPFIVSDSKAYLDHDMFAIMSGPTIAAISVVFDHAEQEEVYQTCMDGFLAIAKISACHHLEDVLDDLVVSLCKFTTLLNPSSVEEPVLAFGDDMKARLATVTVFTIANRYGDYIRTGWRNILDCILRLHKLGLLPARVASDAADESELSAETVHGKPIMNSLSSAHMQSIGTPRRSSGLMGRFSQLLSLDTEEPRSQPTEQQLAAHQRTLQTIQKCHIDSIFTESKFLQAESLLQLARALIWAAGRPQKGNSTPEDEDTAVFCLELLIAITLNNRDRIGILWQGVYEHISNIVQSTVMPCALVEKAVFGLLRICQRLLPYKENIADELLRSLQLVLKLDARVADAYCEQITQEVSRLVKANASHIRSQLGWRTITSLLSITARHIEASEAGFDALLFIMSDGTHLLPANYILCVDTARQFAESRVGQAERSVRALDLMAGSVNCLAQWTSEAKGAMEEEQMSKLSQDIGEMWLRLVQGLRKVCLDQREEVRNHALLSLQKCLTGADGIYLPYSLWLQCFDLVIFTVLDDLLEIAQGHSQKDYRNMEGTLILAMKLLSKVFLQLLPELSQLTTFCKLWLGVLTRMEKYIKVKVRGKRSEKLQETMPELLKNSLLVMKMRGILAQRSALGGDSLWELTWLHVNNISPSLQLEVFPEQDSEHLQHKQGESIGGTVPDEKVSMPSSETASREDAGIVG*
Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA | ||