Glyma.18g034400

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Report for Sequence Feature Glyma.18g034400

Feature Type:	gene_model
Chromosome:	Gm18
Start:	2655109
stop:	2659186
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.18g034400

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT2G39770.1	AT	Glucose-1-phosphate adenylyltransferase family protein	JGI	N/A	IEA
GO:0009058	GO-bp	biosynthetic process	EnsemblGenomes	N/A	IEA
GO:0009058	GO-bp	biosynthetic process	JGI	N/A	IEA
GO:0016779	GO-mf	nucleotidyltransferase activity	EnsemblGenomes	N/A	IEA
GO:0016779	GO-mf	nucleotidyltransferase activity	JGI	N/A	IEA
KOG1322	KOG	GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase	JGI	N/A	IEA
PTHR22572	Panther	SUGAR-1-PHOSPHATE GUANYL TRANSFERASE	JGI	N/A	IEA
PF00483	PFAM	Nucleotidyl transferase	JGI	N/A	IEA
PWY-5659	SoyCyc9	GDP-mannose biosynthesis	Plant Metabolic Network		ISS
PWY-882	SoyCyc9	L-ascorbate biosynthesis I (L-galactose pathway)	Plant Metabolic Network		ISS
GN7V-47333	SoyCyc9-rxn	mannose-1-phosphate guanylyltransferase	Plant Metabolic Network		ISS

Expression Patterns of Glyma.18g034400

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g034400 not represented in the dataset	Glyma.18g034400 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Paralogs of Glyma.18g034400

Paralog	Evidence	Comments
Glyma.11g223700	IGC	Paralogs in soybean determined by Steven Cannon using BLAST, DAGChainer, PAML, and selection of gene pairs from synteny blocks with median Ks values of less than 0.35.

Gene model name correspondences to Glyma.18g034400 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma18g03840	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.18g034400

Limit To All Plant Sequences

>Glyma.18g034400.2 sequence-type=transcript locus=Glyma.18g034400 ID=Glyma.18g034400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAATCAAAGCTGAAGAGGGAAAGCTAAACTGCCACCATTAGTGAGCGAAATCGCAAAAGCCGTACCCACCGACGCTTTCACCAAACAAGGCCTAAGGTTCCTTGACAGACTGAAAAGGGAATCCaattaattatgaattaattataataattaGAAAAAAAAGCGTGCATGGTTATAGAATGTATAGTTGGCGCGTATATAAACAAGGATGATGACGAGCGGTGGCCAACACCATCGTAACACCTCACGTACTGGACCGTTGGGTTGTTCTTCGAGACCCTCTCTGACTCGCCGGGTTGACTCGCTCGAGTTTGGGGGTTTCTGATTCACCCGGGGACGGATCTCAATTTTGTCTCAGGAAAAGCAAAGGGCATCATATTACTATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAAGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAACCCATGGAGGAGAGGCTACCATAATGGTGACAAAGGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGCGAGGGATGTCTCGTTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCTAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTATAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTAAAGCCAGAGATTGTCATGTGAGGTTACTGTCTTAAATTCATAGCATGTGATTAGGAAGCTCTAAGTTTGTGTCTGAAATGtgtttgtttgtttcatttgtttttcctttttttTCCGCATCCCAATCCGTTTCTCTTTGTTACGTATTGTACAAGTCAATTTCGTTTAGTTTAGAATGAGTGATGCCATAATTTACAATGTTGAAAGGTCTGTGTCTTTGTAAAGGGTATAAAGTTGGTTTACTGTTCCTAAGTTGTGTAATATATTCAGTGTTGTTTATCTCTCTTTTTTTTTTGCCAAGATTTCTCTGTAATTATTTGAGATTAATTCCGCCAACAACCAGATAATGGTGGGCCTTTGTCATGA

>Glyma.18g034400.3 sequence-type=transcript locus=Glyma.18g034400 ID=Glyma.18g034400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
AAAATCAAAGCTGAAGAGGGAAAGCTAAACTGCCACCATTAGTGAGCGAAATCGCAAAAGCCGTACCCACCGACGCTTTCACCAAACAAGGCCTAAGGTTCCTTGACAGACTGAAAAGGGAATCCaattaattatgaattaattataataattaGAAAAAAAAGCGTGCATGGTTATAGAATGTATAGTTGGCGCGTATATAAACAAGGATGATGACGAGCGGTGGCCAACACCATCGTAACACCTCACGTACTGGACCGTTGGGTTGTTCTTCGAGACCCTCTCTGACTCGCCGGGTTGACTCGCTCGAGTTTGGGGGTTTCTGATTCACCCGGGGACGGATCTCAATTTTGTCTCAGACTGTTCTTTCTAATTTAAGTTACCATCTTTAGCTGCATTCGTGTCACGCTCCTTTGAATGCCCGTCACCTCAGGAAAAGCAAAGGGCATCATATTACTATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAAGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAACCCATGGAGGAGAGGCTACCATAATGGTGACAAAGGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGCGAGGGATGTCTCGTTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCTAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTATAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTAAAGCCAGAGATTGTCATGTGAGGTTACTGTCTTAAATTCATAGCATGTGATTAGGAAGCTCTAAGTTTGTGTCTGAAATGtgtttgtttgtttcatttgtttttcctttttttTCCGCATCCCAATCCGTTTCTCTTTGTTACGTATTGTACAAGTCAATTTCGTTTAGTTTAGAATGAGTGATGCCATAATTTACAATGTTGAAAGGTCTGTGTCTTTGTAAAGGGTATAAAGTTGGTTTACTGTTCCTAAGTTGTGTAATATATTCAGTGTTGTTTATCTCTCTTTTTTTTTTGCCAAGATTTCTCTGTAATTATTTGAGATTAATTCCGCCAACAACCAGATAATGGTGGGCCTTTGTCATGA

Coding sequences of Glyma.18g034400

Limit To All Plant Sequences

>Glyma.18g034400.1 sequence-type=CDS polypeptide=Glyma.18g034400.1.p locus=Glyma.18g034400 ID=Glyma.18g034400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAAGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAACCCATGGAGGAGAGGCTACCATAATGGTGACAAAGGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGCGAGGGATGTCTCGTTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCTAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTATAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTAAAGCCAGAGATTGTCATGTGA

>Glyma.18g034400.2 sequence-type=CDS polypeptide=Glyma.18g034400.2.p locus=Glyma.18g034400 ID=Glyma.18g034400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAAGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAACCCATGGAGGAGAGGCTACCATAATGGTGACAAAGGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGCGAGGGATGTCTCGTTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCTAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTATAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTAAAGCCAGAGATTGTCATGTGA

>Glyma.18g034400.3 sequence-type=CDS polypeptide=Glyma.18g034400.3.p locus=Glyma.18g034400 ID=Glyma.18g034400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAAGGCACTAATTCTTGTTGGAGGGTTTGGAACAAGGTTGAGGCCATTGACACTCAGTGTTCCCAAGCCTCTTGTTGATTTTGCTAACAAGCCCATGATTCTGCATCAGATAGAAGCTCTCAAGGCCATTGGCGTCAATGAAGTGGTACTAGCTATCAATTACCAACCAGAGGTCATGTTGAATTTCTTGAAGGAGTTTGAGGCAAAACTTGGTATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTAGGTACTGCAGGCCCCTTGGCTCTTGCGAGGGATAAGCTAATAGATGACTCTGGAGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTTAAAGAAATGATTGAATTCCACAAAACCCATGGAGGAGAGGCTACCATAATGGTGACAAAGGTCGATGAGCCATCAAAATATGGTGTGGTTGTGATGGAGGAGACTACCGGGCAGGTTGAGAGATTTGTAGAGAAACCAAAGTTGTTTGTTGGCAACAAAATCAATGCTGGAATCTACCTATTGAACCCCTCAGTTTTGGATCGAATTGAACTGAGGCCCACTTCTATCGAGAAAGAGGTGTTTCCAAAGATTGCAGCAGAGAAAAAGCTATATGCAATGGTCCTGCCAGGATTCTGGATGGACATTGGACAACCAAAGGACTATATTTCTGGCCTGACACTTTACCTGGACTCGCTGAGGAAAAAGTCTCCTTCTAAACTGGCCAGTGGTCCTCACTTTGTGGGGAATGTCATTGTGCATGAAACTGCCACTATTGGCGAGGGATGTCTCGTTGGACCTGATGTTGCAATCGGTCCTGGCTGTGTTGTTGAGTCAGGTGTCAGGCTTTCACGCTGCACAGTTATGCGAGGAGTTCGGATTAAAAAGCATACTTGCATATCTAACAGTATCATTGGGTGGCATTCCACTGTTGGGCAATGGGCCCGTGTGGAGAATATGACTATCCTTGGAGAAGATGTCCATGTTTGTGATGAAGTTTATAGCAATGGTGGTGTAGTTTTGCCCCACAAGGAGATCAAGTCAAACATTCTAAAGCCAGAGATTGTCATGTGA

Predicted protein sequences of Glyma.18g034400

Limit To All Plant Sequences

>Glyma.18g034400.1.p sequence-type=predicted peptide transcript=Glyma.18g034400.1 locus=Glyma.18g034400 ID=Glyma.18g034400.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVNEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKTHGGEATIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPKDYISGLTLYLDSLRKKSPSKLASGPHFVGNVIVHETATIGEGCLVGPDVAIGPGCVVESGVRLSRCTVMRGVRIKKHTCISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVM*

>Glyma.18g034400.2.p sequence-type=predicted peptide transcript=Glyma.18g034400.2 locus=Glyma.18g034400 ID=Glyma.18g034400.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVNEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKTHGGEATIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPKDYISGLTLYLDSLRKKSPSKLASGPHFVGNVIVHETATIGEGCLVGPDVAIGPGCVVESGVRLSRCTVMRGVRIKKHTCISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVM*

>Glyma.18g034400.3.p sequence-type=predicted peptide transcript=Glyma.18g034400.3 locus=Glyma.18g034400 ID=Glyma.18g034400.3.Wm82.a2.v1 annot-version=Wm82.a2.v1
MKALILVGGFGTRLRPLTLSVPKPLVDFANKPMILHQIEALKAIGVNEVVLAINYQPEVMLNFLKEFEAKLGIKITCSQETEPLGTAGPLALARDKLIDDSGEPFFVLNSDVISEYPLKEMIEFHKTHGGEATIMVTKVDEPSKYGVVVMEETTGQVERFVEKPKLFVGNKINAGIYLLNPSVLDRIELRPTSIEKEVFPKIAAEKKLYAMVLPGFWMDIGQPKDYISGLTLYLDSLRKKSPSKLASGPHFVGNVIVHETATIGEGCLVGPDVAIGPGCVVESGVRLSRCTVMRGVRIKKHTCISNSIIGWHSTVGQWARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSNILKPEIVM*

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