Glyma.18g024700

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Report for Sequence Feature Glyma.18g024700

Feature Type:	gene_model
Chromosome:	Gm18
Start:	1830711
stop:	1836149
Source:	JGI
Version:	Wm82.a2.v1
High confidence:	yes

A previous version of this gene model can be found here:

Annotations for Glyma.18g024700

Database ID	Annotation Type	Annotation Description	Annotation Source	Match Score	Evidence Code
AT1G09870.1	AT	histidine acid phosphatase family protein	JGI	N/A	IEA
GO:0016311	GO-bp	dephosphorylation	EnsemblGenomes	N/A	IEA
GO:0003993	GO-mf	acid phosphatase activity	EnsemblGenomes	N/A	IEA
GO:0003993	GO-mf	acid phosphatase activity	JGI	N/A	IEA
GO:0016791	GO-mf	phosphatase activity	EnsemblGenomes	N/A	IEA
GO:0052745	GO-mf	inositol phosphate phosphatase activity	EnsemblGenomes	N/A	IEA
KOG1382	KOG	Multiple inositol polyphosphate phosphatase	JGI	N/A	IEA
PTHR20963	Panther	MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE-RELATED	JGI	N/A	IEA
PTHR20963:SF8	Panther	MULTIPLE INOSITOL POLYPHOSPHATE PHOSPHATASE 1	JGI	N/A	IEA
PF00328	PFAM	Histidine phosphatase superfamily (branch 2)	JGI	N/A	IEA
PWY-4702	SoyCyc9	phytate degradation I	Plant Metabolic Network		ISS
GN7V-46628	SoyCyc9-rxn	3-phytase	Plant Metabolic Network		ISS

Proteins Associated with Glyma.18g024700

Locus	Gene Symbol	Protein Name
	PAP02	multiple inositol polyphosphate phosphatase 1-like

Expression Patterns of Glyma.18g024700

Gene expression representations made with eFP at the University of Toronto.
Waese et al. 2017, Plant Cell 29(8):1806-1821 ePlant: Visualizing and Exploring Multiple Levels of Data for Hypothesis Generation in Plant Biology

Glyma.18g024700 not represented in the dataset	Glyma.18g024700 not represented in the dataset
Libault et al. 2010, Plant Phys 152(2):541-552. Complete Transcriptome of the Soybean Root Hair Cell, a Single-Cell Model, and Its Alteration in Response to Bradyrhizobium japonicum Infection	Severin et al. 2010, BMC Plant Biology 10:160 RNA-Seq Atlas of Glycine max: A guide to the soybean transcriptome

To see more experiments click HERE

Related Legume Genes

Gene families from Phytozome are displayed using the PhyloTree viewer developed by LIS.

Gene information in GlycineMine developed by LIS.

Related Plant Genes

Gene families from PhyloGenes.

Gene model name correspondences to Glyma.18g024700 Gene Call Version Wm82.a2.v1

Corresponding Name	Annotation Version	Evidence	Comments
Glyma18g02810	Wm82.a1.v1.1	IGC	As supplied by JGI

Transcripts of Glyma.18g024700

Limit To All Plant Sequences

>Glyma.18g024700.2 sequence-type=transcript locus=Glyma.18g024700 ID=Glyma.18g024700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ACAAAGCATTATATAAATGCTGACAGACTTTGACGGTAATACCAATTCGGAAGTGCAAGCGCAGAGAGAAGAATGAACAACTCTATTATGGCTTTTGTTCTGCTAATATTACTTTCGGCGTTACGCTACTCAAGCGCCGAACAAGCTTTCGATGTTCGCAAACATCTTTCCACTGTCTCCAGATATGGAGTTGTGAAAGACATCGCTGACACTAACTTCGTGCCTTCTAAAATCCCCGAGGGATGTGTTCCGATCCATTTGAATCTCGTGGCGAGGCATGGAACTCGATCTCCTACAAAGAAAAGGATAAAGGAGTTAGATAATTTGTCAGAGCGTCTGGAAGTTCTTGTAAGGGATTCAAAAGAGCGAAATTTGCCTTTCCAGAGAGTTCCTTCCTGGCTAAATGGATGGAAATCTCCTTGGCATGGAAGGCGTAAGGGCGGTGAACTAATTACCAAAGGAGAGGAAGAATTATATGATCTTGGAATCAGAATTAGAGAAAACTTTCCAAATTTGTTTGATGAGGAATACCATCCAGACATATATCCTATTAAGGCAACTCAGGTTCCCCGGGCATCTGCTAGTGCAGTCGCATTTGGAATGGGGCTTTTCAGTGGAAATGGAAGTCTTGGACCTGGGCATCACCGAGCCTTTGCTGTTACAAGCGAAAGCCGTGCTAGCGACATTGTGCTGAGATTTCATGATTGCTGTCATAATTACAAGGCTTATCGGAAAAGCCAGGAATCTGCAGTTAGTAAACTTAAGGAACCTATCTTGGATGAGATTACATCTGCCTTAATTGGGCGCCATGGGCTGAATTTTACGAGGCAGGATACATCTTCTCTCTGGTTTTTGTGTAAGCAGGAAGCATCCTTGTTGGATATAACTAATCAAGCGTGTAGTCTTTTCAGCCCTCTTGAGATTGAATTGCTGGAGTGGACAGATGATTTGGAGGTGTTTATTTTGAAGGGTTATGGTAAATCACTAAACTATAGAATGGGACTGCCATTACTTGAAGATGTTGTTCAATCCATGGAACAGGCTATCATGGCTGAAGAAGAAAGACATGTTCCTGGAAGCTTTGAAAAGGCAAGACTTCGGTTTGCGCACGCTGAAACTGTAGTTCCATTCTCATGCCTGCTTGGTTTATTTCTTGAAGGATCTGAGTTAAAAAAAATTCAGAAGGAGCAACCTTTGCAGCACCCTCCGAAGCCTCCACAGAAAAGAAAATGGCGGGGTAGCACTGTGGCCCCTTTTGCTGGTAACAACATGTTGATCTTGTATAGTTGTCCTGCTCCAGACAAATCTACCAGCAAGCACTTTGTACAAGTGTTACACAACGAACACCCTGTTCCATTGCCAGGTTGTGATGGCTCCGATTTCTGTCCATTTGAAGTATTCAAGGAAAAAATAGTTGCACCTCATCAGAAGCATGATTACCATACAGTCTGTAATGAAAAGCTAGAGCAGGAGCCCTCGGGCAACAAGGTTTTTCAAATATTTCAGTGGCTTTTCTCACCAAGGAAAGGTGATAAGTACCCTAAAAATGAACTTTAGTTTGTTTCCTAGGAAAGGAGCCTCAAATCTTACGCTCTTAATAATTCAGACATGAGCGCTTATTCCTTCTAGCAGATAATCAATTTTACTTAGATTGTGCTGCCAGTACAGGAATGCCTTTGTTATCTTAAGCTTGATGCCCGAGTCCTCCTCGTCTGTAGCTTCTAACATTAAGAGAAATTGGGGGTGGAAAGTTTAGTTCTAATTTATTTTTTTTCCTTAGTAGCGTTACTCTTAGTACTCGGCTGATACCTCAGATAATGTAGCTTGATGTGTCATACTGTGCACACTCTTAGTTTCATTAACTGTCTCTTGAACTCCATTTTTGTTCTTTTTGAATAGTAGATAATGGACCAGGTAACCTTTGACTATACTTATGTTTGTGTTTTTGTGTTTCTTGTTGCAGCTGTTGATAAATGGTACGATTTAACGAGACAAATTAGTCTAGTCATGCATGAATCGCTTCCAATAATGTTTCACGGCTTCTACCATCGGAAGCATGTGTAGGTCCCCCATCGTGGGAAAGAAATA

Coding sequences of Glyma.18g024700

Limit To All Plant Sequences

>Glyma.18g024700.1 sequence-type=CDS polypeptide=Glyma.18g024700.1.p locus=Glyma.18g024700 ID=Glyma.18g024700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAACAACTCTATTATGGCTTTTGTTCTGCTAATATTACTTTCGGCGTTACGCTACTCAAGCGCCGAACAAGCTTTCGATGTTCGCAAACATCTTTCCACTGTCTCCAGATATGGAGTTGTGAAAGACATCGCTGACACTAACTTCGTGCCTTCTAAAATCCCCGAGGGATGTGTTCCGATCCATTTGAATCTCGTGGCGAGGCATGGAACTCGATCTCCTACAAAGAAAAGGATAAAGGAGTTAGATAATTTGTCAGAGCGTCTGGAAGTTCTTGTAAGGGATTCAAAAGAGCGAAATTTGCCTTTCCAGAGAGTTCCTTCCTGGCTAAATGGATGGAAATCTCCTTGGCATGGAAGGCGTAAGGGCGGTGAACTAATTACCAAAGGAGAGGAAGAATTATATGATCTTGGAATCAGAATTAGAGAAAACTTTCCAAATTTGTTTGATGAGGAATACCATCCAGACATATATCCTATTAAGGCAACTCAGGTTCCCCGGGCATCTGCTAGTGCAGTCGCATTTGGAATGGGGCTTTTCAGTGGAAATGGAAGTCTTGGACCTGGGCATCACCGAGCCTTTGCTGTTACAAGCGAAAGCCGTGCTAGCGACATTGTGCTGAGATTTCATGATTGCTGTCATAATTACAAGGCTTATCGGAAAAGCCAGGAATCTGCAGTTAGTAAACTTAAGGAACCTATCTTGGATGAGATTACATCTGCCTTAATTGGGCGCCATGGGCTGAATTTTACGAGGCAGGATACATCTTCTCTCTGGTTTTTGTGTAAGCAGGAAGCATCCTTGTTGGATATAACTAATCAAGCGTGTAGTCTTTTCAGCCCTCTTGAGATTGAATTGCTGGAGTGGACAGATGATTTGGAGGTGTTTATTTTGAAGGGTTATGGTAAATCACTAAACTATAGAATGGGACTGCCATTACTTGAAGATGTTGTTCAATCCATGGAACAGGCTATCATGGCTGAAGAAGAAAGACATGTTCCTGGAAGCTTTGAAAAGGCAAGACTTCGGTTTGCGCACGCTGAAACTGTAGTTCCATTCTCATGCCTGCTTGGTTTATTTCTTGAAGGATCTGAGTTAAAAAAAATTCAGAAGGAGCAACCTTTGCAGCACCCTCCGAAGCCTCCACAGAAAAGAAAATGGCGGGGTAGCACTGTGGCCCCTTTTGCTGGTAACAACATGTTGATCTTGTATAGTTGTCCTGCTCCAGACAAATCTACCAGCAAGCACTTTGTACAAGTGTTACACAACGAACACCCTGTTCCATTGCCAGGTTGTGATGGCTCCGATTTCTGTCCATTTGAAGTATTCAAGGAAAAAATAGTTGCACCTCATCAGAAGCATGATTACCATACAGTCTGTAATGAAAAGCTAGAGCAGGAGCCCTCGGGCAACAAGGTTTTTCAAATATTTCAGTGGCTTTTCTCACCAAGGAAAGGTGATAAGTACCCTAAAAATGAACTTTAG

>Glyma.18g024700.2 sequence-type=CDS polypeptide=Glyma.18g024700.2.p locus=Glyma.18g024700 ID=Glyma.18g024700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
ATGAACAACTCTATTATGGCTTTTGTTCTGCTAATATTACTTTCGGCGTTACGCTACTCAAGCGCCGAACAAGCTTTCGATGTTCGCAAACATCTTTCCACTGTCTCCAGATATGGAGTTGTGAAAGACATCGCTGACACTAACTTCGTGCCTTCTAAAATCCCCGAGGGATGTGTTCCGATCCATTTGAATCTCGTGGCGAGGCATGGAACTCGATCTCCTACAAAGAAAAGGATAAAGGAGTTAGATAATTTGTCAGAGCGTCTGGAAGTTCTTGTAAGGGATTCAAAAGAGCGAAATTTGCCTTTCCAGAGAGTTCCTTCCTGGCTAAATGGATGGAAATCTCCTTGGCATGGAAGGCGTAAGGGCGGTGAACTAATTACCAAAGGAGAGGAAGAATTATATGATCTTGGAATCAGAATTAGAGAAAACTTTCCAAATTTGTTTGATGAGGAATACCATCCAGACATATATCCTATTAAGGCAACTCAGGTTCCCCGGGCATCTGCTAGTGCAGTCGCATTTGGAATGGGGCTTTTCAGTGGAAATGGAAGTCTTGGACCTGGGCATCACCGAGCCTTTGCTGTTACAAGCGAAAGCCGTGCTAGCGACATTGTGCTGAGATTTCATGATTGCTGTCATAATTACAAGGCTTATCGGAAAAGCCAGGAATCTGCAGTTAGTAAACTTAAGGAACCTATCTTGGATGAGATTACATCTGCCTTAATTGGGCGCCATGGGCTGAATTTTACGAGGCAGGATACATCTTCTCTCTGGTTTTTGTGTAAGCAGGAAGCATCCTTGTTGGATATAACTAATCAAGCGTGTAGTCTTTTCAGCCCTCTTGAGATTGAATTGCTGGAGTGGACAGATGATTTGGAGGTGTTTATTTTGAAGGGTTATGGTAAATCACTAAACTATAGAATGGGACTGCCATTACTTGAAGATGTTGTTCAATCCATGGAACAGGCTATCATGGCTGAAGAAGAAAGACATGTTCCTGGAAGCTTTGAAAAGGCAAGACTTCGGTTTGCGCACGCTGAAACTGTAGTTCCATTCTCATGCCTGCTTGGTTTATTTCTTGAAGGATCTGAGTTAAAAAAAATTCAGAAGGAGCAACCTTTGCAGCACCCTCCGAAGCCTCCACAGAAAAGAAAATGGCGGGGTAGCACTGTGGCCCCTTTTGCTGGTAACAACATGTTGATCTTGTATAGTTGTCCTGCTCCAGACAAATCTACCAGCAAGCACTTTGTACAAGTGTTACACAACGAACACCCTGTTCCATTGCCAGGTTGTGATGGCTCCGATTTCTGTCCATTTGAAGTATTCAAGGAAAAAATAGTTGCACCTCATCAGAAGCATGATTACCATACAGTCTGTAATGAAAAGCTAGAGCAGGAGCCCTCGGGCAACAAGGTTTTTCAAATATTTCAGTGGCTTTTCTCACCAAGGAAAGGTGATAAGTACCCTAAAAATGAACTTTAG

Predicted protein sequences of Glyma.18g024700

Limit To All Plant Sequences

>Glyma.18g024700.1.p sequence-type=predicted peptide transcript=Glyma.18g024700.1 locus=Glyma.18g024700 ID=Glyma.18g024700.1.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNNSIMAFVLLILLSALRYSSAEQAFDVRKHLSTVSRYGVVKDIADTNFVPSKIPEGCVPIHLNLVARHGTRSPTKKRIKELDNLSERLEVLVRDSKERNLPFQRVPSWLNGWKSPWHGRRKGGELITKGEEELYDLGIRIRENFPNLFDEEYHPDIYPIKATQVPRASASAVAFGMGLFSGNGSLGPGHHRAFAVTSESRASDIVLRFHDCCHNYKAYRKSQESAVSKLKEPILDEITSALIGRHGLNFTRQDTSSLWFLCKQEASLLDITNQACSLFSPLEIELLEWTDDLEVFILKGYGKSLNYRMGLPLLEDVVQSMEQAIMAEEERHVPGSFEKARLRFAHAETVVPFSCLLGLFLEGSELKKIQKEQPLQHPPKPPQKRKWRGSTVAPFAGNNMLILYSCPAPDKSTSKHFVQVLHNEHPVPLPGCDGSDFCPFEVFKEKIVAPHQKHDYHTVCNEKLEQEPSGNKVFQIFQWLFSPRKGDKYPKNEL*

>Glyma.18g024700.2.p sequence-type=predicted peptide transcript=Glyma.18g024700.2 locus=Glyma.18g024700 ID=Glyma.18g024700.2.Wm82.a2.v1 annot-version=Wm82.a2.v1
MNNSIMAFVLLILLSALRYSSAEQAFDVRKHLSTVSRYGVVKDIADTNFVPSKIPEGCVPIHLNLVARHGTRSPTKKRIKELDNLSERLEVLVRDSKERNLPFQRVPSWLNGWKSPWHGRRKGGELITKGEEELYDLGIRIRENFPNLFDEEYHPDIYPIKATQVPRASASAVAFGMGLFSGNGSLGPGHHRAFAVTSESRASDIVLRFHDCCHNYKAYRKSQESAVSKLKEPILDEITSALIGRHGLNFTRQDTSSLWFLCKQEASLLDITNQACSLFSPLEIELLEWTDDLEVFILKGYGKSLNYRMGLPLLEDVVQSMEQAIMAEEERHVPGSFEKARLRFAHAETVVPFSCLLGLFLEGSELKKIQKEQPLQHPPKPPQKRKWRGSTVAPFAGNNMLILYSCPAPDKSTSKHFVQVLHNEHPVPLPGCDGSDFCPFEVFKEKIVAPHQKHDYHTVCNEKLEQEPSGNKVFQIFQWLFSPRKGDKYPKNEL*

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