Report for Sequence Feature Glyma.18g022500
| Feature Type: | gene_model |
| Chromosome: | Gm18 |
| Start: | 1639181 |
| stop: | 1643814 |
| Source: | JGI |
| Version: | Wm82.a4.v1 |
| High confidence: | yes |
| 
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Annotations for Glyma.18g022500
| Database ID | Annotation Type | Annotation Description | Annotation Source | Match Score | Evidence Code |
|---|
| AT3G56190.1 | AT |
ALPHA-SNAP2,ASNAP |
JGI | N/A | IEA |
| GO:0006886 | GO-bp |
intracellular protein transport |
JGI | N/A | IEA |
| K15296 | KEGG |
Membrane trafficking |
JGI | N/A | IEA |
| KOG1586 |
KOG |
Protein required for fusion of vesicles in vesicular transport, alpha-SNAP |
JGI | N/A | IEA |
| PTHR13768 | PantherFam |
SOLUBLE NSF ATTACHMENT PROTEIN SNAP |
JGI | N/A | IEA |
| PTHR13768:SF8 | PantherFam |
ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN |
JGI | N/A | IEA |
| PF14938 | Pfam |
Soluble NSF attachment protein, SNAP |
JGI | N/A | IEA |
Proteins Associated with Glyma.18g022500
| Locus | Gene Symbol | Protein Name |
|---|
| | SNAP18 | soluble NSF attachment protein SNAP18 |
| | SNAP18 | Soluble N-Ethylmaleimide Sensitive Factor attachement protein |
| | Rhg1 | Alpha Soluble n-ethylmaleimide sensitive fusion protein Attachment Protein |
Gene model name correspondences to Glyma.18g022500 Gene Call Version Wm82.a4.v1
| Corresponding Name | Annotation Version | Evidence | Comments |
|---|
| Glyma18g02590 | Wm82.a1.v1.1 | IGC | As supplied by JGI |
Coding sequences of Glyma.18g022500
>Glyma.18g022500.1 sequence-type=CDS polypeptide=Glyma.18g022500.1.p locus=Glyma.18g022500 id=Glyma.18g022500.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCCGATCAGTTATCGAAGGGAGAGGAATTCGAGAAAAAGGCTGAGAAGAAGCTCAGCGGTTGGGGCTTGTTTGGCTCCAAGTATGAAGATGCCGCCGATCTCTTCGATAAAGCCGCCAATTGCTTCAAGCTCGCCAAATCATGGGACAAGGCTGGAGCGACATACCTGAAGTTGGCAAGTTGTCATTTGAAGTTGGAAAGCAAGCATGAAGCTGCACAGGCCCATGTCGATGCTGCACATTGCTACAAAAAGACTAATATAAACGAGTCTGTATCTTGCTTAGACCGAGCTGTAAATCTTTTCTGTGACATTGGAAGACTCTCTATGGCTGCTAGATATTTAAAGGAAATTGCTGAATTGTACGAGGGTGAACAGAATATTGAGCAGGCTCTTGTTTACTATGAAAAATCAGCTGATTTTTTTCAAAATGAAGAAGTGACAACTTCTGCGAACCAATGCAAACAAAAAGTTGCCCAGTTTGCTGCTCAGCTAGAACAATATCAGAAGTCGATTGACATTTATGAAGAGATAGCTCGCCAATCCCTCAACAATAATTTGCTGAAGTATGGAGTTAAAGGACACCTTCTTAATGCTGGCATCTGCCAACTCTGTAAAGAGGACGTTGTTGCTATAACCAATGCATTAGAACGATATCAGGAACTGGATCCAACATTTTCAGGAACACGTGAATATAGATTGTTGGCGGACATTGCTGCTGCAATTGATGAAGAAGATGTTGCAAAGTTTACTGATGTTGTCAAGGAATTTGATAGTATGACCCCTCTGGATTCTTGGAAGACCACACTTCTCTTAAGGGTGAAGGAAAAGCTGAAAGCCAAAGAACTTGAGGAGGATGATCTTACTTGA
Predicted protein sequences of Glyma.18g022500
>Glyma.18g022500.1.p sequence-type=predicted peptide transcript=Glyma.18g022500.1 locus=Glyma.18g022500 id=Glyma.18g022500.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MADQLSKGEEFEKKAEKKLSGWGLFGSKYEDAADLFDKAANCFKLAKSWDKAGATYLKLASCHLKLESKHEAAQAHVDAAHCYKKTNINESVSCLDRAVNLFCDIGRLSMAARYLKEIAELYEGEQNIEQALVYYEKSADFFQNEEVTTSANQCKQKVAQFAAQLEQYQKSIDIYEEIARQSLNNNLLKYGVKGHLLNAGICQLCKEDVVAITNALERYQELDPTFSGTREYRLLADIAAAIDEEDVAKFTDVVKEFDSMTPLDSWKTTLLLRVKEKLKAKELEEDDLT*
SoyBase
SoyBase transitions to NEW site on 10/1/2024
