SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g019700

Feature Type:gene_model
Chromosome:Gm18
Start:1459041
stop:1463695
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g019700
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT4G39680.2AT JGI N/AIEA
K12875KEGG Spliceosome JGI N/AIEA
KOG2416 KOG Acinus (induces apoptotic chromatin condensation) JGI N/AIEA
PF02037Pfam SAP domain JGI N/AIEA
PF16294Pfam RNSP1-SAP18 binding (RSB) motif JGI N/AIEA

Gene model name correspondences to Glyma.18g019700 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g02310 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g019700
>Glyma.18g019700.1 sequence-type=CDS polypeptide=Glyma.18g019700.1.p locus=Glyma.18g019700 id=Glyma.18g019700.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGTCAAAATATCAGATTCTTGACAACCGCCCTATTAATCAGTGGAAGGTTACAGAGCTAAAAGATGAGCTGAAGAGGAGGAAGTTAAGTATCAAGGGTTTGAAGGATGATTTGGTCAAGCGTTTGGATGAAGTCCTTCGTCTTGAAAGGGAGGCTGACGAGGCTTCTGAGAAGGATGAGGCCAATGGTTTCGATGGTCATGTAGATGGGGAAAAAGATTCAGAGGCGGTTACTGTGGATGCTGAAATGGTTGATTCAACTGACAGGGACAATGCCAAAACATTTGAGACTGCTGAAAAGGGCAAGAGCGGTGTAGTTGATCCTGTTGAAATAGAAAATGTGGAAAAGATTCCGGAGGTTGTGGATCACGACAGCAATAAGAATGACAAGCAGGATGGTGTTACCAACCAAGTTGACATTAATAATAGTGTGTCAGCCATAGATCAAGAGGTTGAACCTAAGGGCTTGCCAGCTGGTGGAGATTCTGCAAATGTGGGACAGGAGGCAATTGCCCATGGTTCTACTGTGGAGAAGACTACCATTACAGTTAATGAGAGTGTAGTAACAGAAGTAGTGGCCAGTGCTGAGGATTCTTATCGTGCAGAAAAGAATAATGAGGATTCAGCAGCAAAGCTGGAGAATGAGGAGTCAAAGGCGCAGCTGGATGGTGAGGACTCAAAGCCCCAGCTGGATTGTGACATCAAGCCCTTGCATGAGGATCCTGTGCCCGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGAGGGCTGCATGAGAAAAAGGCATCTGTTGAAGAAAATTTCAATAATGTTTTAAGTCCAGACATGAACAAGACCAATAGCAGCGATGATGTGGGGTATCCCGAAGAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCTATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAAAGACAAAATAGAGATTGAAGAGCCTATTGTGAAGGAGGAAAGTAGTACTATAGCTGTTGGAGATGGTCTGTCTGCAGGAGAAAGTGATATCCACCAAGATATTGACATTAGTCCAGTTGCTCCAACAGAGAAACGAAAATTTAATGAACAAGCATCAGTTGGGAACAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATGCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATTGCTTTGAAACGCAACTTCTCTAGGTCTGATTCCTCTGCAACTGATGATACACCTAAAGAACGCATTGTTCCACCACCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGTTTTCTCCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGTAAGACTGGGAATGTCAGCAGCTTCTGGATGGACCAAATAAAGACCCATTGCTATGTGACTTACTCGTCTGTGGATGAAGCCATTGAGACACGGAATGCTGTATATAATTTGCAATGGCCACCAAATGGTGGGCGTCTCTTAGTTGCTGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTCCTACTCAGGCTGCATCTGTCAGCACTGTCCCAGCAGTTCCTCCTGCACCTCCCTCACAGCCAGAGCCTTCCCCTCGTCTGCACAGGGAGCCGCATCCAGTTCCAGCTACTCTCCCACCTCCACCACCATTGTCAAAACCCCCACCAGTAGCAAGAGAACGGCTTCCATCTCCACCACCCCTTCCTGAGAAAGTTGACCCACCCATTGTCACTCTGGATGATCTCTTTCGCAAAACCACAGCCACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGCAAGTTGCCTCAAAACTTACAGCACAGGGTAAAAGCGCGAGGCAGTAG

>Glyma.18g019700.2 sequence-type=CDS polypeptide=Glyma.18g019700.2.p locus=Glyma.18g019700 id=Glyma.18g019700.2.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGTCAAAATATCAGATTCTTGACAACCGCCCTATTAATCAGTGGAAGGTTACAGAGCTAAAAGATGAGCTGAAGAGGAGGAAGTTAAGTATCAAGGGTTTGAAGGATGATTTGGTCAAGCGTTTGGATGAAGTCCTTCGTCTTGAAAGGGAGGCTGACGAGGCTTCTGAGAAGGATGAGGCCAATGGTTTCGATGGTCATGTAGATGGGGAAAAAGATTCAGAGGCGGTTACTGTGGATGCTGAAATGGTTGATTCAACTGACAGGGACAATGCCAAAACATTTGAGACTGCTGAAAAGGGCAAGAGCGGTGTAGTTGATCCTGTTGAAATAGAAAATGTGGAAAAGATTCCGGAGGTTGTGGATCACGACAGCAATAAGAATGACAAGCAGGATGGTGTTACCAACCAAGTTGACATTAATAATAGTGTGTCAGCCATAGATCAAGAGGTTGAACCTAAGGGCTTGCCAGCTGGTGGAGATTCTGCAAATGTGGGACAGGAGGCAATTGCCCATGGTTCTACTGTGGAGAAGACTACCATTACAGTTAATGAGAGTGTAGTAACAGAAGTAGTGGCCAGTGCTGAGGATTCTTATCGTGCAGAAAAGAATAATGAGGATTCAGCAGCAAAGCTGGAGAATGAGGAGTCAAAGGCGCAGCTGGATGGTGAGGACTCAAAGCCCCAGCTGGATTGTGACATCAAGCCCTTGCATGAGGATCCTGTGCCCGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGAGGGCTGCATGAGAAAAAGGCATCTGTTGAAGAAAATTTCAATAATGTTTTAAGTCCAGACATGAACAAGACCAATAGCAGCGATGATGTGGGGTATCCCGAAGAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCTATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAAAGACAAAATAGAGATTGAAGAGCCTATTGTGAAGGAGGAAAGTAGTACTATAGCTGTTGGAGATGGTCTGTCTGCAGGAGAAAGTGATATCCACCAAGATATTGACATTAGTCCAGTTGCTCCAACAGAGAAACGAAAATTTAATGAACAAGCATCAGTTGGGAACAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATGCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATTGCTTTGAAACGCAACTTCTCTAGGTCTGATTCCTCTGCAACTGATGATACACCTAAAGAACGCATTGTTCCACCACCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGTTTTCTCCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGTAAGACTGGGAATGTCAGCAGCTTCTGGATGGACCAAATAAAGACCCATTGCTATGTGACTTACTCGTCTGTGGATGAAGCCATTGAGACACGGAATGCTGTATATAATTTGCAATGGCCACCAAATGGTGGGCGTCTCTTAGTTGCTGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTCCTACTCAGGCTGCATCTGTCAGCACTGTCCCAGCAGTTCCTCCTGCACCTCCCTCACAGCCAGAGCCTTCCCCTCGTCTGCACAGGGAGCCGCATCCAGTTCCAGCTACTCTCCCACCTCCACCACCATTGTCAAAACCCCCACCAGTAGCAAGAGAACGGCTTCCATCTCCACCACCCCTTCCTGAGAAAGTTGACCCACCCATTGTCACTCTGGATGATCTCTTTCGCAAAACCACAGCCACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGCAAGTTGCCTCAAAACTTACAGCACAGGGTAAAAGCGCGAGGCAGTAG

>Glyma.18g019700.3 sequence-type=CDS polypeptide=Glyma.18g019700.3.p locus=Glyma.18g019700 id=Glyma.18g019700.3.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGTCGTCAAAATATCAGATTCTTGACAACCGCCCTATTAATCAGTGGAAGGTTACAGAGCTAAAAGATGAGCTGAAGAGGAGGAAGTTAAGTATCAAGGGTTTGAAGGATGATTTGGTCAAGCGTTTGGATGAAGTCCTTCGTCTTGAAAGGGAGGCTGACGAGGCTTCTGAGAAGGATGAGGCCAATGGTTTCGATGGTCATGTAGATGGGGAAAAAGATTCAGAGGCGGTTACTGTGGATGCTGAAATGGTTGATTCAACTGACAGGGACAATGCCAAAACATTTGAGACTGCTGAAAAGGGCAAGAGCGGTGTAGTTGATCCTGTTGAAATAGAAAATGTGGAAAAGATTCCGGAGGTTGTGGATCACGACAGCAATAAGAATGACAAGCAGGATGGTGTTACCAACCAAGTTGACATTAATAATAGTGTGTCAGCCATAGATCAAGAGGTTGAACCTAAGGGCTTGCCAGCTGGTGGAGATTCTGCAAATGTGGGACAGGAGGCAATTGCCCATGGTTCTACTGTGGAGAAGACTACCATTACAGTTAATGAGAGTGTAGTAACAGAAGTAGTGGCCAGTGCTGAGGATTCTTATCGTGCAGAAAAGAATAATGAGGATTCAGCAGCAAAGCTGGAGAATGAGGAGTCAAAGGCGCAGCTGGATGGTGAGGACTCAAAGCCCCAGCTGGATTGTGACATCAAGCCCTTGCATGAGGATCCTGTGCCCGACTCTTCTGTTCCAGAAAACCAGGTATCTGAGGTCAACCCTAGTTTAGGGTCTCAAGTAAAATCTGATTCTATTTCTACTGATTCTCTGTCAATTAATCAAAAGAATGAACTAAAGGATACTATAATTACTGATAATGTCAAATTAGAACAAGATATTGTTAAGCCAGAGATGGTGGAAGAACCATCATCCAGAAATGATGTACCTGTTTCTTATGATGAATCACATTCAATGGATGTTGGAGGGCTGCATGAGAAAAAGGCATCTGTTGAAGAAAATTTCAATAATGTTTTAAGTCCAGACATGAACAAGACCAATAGCAGCGATGATGTGGGGTATCCCGAAGAGTTGAACTTGGACAGAAGTTCTGGTGATGATTCTATGGAAGAGGATTTGCCTGAGACTAAGCAAATTGATTCTAAGTTTAATGTTGATGAACTTAAAGACAAAATAGAGATTGAAGAGCCTATTGTGAAGGAGGAAAGTAGTACTATAGCTGTTGGAGATGGTCTGTCTGCAGGAGAAAGTGATATCCACCAAGATATTGACATTAGTCCAGTTGCTCCAACAGAGAAACGAAAATTTAATGAACAAGCATCAGTTGGGAACAATGAGCCTGCAAAAAGGCAACGCAGGTGGAACACTGAAACAGTTAAAGGTCCAGATGCACAAAGCACTACTCCCAGGCCTGCTACTACACCTAGAGATGAGCCAATTGCTTTGAAACGCAACTTCTCTAGGTCTGATTCCTCTGCAACTGATGATACACCTAAAGAACGCATTGTTCCACCACCACAAAGGTCCCCAACTAATTCCCTCAGGATTGATCGTTTTCTCCGTCCATTTACCCTAAAAGCAGTGCAAGAACTTCTTGGTAAGACTGGGAATGTCAGCAGCTTCTGGATGGACCAAATAAAGACCCATTGCTATGTGACTTACTCGTCTGTGGATGAAGCCATTGAGACACGGAATGCTGTATATAATTTGCAATGGCCACCAAATGGTGGGCGTCTCTTAGTTGCTGAGTATGTTGATCCTGAAGAAGTGAAAATGAAGTTAGAACCTCCTCCTACTCAGGCTGCATCTGTCAGCACTGTCCCAGCAGTTCCTCCTGCACCTCCCTCACAGCCAGAGCCTTCCCCTCGTCTGCACAGGGAGCCGCATCCAGTTCCAGCTACTCTCCCACCTCCACCACCATTGTCAAAACCCCCACCAGTAGCAAGAGAACGGCTTCCATCTCCACCACCCCTTCCTGAGAAAGTTGACCCACCCATTGTCACTCTGGATGATCTCTTTCGCAAAACCACAGCCACTCCTCGGATCTACTATCTACCTTTGTCTGAAGAGCAAGTTGCCTCAAAACTTACAGCACAGGGTAAAAGCGCGAGGCAGTAG
Predicted protein sequences of Glyma.18g019700
>Glyma.18g019700.1.p sequence-type=predicted peptide transcript=Glyma.18g019700.1 locus=Glyma.18g019700 id=Glyma.18g019700.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSKYQILDNRPINQWKVTELKDELKRRKLSIKGLKDDLVKRLDEVLRLEREADEASEKDEANGFDGHVDGEKDSEAVTVDAEMVDSTDRDNAKTFETAEKGKSGVVDPVEIENVEKIPEVVDHDSNKNDKQDGVTNQVDINNSVSAIDQEVEPKGLPAGGDSANVGQEAIAHGSTVEKTTITVNESVVTEVVASAEDSYRAEKNNEDSAAKLENEESKAQLDGEDSKPQLDCDIKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENFNNVLSPDMNKTNSSDDVGYPEELNLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKIEIEEPIVKEESSTIAVGDGLSAGESDIHQDIDISPVAPTEKRKFNEQASVGNNEPAKRQRRWNTETVKGPDAQSTTPRPATTPRDEPIALKRNFSRSDSSATDDTPKERIVPPPQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSVDEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQAASVSTVPAVPPAPPSQPEPSPRLHREPHPVPATLPPPPPLSKPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVASKLTAQGKSARQ*

>Glyma.18g019700.2.p sequence-type=predicted peptide transcript=Glyma.18g019700.2 locus=Glyma.18g019700 id=Glyma.18g019700.2.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSKYQILDNRPINQWKVTELKDELKRRKLSIKGLKDDLVKRLDEVLRLEREADEASEKDEANGFDGHVDGEKDSEAVTVDAEMVDSTDRDNAKTFETAEKGKSGVVDPVEIENVEKIPEVVDHDSNKNDKQDGVTNQVDINNSVSAIDQEVEPKGLPAGGDSANVGQEAIAHGSTVEKTTITVNESVVTEVVASAEDSYRAEKNNEDSAAKLENEESKAQLDGEDSKPQLDCDIKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENFNNVLSPDMNKTNSSDDVGYPEELNLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKIEIEEPIVKEESSTIAVGDGLSAGESDIHQDIDISPVAPTEKRKFNEQASVGNNEPAKRQRRWNTETVKGPDAQSTTPRPATTPRDEPIALKRNFSRSDSSATDDTPKERIVPPPQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSVDEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQAASVSTVPAVPPAPPSQPEPSPRLHREPHPVPATLPPPPPLSKPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVASKLTAQGKSARQ*

>Glyma.18g019700.3.p sequence-type=predicted peptide transcript=Glyma.18g019700.3 locus=Glyma.18g019700 id=Glyma.18g019700.3.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MSSKYQILDNRPINQWKVTELKDELKRRKLSIKGLKDDLVKRLDEVLRLEREADEASEKDEANGFDGHVDGEKDSEAVTVDAEMVDSTDRDNAKTFETAEKGKSGVVDPVEIENVEKIPEVVDHDSNKNDKQDGVTNQVDINNSVSAIDQEVEPKGLPAGGDSANVGQEAIAHGSTVEKTTITVNESVVTEVVASAEDSYRAEKNNEDSAAKLENEESKAQLDGEDSKPQLDCDIKPLHEDPVPDSSVPENQVSEVNPSLGSQVKSDSISTDSLSINQKNELKDTIITDNVKLEQDIVKPEMVEEPSSRNDVPVSYDESHSMDVGGLHEKKASVEENFNNVLSPDMNKTNSSDDVGYPEELNLDRSSGDDSMEEDLPETKQIDSKFNVDELKDKIEIEEPIVKEESSTIAVGDGLSAGESDIHQDIDISPVAPTEKRKFNEQASVGNNEPAKRQRRWNTETVKGPDAQSTTPRPATTPRDEPIALKRNFSRSDSSATDDTPKERIVPPPQRSPTNSLRIDRFLRPFTLKAVQELLGKTGNVSSFWMDQIKTHCYVTYSSVDEAIETRNAVYNLQWPPNGGRLLVAEYVDPEEVKMKLEPPPTQAASVSTVPAVPPAPPSQPEPSPRLHREPHPVPATLPPPPPLSKPPPVARERLPSPPPLPEKVDPPIVTLDDLFRKTTATPRIYYLPLSEEQVASKLTAQGKSARQ*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo