SoyBase SoyBase transitions to NEW site on 10/1/2024
Integrating Genetics and Genomics to Advance Soybean Research

Report for Sequence Feature Glyma.18g011100

Feature Type:gene_model
Chromosome:Gm18
Start:784987
stop:787159
Source:JGI
Version:Wm82.a4.v1
High confidence:yes



Annotations for Glyma.18g011100
Database IDAnnotation TypeAnnotation DescriptionAnnotation SourceMatch ScoreEvidence Code
AT1G24440.1AT JGI N/AIEA
KOG1039 KOG Predicted E3 ubiquitin ligase JGI N/AIEA
PTHR15315PantherFam RING FINGER PROTEIN 41, 151 JGI N/AIEA
PTHR15315:SF35PantherFam RING-TYPE DOMAIN-CONTAINING PROTEIN JGI N/AIEA
PF13920Pfam Zinc finger, C3HC4 type (RING finger) JGI N/AIEA

Gene model name correspondences to Glyma.18g011100 Gene Call Version Wm82.a4.v1
Corresponding NameAnnotation VersionEvidenceComments
Glyma18g01460 Wm82.a1.v1.1IGC As supplied by JGI


Coding sequences of Glyma.18g011100
>Glyma.18g011100.1 sequence-type=CDS polypeptide=Glyma.18g011100.1.p locus=Glyma.18g011100 id=Glyma.18g011100.1.Wm82.a4.v1 annot-version=Wm82.a4.v1
ATGGCAATGATTCCTTACCACCTTTGCCGTTTACCTTACCAGGATTCCCTCAAAGCACTTGAGGCTGATATACAGCACGCCAATGCTTTGGCTGCTGCAATTCCCAGAGCCAAGGGTGAGACTCTTCTTCAAATGAAATTGGTTTACAATCACTTGGCTCCCCTCTTCCTGTTATTTCTACAATGGATGGATTGTTCTTGTGCAGGCTTTCTCCATAGGTATCTCGACCTCTTCCACATACTTATTTACAAGGTACATAATGATGGTAGATCAATCATGCCTACTCATGGAAGGAAGGCTACCATTGGGGACTTTTATGCTGTTATATTACCATCTCTCCAACGGCTTCATGGTAGTTTGGAGAAGTTGGAGGTTGTTAAAGAAGAAGGCCAGTCAAGCATAGAAGGTCCAAGTTATGGCAAGAAGGTCATTGAAGAAGGTGTGAAACTAACGGCCAATGTTGATTTGCAAAGAGAAGATGAATGTGGGATTTGCTTAGAGCCTTGCACCAAAATGGTTTTACCTGGTTGCTGCCATGCCATGTGTATTAAATGCTACCGCAAGTGGAACAGAAAGTCAGAGTCTTGTCCTTTTTGCCGTGGTAGCTTGAGGAGAGTTAATTCGGAGGATCTATGGGTATTAACTTGTAATGATGATGTTGTTGATGCTGAAACAGTTTCTAAAGAGGACTTGTTGCGTTTTTATCTCTATGTCAGCAAGCTGCCTAAAGATCACCCAGATGCACTTTTCCTAATGTATTATGAATACCTCATTTAA
Predicted protein sequences of Glyma.18g011100
>Glyma.18g011100.1.p sequence-type=predicted peptide transcript=Glyma.18g011100.1 locus=Glyma.18g011100 id=Glyma.18g011100.1.p.Wm82.a4.v1 annot-version=Wm82.a4.v1
MAMIPYHLCRLPYQDSLKALEADIQHANALAAAIPRAKGETLLQMKLVYNHLAPLFLLFLQWMDCSCAGFLHRYLDLFHILIYKVHNDGRSIMPTHGRKATIGDFYAVILPSLQRLHGSLEKLEVVKEEGQSSIEGPSYGKKVIEEGVKLTANVDLQREDECGICLEPCTKMVLPGCCHAMCIKCYRKWNRKSESCPFCRGSLRRVNSEDLWVLTCNDDVVDAETVSKEDLLRFYLYVSKLPKDHPDALFLMYYEYLI*






Funded by the USDA-ARS. Developed by the USDA-ARS SoyBase and Legume Clade Database group at the Iowa State University, Ames, IA
 
USDA Logo
Iowa State University Logo